RNA–Protein interactions for RNA: ENST00000317702.9

TUBB6-201, Transcript of tubulin beta 6 class V, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB6, Length 2,064 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-201ENST00000317702 NSD3Q9BZ95 1437 aa37.96■■■■□ 3.67
TUBB6-201ENST00000317702 SETD1AO15047 1707 aaKnown RBP37.94■■■■□ 3.66
TUBB6-201ENST00000317702 PRAM1Q96QH2 718 aa37.93■■■■□ 3.66
TUBB6-201ENST00000317702 SALL2Q9Y467 1007 aaPredicted RBP37.93■■■■□ 3.66
TUBB6-201ENST00000317702 CABP2Q9NPB3 220 aa37.91■■■■□ 3.66
TUBB6-201ENST00000317702 NRXN3Q9Y4C0 1643 aa37.89■■■■□ 3.66
TUBB6-201ENST00000317702 POGKQ9P215 609 aa37.87■■■■□ 3.65
TUBB6-201ENST00000317702 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.86■■■■□ 3.65
TUBB6-201ENST00000317702 MINK1Q8N4C8 1332 aaPredicted RBP37.86■■■■□ 3.65
TUBB6-201ENST00000317702 USP32Q8NFA0 1604 aa37.85■■■■□ 3.65
TUBB6-201ENST00000317702 ADAMTS8Q9UP79 889 aa37.84■■■■□ 3.65
TUBB6-201ENST00000317702 ANKRD36BQ8N2N9 1353 aa37.83■■■■□ 3.65
TUBB6-201ENST00000317702 UBR1Q8IWV7 1749 aa37.83■■■■□ 3.65
TUBB6-201ENST00000317702 DLC1Q96QB1 1528 aa37.83■■■■□ 3.65
TUBB6-201ENST00000317702 RCAN3Q9UKA8 241 aa37.81■■■■□ 3.64
TUBB6-201ENST00000317702 SRPK2P78362 688 aaKnown RBP37.8■■■■□ 3.64
TUBB6-201ENST00000317702 RRP1P56182 461 aaKnown RBP37.79■■■■□ 3.64
TUBB6-201ENST00000317702 WDR43Q15061 677 aaKnown RBP eCLIP37.79■■■■□ 3.64
TUBB6-201ENST00000317702 CDCA7LQ96GN5 454 aa37.77■■■■□ 3.64
TUBB6-201ENST00000317702 TMEM2Q9UHN6 1383 aa37.77■■■■□ 3.64
TUBB6-201ENST00000317702 CEBPAP49715 358 aaPredicted RBP37.76■■■■□ 3.64
TUBB6-201ENST00000317702 NINLQ9Y2I6 1382 aa37.76■■■■□ 3.64
TUBB6-201ENST00000317702 METP08581 1390 aa37.75■■■■□ 3.63
TUBB6-201ENST00000317702 ABCC11Q96J66 1382 aa37.75■■■■□ 3.63
TUBB6-201ENST00000317702 ATAD2Q6PL18 1390 aa37.74■■■■□ 3.63
TUBB6-201ENST00000317702 CCDC136Q96JN2 1154 aa37.74■■■■□ 3.63
TUBB6-201ENST00000317702 CGNL1Q0VF96 1302 aa37.73■■■■□ 3.63
TUBB6-201ENST00000317702 MORC1Q86VD1 984 aa37.73■■■■□ 3.63
TUBB6-201ENST00000317702 PLEKHH1Q9ULM0 1364 aa37.73■■■■□ 3.63
TUBB6-201ENST00000317702 HDGFP51858 240 aaKnown RBP37.73■■■■□ 3.63
TUBB6-201ENST00000317702 NLRP1Q9C000 1473 aa37.72■■■■□ 3.63
TUBB6-201ENST00000317702 WAPLQ7Z5K2 1190 aa37.72■■■■□ 3.63
TUBB6-201ENST00000317702 C3P01024 1663 aa37.71■■■■□ 3.63
TUBB6-201ENST00000317702 A0A1W2PP64 1363 aa37.71■■■■□ 3.63
TUBB6-201ENST00000317702 CDK19Q9BWU1 502 aa37.69■■■■□ 3.62
TUBB6-201ENST00000317702 FER1L4A9Z1Z3 1794 aa37.68■■■■□ 3.62
TUBB6-201ENST00000317702 CD163L1Q9NR16 1453 aa37.66■■■■□ 3.62
TUBB6-201ENST00000317702 POLR3AO14802 1390 aaPredicted RBP37.66■■■■□ 3.62
TUBB6-201ENST00000317702 NSD2O96028 1365 aa37.65■■■■□ 3.62
TUBB6-201ENST00000317702 TNNT2P45379 298 aaPredicted RBP37.64■■■■□ 3.62
TUBB6-201ENST00000317702 KNDC1Q76NI1 1749 aa37.62■■■■□ 3.61
TUBB6-201ENST00000317702 MYT1Q01538 1121 aa37.6■■■■□ 3.61
TUBB6-201ENST00000317702 ADAMTS13Q76LX8 1427 aa37.59■■■■□ 3.61
TUBB6-201ENST00000317702 TECPR2O15040 1411 aa37.59■■■■□ 3.61
TUBB6-201ENST00000317702 LTKP29376 864 aa37.58■■■■□ 3.61
TUBB6-201ENST00000317702 TXNDC2Q86VQ3 553 aa37.57■■■■□ 3.61
TUBB6-201ENST00000317702 TERF2IPQ9NYB0 399 aa37.57■■■■□ 3.61
TUBB6-201ENST00000317702 PLPPR3Q6T4P5 718 aa37.57■■■■□ 3.6
TUBB6-201ENST00000317702 FANCIQ9NVI1 1328 aa37.56■■■■□ 3.6
TUBB6-201ENST00000317702 PLEKHG1Q9ULL1 1385 aa37.56■■■■□ 3.6
TUBB6-201ENST00000317702 CPS1P31327 1500 aa37.56■■■■□ 3.6
TUBB6-201ENST00000317702 FAM135BQ49AJ0 1406 aa37.55■■■■□ 3.6
TUBB6-201ENST00000317702 EXOC6Q8TAG9 804 aa37.55■■■■□ 3.6
TUBB6-201ENST00000317702 ZNF521Q96K83 1311 aa37.55■■■■□ 3.6
TUBB6-201ENST00000317702 SHPRHQ149N8 1683 aa37.54■■■■□ 3.6
TUBB6-201ENST00000317702 CCDC146Q8IYE0 955 aa37.54■■■■□ 3.6
TUBB6-201ENST00000317702 CABP1Q9NZU7 370 aa37.54■■■■□ 3.6
TUBB6-201ENST00000317702 SIRT1Q96EB6 747 aa37.53■■■■□ 3.6
TUBB6-201ENST00000317702 SLIT1O75093 1534 aa37.5■■■■□ 3.59
TUBB6-201ENST00000317702 MTHFSP49914 203 aa37.49■■■■□ 3.59
TUBB6-201ENST00000317702 HDGFL2Q7Z4V5 671 aaPredicted RBP37.49■■■■□ 3.59
TUBB6-201ENST00000317702 ARHGAP23Q9P227 1491 aa37.49■■■■□ 3.59
TUBB6-201ENST00000317702 WASLO00401 505 aaPredicted RBP37.48■■■■□ 3.59
TUBB6-201ENST00000317702 GGNBP2Q9H3C7 697 aa37.48■■■■□ 3.59
TUBB6-201ENST00000317702 GOLGA2Q08379 1002 aa37.46■■■■□ 3.59
TUBB6-201ENST00000317702 MED14O60244 1454 aa37.46■■■■□ 3.59
TUBB6-201ENST00000317702 FYB1O15117 783 aa37.45■■■■□ 3.59
TUBB6-201ENST00000317702 DUSP27Q5VZP5 1158 aa37.45■■■■□ 3.59
TUBB6-201ENST00000317702 ATP7BP35670 1465 aa37.45■■■■□ 3.59
TUBB6-201ENST00000317702 ANKRD26Q9UPS8 1709 aa37.45■■■■□ 3.59
TUBB6-201ENST00000317702 ROBO2Q9HCK4 1378 aa37.44■■■■□ 3.58
TUBB6-201ENST00000317702 APAF1O14727 1248 aa37.43■■■■□ 3.58
TUBB6-201ENST00000317702 ANP32EQ9BTT0 268 aa37.43■■■■□ 3.58
TUBB6-201ENST00000317702 EID1Q9Y6B2 187 aa37.43■■■■□ 3.58
TUBB6-201ENST00000317702 PLIN1O60240 522 aa37.4■■■■□ 3.58
TUBB6-201ENST00000317702 CFAP53Q96M91 514 aa37.4■■■■□ 3.58
TUBB6-201ENST00000317702 PPIP5K1Q6PFW1 1433 aa37.37■■■■□ 3.57
TUBB6-201ENST00000317702 SLC26A8Q96RN1 970 aa37.37■■■■□ 3.57
TUBB6-201ENST00000317702 KIF20BQ96Q89 1820 aa37.37■■■■□ 3.57
TUBB6-201ENST00000317702 PTPRUQ92729 1446 aa37.37■■■■□ 3.57
TUBB6-201ENST00000317702 SLFN5Q08AF3 891 aa37.36■■■■□ 3.57
TUBB6-201ENST00000317702 THEMISQ8N1K5 641 aaPredicted RBP37.35■■■■□ 3.57
TUBB6-201ENST00000317702 NGEFQ8N5V2 710 aa37.35■■■■□ 3.57
TUBB6-201ENST00000317702 CPSF1Q10570 1443 aaKnown RBP37.34■■■■□ 3.57
TUBB6-201ENST00000317702 NUDT16Q96DE0 195 aaKnown RBP37.33■■■■□ 3.57
TUBB6-201ENST00000317702 RIMS1Q86UR5 1692 aaKnown RBP37.32■■■■□ 3.57
TUBB6-201ENST00000317702 MSH5O43196 834 aa37.32■■■■□ 3.57
TUBB6-201ENST00000317702 TRMT2AQ8IZ69 625 aaKnown RBP37.32■■■■□ 3.56
TUBB6-201ENST00000317702 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.31■■■■□ 3.56
TUBB6-201ENST00000317702 ADGRB2O60241 1585 aa37.3■■■■□ 3.56
TUBB6-201ENST00000317702 CRBNQ96SW2 442 aa37.3■■■■□ 3.56
TUBB6-201ENST00000317702 NCKAP5LQ9HCH0 1330 aa37.3■■■■□ 3.56
TUBB6-201ENST00000317702 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.29■■■■□ 3.56
TUBB6-201ENST00000317702 CDC42BPGQ6DT37 1551 aa37.28■■■■□ 3.56
TUBB6-201ENST00000317702 COL3A1P02461 1466 aaPredicted RBP37.28■■■■□ 3.56
TUBB6-201ENST00000317702 IQSEC2Q5JU85 1478 aa37.28■■■■□ 3.56
TUBB6-201ENST00000317702 RUNDC1Q96C34 613 aa37.27■■■■□ 3.56
TUBB6-201ENST00000317702 TBX22Q9Y458 520 aa37.27■■■■□ 3.56
TUBB6-201ENST00000317702 PRR36Q9H6K5 1346 aa37.27■■■■□ 3.56
TUBB6-201ENST00000317702 CEP170BQ9Y4F5 1589 aaPredicted RBP37.27■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms