RNA–Protein interactions for RNA: ENST00000316824.3

ALX1-201, Transcript of ALX homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALX1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALX1-201ENST00000316824 RNF39Q9H2S5 420 aa18.15■□□□□ 0.5
ALX1-201ENST00000316824 XRN1Q8IZH2 1706 aaKnown RBP18.15■□□□□ 0.5
ALX1-201ENST00000316824 NPHP4O75161 1426 aaPredicted RBP18.15■□□□□ 0.5
ALX1-201ENST00000316824 PTCH1Q13635 1447 aa18.15■□□□□ 0.5
ALX1-201ENST00000316824 SIRT1Q96EB6 747 aa18.15■□□□□ 0.5
ALX1-201ENST00000316824 STK26Q9P289 416 aa18.15■□□□□ 0.5
ALX1-201ENST00000316824 TULP4Q9NRJ4 1543 aa18.13■□□□□ 0.49
ALX1-201ENST00000316824 MYOM1P52179 1685 aa18.13■□□□□ 0.49
ALX1-201ENST00000316824 LMTK3Q96Q04 1460 aa18.13■□□□□ 0.49
ALX1-201ENST00000316824 POLR3GLQ9BT43 218 aa18.13■□□□□ 0.49
ALX1-201ENST00000316824 PUS7Q96PZ0 661 aaKnown RBP18.12■□□□□ 0.49
ALX1-201ENST00000316824 PRAM1Q96QH2 718 aa18.12■□□□□ 0.49
ALX1-201ENST00000316824 POGKQ9P215 609 aa18.12■□□□□ 0.49
ALX1-201ENST00000316824 EVC2Q86UK5 1308 aa18.11■□□□□ 0.49
ALX1-201ENST00000316824 ADGRB2O60241 1585 aa18.11■□□□□ 0.49
ALX1-201ENST00000316824 SLC26A8Q96RN1 970 aa18.1■□□□□ 0.49
ALX1-201ENST00000316824 FOXD4L1Q9NU39 408 aa18.1■□□□□ 0.49
ALX1-201ENST00000316824 PTPRUQ92729 1446 aa18.09■□□□□ 0.49
ALX1-201ENST00000316824 NINLQ9Y2I6 1382 aa18.08■□□□□ 0.48
ALX1-201ENST00000316824 CHD2O14647 1828 aaKnown RBP18.08■□□□□ 0.48
ALX1-201ENST00000316824 NWD1Q149M9 1564 aa18.07■□□□□ 0.48
ALX1-201ENST00000316824 ROBO2Q9HCK4 1378 aa18.07■□□□□ 0.48
ALX1-201ENST00000316824 ANP32CO43423 234 aa18.06■□□□□ 0.48
ALX1-201ENST00000316824 ATAD2Q6PL18 1390 aa18.06■□□□□ 0.48
ALX1-201ENST00000316824 PLEKHH1Q9ULM0 1364 aa18.05■□□□□ 0.48
ALX1-201ENST00000316824 SAFB2Q14151 953 aaKnown RBP eCLIP18.04■□□□□ 0.48
ALX1-201ENST00000316824 MIER1Q8N108 512 aa18.04■□□□□ 0.48
ALX1-201ENST00000316824 AMOTL2Q9Y2J4 779 aa18.04■□□□□ 0.48
ALX1-201ENST00000316824 MINK1Q8N4C8 1332 aaPredicted RBP18.03■□□□□ 0.48
ALX1-201ENST00000316824 NCKAP5LQ9HCH0 1330 aa18.03■□□□□ 0.48
ALX1-201ENST00000316824 CACNB1Q02641 598 aaPredicted RBP18.02■□□□□ 0.48
ALX1-201ENST00000316824 NKTRP30414 1462 aaKnown RBP18.01■□□□□ 0.47
ALX1-201ENST00000316824 WAPLQ7Z5K2 1190 aa18.01■□□□□ 0.47
ALX1-201ENST00000316824 U3KPZ7 1027 aaPredicted RBP18.01■□□□□ 0.47
ALX1-201ENST00000316824 KTN1Q86UP2 1357 aaKnown RBP18■□□□□ 0.47
ALX1-201ENST00000316824 SIPA1L2Q9P2F8 1722 aaPredicted RBP18■□□□□ 0.47
ALX1-201ENST00000316824 SRPK2P78362 688 aaKnown RBP17.99■□□□□ 0.47
ALX1-201ENST00000316824 STRCQ7RTU9 1775 aa17.98■□□□□ 0.47
ALX1-201ENST00000316824 C1QBPQ07021 282 aaKnown RBP17.98■□□□□ 0.47
ALX1-201ENST00000316824 PANK3Q9H999 370 aa17.98■□□□□ 0.47
ALX1-201ENST00000316824 USP32Q8NFA0 1604 aa17.97■□□□□ 0.47
ALX1-201ENST00000316824 WASLO00401 505 aaPredicted RBP17.97■□□□□ 0.47
ALX1-201ENST00000316824 KCNA6P17658 529 aa17.97■□□□□ 0.47
ALX1-201ENST00000316824 CDC42BPGQ6DT37 1551 aa17.96■□□□□ 0.47
ALX1-201ENST00000316824 ANKRD36BQ8N2N9 1353 aa17.96■□□□□ 0.47
ALX1-201ENST00000316824 HSPA2P54652 639 aa17.96■□□□□ 0.47
ALX1-201ENST00000316824 CDK19Q9BWU1 502 aa17.96■□□□□ 0.47
ALX1-201ENST00000316824 CABP2Q9NPB3 220 aa17.96■□□□□ 0.47
ALX1-201ENST00000316824 ATP7BP35670 1465 aa17.95■□□□□ 0.46
ALX1-201ENST00000316824 CCER2I3L3R5 266 aa17.95■□□□□ 0.46
ALX1-201ENST00000316824 NALCNQ8IZF0 1738 aa17.95■□□□□ 0.46
ALX1-201ENST00000316824 TOPAZ1Q8N9V7 1692 aa17.95■□□□□ 0.46
ALX1-201ENST00000316824 NPC1L1Q9UHC9 1359 aa17.95■□□□□ 0.46
ALX1-201ENST00000316824 ITSN1Q15811 1721 aa17.94■□□□□ 0.46
ALX1-201ENST00000316824 PER1O15534 1290 aaPredicted RBP17.94■□□□□ 0.46
ALX1-201ENST00000316824 PRKRIP1Q9H875 184 aaPredicted RBP17.94■□□□□ 0.46
ALX1-201ENST00000316824 ZBTB22O15209 634 aa17.93■□□□□ 0.46
ALX1-201ENST00000316824 KNSTRNQ9Y448 316 aa17.93■□□□□ 0.46
ALX1-201ENST00000316824 MYCNP04198 464 aaPredicted RBP17.92■□□□□ 0.46
ALX1-201ENST00000316824 TMC1Q8TDI8 760 aa17.92■□□□□ 0.46
ALX1-201ENST00000316824 ADGRL3Q9HAR2 1447 aa17.92■□□□□ 0.46
ALX1-201ENST00000316824 FMN2Q9NZ56 1722 aa17.92■□□□□ 0.46
ALX1-201ENST00000316824 ANKARQ7Z5J8 1434 aa17.91■□□□□ 0.46
ALX1-201ENST00000316824 RALBP1Q15311 655 aa17.9■□□□□ 0.46
ALX1-201ENST00000316824 PARD3Q8TEW0 1356 aa17.9■□□□□ 0.46
ALX1-201ENST00000316824 TERF2IPQ9NYB0 399 aa17.89■□□□□ 0.46
ALX1-201ENST00000316824 PPIP5K1Q6PFW1 1433 aa17.89■□□□□ 0.45
ALX1-201ENST00000316824 NSD3Q9BZ95 1437 aa17.89■□□□□ 0.45
ALX1-201ENST00000316824 A0A1W2PP64 1363 aa17.89■□□□□ 0.45
ALX1-201ENST00000316824 SLC12A5Q9H2X9 1139 aa17.89■□□□□ 0.45
ALX1-201ENST00000316824 NCOA3Q9Y6Q9 1424 aa17.88■□□□□ 0.45
ALX1-201ENST00000316824 CD163L1Q9NR16 1453 aa17.88■□□□□ 0.45
ALX1-201ENST00000316824 NSD2O96028 1365 aa17.88■□□□□ 0.45
ALX1-201ENST00000316824 HDGFL2Q7Z4V5 671 aaPredicted RBP17.87■□□□□ 0.45
ALX1-201ENST00000316824 CCDC61Q9Y6R9 512 aa17.87■□□□□ 0.45
ALX1-201ENST00000316824 STRCP1A6NGW2 1772 aa17.87■□□□□ 0.45
ALX1-201ENST00000316824 AKAP12Q02952 1782 aa17.87■□□□□ 0.45
ALX1-201ENST00000316824 MON2Q7Z3U7 1717 aa17.86■□□□□ 0.45
ALX1-201ENST00000316824 AMER1Q5JTC6 1135 aaPredicted RBP17.86■□□□□ 0.45
ALX1-201ENST00000316824 NUDT16Q96DE0 195 aaKnown RBP17.86■□□□□ 0.45
ALX1-201ENST00000316824 CGNL1Q0VF96 1302 aa17.85■□□□□ 0.45
ALX1-201ENST00000316824 MYBBP1AQ9BQG0 1328 aaKnown RBP17.85■□□□□ 0.45
ALX1-201ENST00000316824 CPSF1Q10570 1443 aaKnown RBP17.84■□□□□ 0.45
ALX1-201ENST00000316824 CARD14Q9BXL6 1004 aa17.84■□□□□ 0.45
ALX1-201ENST00000316824 DCCP43146 1447 aa17.84■□□□□ 0.45
ALX1-201ENST00000316824 CABP1Q9NZU7 370 aa17.83■□□□□ 0.45
ALX1-201ENST00000316824 PRR36Q9H6K5 1346 aa17.83■□□□□ 0.44
ALX1-201ENST00000316824 ANKRD26Q9UPS8 1709 aa17.83■□□□□ 0.44
ALX1-201ENST00000316824 KIF20BQ96Q89 1820 aa17.83■□□□□ 0.44
ALX1-201ENST00000316824 EDC4Q6P2E9 1401 aaKnown RBP17.82■□□□□ 0.44
ALX1-201ENST00000316824 CC2D1BQ5T0F9 858 aaKnown RBP17.81■□□□□ 0.44
ALX1-201ENST00000316824 NRKQ7Z2Y5 1582 aa17.81■□□□□ 0.44
ALX1-201ENST00000316824 PROSER2Q86WR7 435 aaPredicted RBP17.81■□□□□ 0.44
ALX1-201ENST00000316824 BRD4O60885 1362 aaPredicted RBP17.8■□□□□ 0.44
ALX1-201ENST00000316824 PLEKHG3A1L390 1219 aa17.8■□□□□ 0.44
ALX1-201ENST00000316824 C14orf37Q86TY3 774 aa17.8■□□□□ 0.44
ALX1-201ENST00000316824 SAMD1Q6SPF0 538 aaPredicted RBP17.79■□□□□ 0.44
ALX1-201ENST00000316824 NLRP13Q86W25 1043 aa17.79■□□□□ 0.44
ALX1-201ENST00000316824 ZNF692Q9BU19 519 aaPredicted RBP17.79■□□□□ 0.44
ALX1-201ENST00000316824 RGPD8O14715 1765 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms