RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 AMER1Q5JTC6 1135 aaPredicted RBP21.47■■□□□ 1.03
CALR-201ENST00000316448 PUS7Q96PZ0 661 aaKnown RBP21.47■■□□□ 1.03
CALR-201ENST00000316448 MRS2Q9HD23 443 aa21.47■■□□□ 1.03
CALR-201ENST00000316448 PARD3Q8TEW0 1356 aa21.47■■□□□ 1.03
CALR-201ENST00000316448 SETD1BQ9UPS6 1966 aaKnown RBP21.46■■□□□ 1.03
CALR-201ENST00000316448 RALBP1Q15311 655 aa21.46■■□□□ 1.03
CALR-201ENST00000316448 TMC1Q8TDI8 760 aa21.45■■□□□ 1.02
CALR-201ENST00000316448 TBX22Q9Y458 520 aa21.45■■□□□ 1.02
CALR-201ENST00000316448 TECPR2O15040 1411 aa21.45■■□□□ 1.02
CALR-201ENST00000316448 KTN1Q86UP2 1357 aaKnown RBP21.45■■□□□ 1.02
CALR-201ENST00000316448 SIRT1Q96EB6 747 aa21.45■■□□□ 1.02
CALR-201ENST00000316448 KNSTRNQ9Y448 316 aa21.45■■□□□ 1.02
CALR-201ENST00000316448 ZNF142P52746 1687 aaPredicted RBP21.44■■□□□ 1.02
CALR-201ENST00000316448 ROBO2Q9HCK4 1378 aa21.44■■□□□ 1.02
CALR-201ENST00000316448 CDK19Q9BWU1 502 aa21.43■■□□□ 1.02
CALR-201ENST00000316448 SRPK2P78362 688 aaKnown RBP21.42■■□□□ 1.02
CALR-201ENST00000316448 KNDC1Q76NI1 1749 aa21.42■■□□□ 1.02
CALR-201ENST00000316448 MYBBP1AQ9BQG0 1328 aaKnown RBP21.41■■□□□ 1.02
CALR-201ENST00000316448 FAM135BQ49AJ0 1406 aa21.41■■□□□ 1.02
CALR-201ENST00000316448 CPS1P31327 1500 aa21.4■■□□□ 1.02
CALR-201ENST00000316448 ANKLE2Q86XL3 938 aa21.39■■□□□ 1.02
CALR-201ENST00000316448 AMOTL2Q9Y2J4 779 aa21.39■■□□□ 1.02
CALR-201ENST00000316448 FAM9BQ8IZU0 186 aa21.38■■□□□ 1.01
CALR-201ENST00000316448 KDM4FA0A1W2PPD8 638 aa21.36■■□□□ 1.01
CALR-201ENST00000316448 NPC1L1Q9UHC9 1359 aa21.35■■□□□ 1.01
CALR-201ENST00000316448 WASLO00401 505 aaPredicted RBP21.35■■□□□ 1.01
CALR-201ENST00000316448 NSD3Q9BZ95 1437 aa21.35■■□□□ 1.01
CALR-201ENST00000316448 PNISRQ8TF01 805 aaKnown RBP21.34■■□□□ 1.01
CALR-201ENST00000316448 BRD4O60885 1362 aaPredicted RBP21.34■■□□□ 1.01
CALR-201ENST00000316448 ATAD2Q6PL18 1390 aa21.34■■□□□ 1.01
CALR-201ENST00000316448 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.33■■□□□ 1.01
CALR-201ENST00000316448 DIP2AQ14689 1571 aa21.33■■□□□ 1.01
CALR-201ENST00000316448 ANKRD36BQ8N2N9 1353 aa21.33■■□□□ 1.01
CALR-201ENST00000316448 NLRP13Q86W25 1043 aa21.33■■□□□ 1
CALR-201ENST00000316448 CD163L1Q9NR16 1453 aa21.33■■□□□ 1
CALR-201ENST00000316448 CABP1Q9NZU7 370 aa21.32■■□□□ 1
CALR-201ENST00000316448 NCKAP5LQ9HCH0 1330 aa21.32■■□□□ 1
CALR-201ENST00000316448 PPP2R1AP30153 589 aa21.31■■□□□ 1
CALR-201ENST00000316448 A0A1W2PP64 1363 aa21.31■■□□□ 1
CALR-201ENST00000316448 KCNA6P17658 529 aa21.3■■□□□ 1
CALR-201ENST00000316448 HNRNPUQ00839 825 aaKnown RBP eCLIP21.29■■□□□ 1
CALR-201ENST00000316448 XRN1Q8IZH2 1706 aaKnown RBP21.28■■□□□ 1
CALR-201ENST00000316448 PRR36Q9H6K5 1346 aa21.28■■□□□ 1
CALR-201ENST00000316448 NINLQ9Y2I6 1382 aa21.28■■□□□ 1
CALR-201ENST00000316448 NUDT16Q96DE0 195 aaKnown RBP21.27■■□□□ 1
CALR-201ENST00000316448 NPHP4O75161 1426 aaPredicted RBP21.27■■□□□ 1
CALR-201ENST00000316448 PTCH1Q13635 1447 aa21.27■■□□□ 1
CALR-201ENST00000316448 PIK3R4Q99570 1358 aa21.26■□□□□ 0.99
CALR-201ENST00000316448 TERF2IPQ9NYB0 399 aa21.23■□□□□ 0.99
CALR-201ENST00000316448 ADGRB2O60241 1585 aa21.23■□□□□ 0.99
CALR-201ENST00000316448 USP32Q8NFA0 1604 aa21.22■□□□□ 0.99
CALR-201ENST00000316448 CGNL1Q0VF96 1302 aa21.22■□□□□ 0.99
CALR-201ENST00000316448 CHD2O14647 1828 aaKnown RBP21.22■□□□□ 0.99
CALR-201ENST00000316448 PPIP5K1Q6PFW1 1433 aa21.22■□□□□ 0.99
CALR-201ENST00000316448 NUTM2FA1L443 756 aa21.21■□□□□ 0.99
CALR-201ENST00000316448 CCDC61Q9Y6R9 512 aa21.21■□□□□ 0.99
CALR-201ENST00000316448 ATP7BP35670 1465 aa21.21■□□□□ 0.99
CALR-201ENST00000316448 HSPA2P54652 639 aa21.21■□□□□ 0.99
CALR-201ENST00000316448 HDGFL2Q7Z4V5 671 aaPredicted RBP21.2■□□□□ 0.98
CALR-201ENST00000316448 MORC1Q86VD1 984 aa21.2■□□□□ 0.98
CALR-201ENST00000316448 RBM33Q96EV2 1170 aaKnown RBP21.2■□□□□ 0.98
CALR-201ENST00000316448 ZBED9Q6R2W3 1325 aa21.2■□□□□ 0.98
CALR-201ENST00000316448 CPSF1Q10570 1443 aaKnown RBP21.19■□□□□ 0.98
CALR-201ENST00000316448 FYB1O15117 783 aa21.19■□□□□ 0.98
CALR-201ENST00000316448 SENP3-EIF4A1A0A087X0R7 540 aa21.18■□□□□ 0.98
CALR-201ENST00000316448 TNNT2P45379 298 aaPredicted RBP21.18■□□□□ 0.98
CALR-201ENST00000316448 GGNBP2Q9H3C7 697 aa21.17■□□□□ 0.98
CALR-201ENST00000316448 NSD2O96028 1365 aa21.14■□□□□ 0.97
CALR-201ENST00000316448 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.14■□□□□ 0.97
CALR-201ENST00000316448 CDC42BPGQ6DT37 1551 aa21.13■□□□□ 0.97
CALR-201ENST00000316448 PLEKHG3A1L390 1219 aa21.13■□□□□ 0.97
CALR-201ENST00000316448 ADAMTS8Q9UP79 889 aa21.12■□□□□ 0.97
CALR-201ENST00000316448 SUPT16HQ9Y5B9 1047 aaKnown RBP21.12■□□□□ 0.97
CALR-201ENST00000316448 NKTRP30414 1462 aaKnown RBP21.11■□□□□ 0.97
CALR-201ENST00000316448 TOPAZ1Q8N9V7 1692 aa21.11■□□□□ 0.97
CALR-201ENST00000316448 ZRANB1Q9UGI0 708 aa21.11■□□□□ 0.97
CALR-201ENST00000316448 ACEP12821 1306 aa21.1■□□□□ 0.97
CALR-201ENST00000316448 LMTK3Q96Q04 1460 aa21.1■□□□□ 0.97
CALR-201ENST00000316448 MTHFSP49914 203 aa21.09■□□□□ 0.97
CALR-201ENST00000316448 EDC4Q6P2E9 1401 aaKnown RBP21.09■□□□□ 0.97
CALR-201ENST00000316448 INSRP06213 1382 aa21.08■□□□□ 0.97
CALR-201ENST00000316448 NME9Q86XW9 330 aa21.08■□□□□ 0.97
CALR-201ENST00000316448 PMFBP1Q8TBY8 1022 aa21.08■□□□□ 0.97
CALR-201ENST00000316448 RGPD8O14715 1765 aaPredicted RBP21.08■□□□□ 0.96
CALR-201ENST00000316448 AKAP12Q02952 1782 aa21.08■□□□□ 0.96
CALR-201ENST00000316448 NALCNQ8IZF0 1738 aa21.08■□□□□ 0.96
CALR-201ENST00000316448 FBLN1P23142 703 aa21.07■□□□□ 0.96
CALR-201ENST00000316448 ZNF692Q9BU19 519 aaPredicted RBP21.07■□□□□ 0.96
CALR-201ENST00000316448 NWD1Q149M9 1564 aa21.07■□□□□ 0.96
CALR-201ENST00000316448 POLR3AO14802 1390 aaPredicted RBP21.07■□□□□ 0.96
CALR-201ENST00000316448 MON2Q7Z3U7 1717 aa21.07■□□□□ 0.96
CALR-201ENST00000316448 FMN2Q9NZ56 1722 aa21.05■□□□□ 0.96
CALR-201ENST00000316448 ANKRD26Q9UPS8 1709 aa21.05■□□□□ 0.96
CALR-201ENST00000316448 KIF20BQ96Q89 1820 aa21.04■□□□□ 0.96
CALR-201ENST00000316448 BLMP54132 1417 aaPredicted RBP21.04■□□□□ 0.96
CALR-201ENST00000316448 TTC21BQ7Z4L5 1316 aa21.03■□□□□ 0.96
CALR-201ENST00000316448 ADGRL3Q9HAR2 1447 aa21.03■□□□□ 0.96
CALR-201ENST00000316448 ITSN1Q15811 1721 aa21.03■□□□□ 0.96
CALR-201ENST00000316448 PROSER2Q86WR7 435 aaPredicted RBP21.03■□□□□ 0.96
CALR-201ENST00000316448 ANKARQ7Z5J8 1434 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms