RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 ARHGEF28Q8N1W1 1705 aaKnown RBP19.44■□□□□ 0.7
CLK4-201ENST00000316308 MTHFSP49914 203 aa19.43■□□□□ 0.7
CLK4-201ENST00000316308 MINK1Q8N4C8 1332 aaPredicted RBP19.43■□□□□ 0.7
CLK4-201ENST00000316308 ARHGAP31Q2M1Z3 1444 aa19.43■□□□□ 0.7
CLK4-201ENST00000316308 TRMT2AQ8IZ69 625 aaKnown RBP19.42■□□□□ 0.7
CLK4-201ENST00000316308 RIMBP3CA6NJZ7 1639 aa19.42■□□□□ 0.7
CLK4-201ENST00000316308 RIMBP3BA6NNM3 1639 aa19.42■□□□□ 0.7
CLK4-201ENST00000316308 RIMBP3Q9UFD9 1639 aa19.42■□□□□ 0.7
CLK4-201ENST00000316308 SLC24A1O60721 1099 aa19.41■□□□□ 0.7
CLK4-201ENST00000316308 PAK3O75914 559 aaPredicted RBP19.41■□□□□ 0.7
CLK4-201ENST00000316308 SLC52A1Q9NWF4 448 aa19.4■□□□□ 0.7
CLK4-201ENST00000316308 PREX1Q8TCU6 1659 aa19.4■□□□□ 0.7
CLK4-201ENST00000316308 EVC2Q86UK5 1308 aa19.4■□□□□ 0.7
CLK4-201ENST00000316308 PRAM1Q96QH2 718 aa19.4■□□□□ 0.7
CLK4-201ENST00000316308 SRPK2P78362 688 aaKnown RBP19.39■□□□□ 0.7
CLK4-201ENST00000316308 POLR3AO14802 1390 aaPredicted RBP19.39■□□□□ 0.7
CLK4-201ENST00000316308 SHPRHQ149N8 1683 aa19.39■□□□□ 0.69
CLK4-201ENST00000316308 TMEM131LA2VDJ0 1609 aa19.39■□□□□ 0.69
CLK4-201ENST00000316308 WWC1Q8IX03 1113 aa19.38■□□□□ 0.69
CLK4-201ENST00000316308 GGNBP2Q9H3C7 697 aa19.38■□□□□ 0.69
CLK4-201ENST00000316308 DIP2BQ9P265 1576 aa19.37■□□□□ 0.69
CLK4-201ENST00000316308 A0A1W2PP64 1363 aa19.37■□□□□ 0.69
CLK4-201ENST00000316308 CGNL1Q0VF96 1302 aa19.36■□□□□ 0.69
CLK4-201ENST00000316308 FBLN1P23142 703 aa19.36■□□□□ 0.69
CLK4-201ENST00000316308 TCP11L2Q8N4U5 519 aa19.35■□□□□ 0.69
CLK4-201ENST00000316308 STAG3Q9UJ98 1225 aa19.35■□□□□ 0.69
CLK4-201ENST00000316308 NPM2Q86SE8 214 aaKnown RBP19.35■□□□□ 0.69
CLK4-201ENST00000316308 PTPRMP28827 1452 aa19.34■□□□□ 0.69
CLK4-201ENST00000316308 WAPLQ7Z5K2 1190 aa19.34■□□□□ 0.69
CLK4-201ENST00000316308 ANKRD36BQ8N2N9 1353 aa19.34■□□□□ 0.69
CLK4-201ENST00000316308 POGKQ9P215 609 aa19.33■□□□□ 0.68
CLK4-201ENST00000316308 NKTRP30414 1462 aaKnown RBP19.32■□□□□ 0.68
CLK4-201ENST00000316308 PDE4AP27815 886 aa19.32■□□□□ 0.68
CLK4-201ENST00000316308 YTHDC2Q9H6S0 1430 aaKnown RBP19.32■□□□□ 0.68
CLK4-201ENST00000316308 E9PSI1 815 aa19.31■□□□□ 0.68
CLK4-201ENST00000316308 TNNQ9UQP3 1299 aa19.31■□□□□ 0.68
CLK4-201ENST00000316308 ZFYVE9O95405 1425 aa19.31■□□□□ 0.68
CLK4-201ENST00000316308 KDM2BQ8NHM5 1336 aa19.3■□□□□ 0.68
CLK4-201ENST00000316308 MYT1Q01538 1121 aa19.3■□□□□ 0.68
CLK4-201ENST00000316308 ERICH6Q7L0X2 663 aa19.3■□□□□ 0.68
CLK4-201ENST00000316308 U2AF1L5P0DN76 240 aaPredicted RBP19.29■□□□□ 0.68
CLK4-201ENST00000316308 U2AF1Q01081 240 aaKnown RBP eCLIP19.29■□□□□ 0.68
CLK4-201ENST00000316308 RUNDC1Q96C34 613 aa19.29■□□□□ 0.68
CLK4-201ENST00000316308 BCL2L13Q9BXK5 485 aa19.29■□□□□ 0.68
CLK4-201ENST00000316308 FYB1O15117 783 aa19.29■□□□□ 0.68
CLK4-201ENST00000316308 CDK19Q9BWU1 502 aa19.29■□□□□ 0.68
CLK4-201ENST00000316308 CLTCQ00610 1675 aaKnown RBP19.28■□□□□ 0.68
CLK4-201ENST00000316308 CD163L1Q9NR16 1453 aa19.28■□□□□ 0.68
CLK4-201ENST00000316308 CABP1Q9NZU7 370 aa19.28■□□□□ 0.68
CLK4-201ENST00000316308 ALKQ9UM73 1620 aa19.28■□□□□ 0.68
CLK4-201ENST00000316308 TCERG1O14776 1098 aaKnown RBP19.28■□□□□ 0.68
CLK4-201ENST00000316308 PANK1Q8TE04 598 aa19.28■□□□□ 0.68
CLK4-201ENST00000316308 BACH2Q9BYV9 841 aa19.27■□□□□ 0.67
CLK4-201ENST00000316308 IQSEC2Q5JU85 1478 aa19.26■□□□□ 0.67
CLK4-201ENST00000316308 NOP58Q9Y2X3 529 aaKnown RBP19.25■□□□□ 0.67
CLK4-201ENST00000316308 USP32Q8NFA0 1604 aa19.25■□□□□ 0.67
CLK4-201ENST00000316308 NCKAP5LQ9HCH0 1330 aa19.25■□□□□ 0.67
CLK4-201ENST00000316308 ABCC11Q96J66 1382 aa19.25■□□□□ 0.67
CLK4-201ENST00000316308 U2SURPO15042 1029 aaKnown RBP19.25■□□□□ 0.67
CLK4-201ENST00000316308 FRAT1Q92837 279 aaPredicted RBP19.25■□□□□ 0.67
CLK4-201ENST00000316308 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.24■□□□□ 0.67
CLK4-201ENST00000316308 PHF23Q9BUL5 403 aaPredicted RBP19.24■□□□□ 0.67
CLK4-201ENST00000316308 COG6Q9Y2V7 657 aa19.24■□□□□ 0.67
CLK4-201ENST00000316308 A2ML1A8K2U0 1454 aa19.23■□□□□ 0.67
CLK4-201ENST00000316308 PUS7Q96PZ0 661 aaKnown RBP19.23■□□□□ 0.67
CLK4-201ENST00000316308 IPO9Q96P70 1041 aaKnown RBP19.23■□□□□ 0.67
CLK4-201ENST00000316308 IGHDP01880 384 aa19.22■□□□□ 0.67
CLK4-201ENST00000316308 ANP32AP39687 249 aaKnown RBP19.22■□□□□ 0.67
CLK4-201ENST00000316308 CFAP53Q96M91 514 aa19.22■□□□□ 0.67
CLK4-201ENST00000316308 NLRP1Q9C000 1473 aa19.21■□□□□ 0.67
CLK4-201ENST00000316308 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.21■□□□□ 0.67
CLK4-201ENST00000316308 TSR2Q969E8 191 aaKnown RBP19.21■□□□□ 0.67
CLK4-201ENST00000316308 RLBP1P12271 317 aa19.21■□□□□ 0.67
CLK4-201ENST00000316308 RGS3P49796 1198 aa19.21■□□□□ 0.67
CLK4-201ENST00000316308 ARHGEF40Q8TER5 1519 aa19.2■□□□□ 0.66
CLK4-201ENST00000316308 RIMS2Q9UQ26 1411 aa19.2■□□□□ 0.66
CLK4-201ENST00000316308 RARSP54136 660 aaKnown RBP19.19■□□□□ 0.66
CLK4-201ENST00000316308 ZRANB1Q9UGI0 708 aa19.19■□□□□ 0.66
CLK4-201ENST00000316308 METP08581 1390 aa19.19■□□□□ 0.66
CLK4-201ENST00000316308 NBR1Q14596 966 aa19.19■□□□□ 0.66
CLK4-201ENST00000316308 TXNDC2Q86VQ3 553 aa19.19■□□□□ 0.66
CLK4-201ENST00000316308 CLUAP1Q96AJ1 413 aa19.19■□□□□ 0.66
CLK4-201ENST00000316308 PPM1GO15355 546 aaPredicted RBP19.18■□□□□ 0.66
CLK4-201ENST00000316308 PLEKHF1Q96S99 279 aa19.18■□□□□ 0.66
CLK4-201ENST00000316308 TERF2IPQ9NYB0 399 aa19.18■□□□□ 0.66
CLK4-201ENST00000316308 CENPQQ7L2Z9 268 aaPredicted RBP19.17■□□□□ 0.66
CLK4-201ENST00000316308 NSD2O96028 1365 aa19.17■□□□□ 0.66
CLK4-201ENST00000316308 ATAD2Q6PL18 1390 aa19.17■□□□□ 0.66
CLK4-201ENST00000316308 CANXP27824 592 aaKnown RBP19.17■□□□□ 0.66
CLK4-201ENST00000316308 MS4A1P11836 297 aa19.16■□□□□ 0.66
CLK4-201ENST00000316308 COL3A1P02461 1466 aaPredicted RBP19.16■□□□□ 0.66
CLK4-201ENST00000316308 TRIM35Q9UPQ4 493 aa19.15■□□□□ 0.66
CLK4-201ENST00000316308 AGLP35573 1532 aa19.15■□□□□ 0.66
CLK4-201ENST00000316308 SPATA31D1Q6ZQQ2 1576 aa19.15■□□□□ 0.66
CLK4-201ENST00000316308 ZMYM3Q14202 1370 aa19.15■□□□□ 0.66
CLK4-201ENST00000316308 PLPPR3Q6T4P5 718 aa19.13■□□□□ 0.65
CLK4-201ENST00000316308 WDR63Q8IWG1 891 aa19.13■□□□□ 0.65
CLK4-201ENST00000316308 NGEFQ8N5V2 710 aa19.13■□□□□ 0.65
CLK4-201ENST00000316308 KIF13AQ9H1H9 1805 aa19.13■□□□□ 0.65
CLK4-201ENST00000316308 TMPOP42166 694 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms