RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 LRRFIP1Q32MZ4 808 aaKnown RBP25.33■■□□□ 1.65
KDM3B-201ENST00000314358 CHMP5Q9NZZ3 219 aa25.33■■□□□ 1.65
KDM3B-201ENST00000314358 ATP2B1P20020 1258 aa25.33■■□□□ 1.65
KDM3B-201ENST00000314358 CGNL1Q0VF96 1302 aa25.33■■□□□ 1.65
KDM3B-201ENST00000314358 CCDC73Q6ZRK6 1079 aa25.32■■□□□ 1.64
KDM3B-201ENST00000314358 FAM177BA6PVY3 158 aa25.32■■□□□ 1.64
KDM3B-201ENST00000314358 DZIP1LQ8IYY4 767 aaKnown RBP25.32■■□□□ 1.64
KDM3B-201ENST00000314358 STK11IPQ8N1F8 1099 aa25.32■■□□□ 1.64
KDM3B-201ENST00000314358 OSCARQ8IYS5 282 aa25.31■■□□□ 1.64
KDM3B-201ENST00000314358 RNF20Q5VTR2 975 aa25.31■■□□□ 1.64
KDM3B-201ENST00000314358 RUSC2Q8N2Y8 1516 aa25.31■■□□□ 1.64
KDM3B-201ENST00000314358 CHMP4CQ96CF2 233 aa25.31■■□□□ 1.64
KDM3B-201ENST00000314358 BRPF1P55201 1214 aaPredicted RBP25.31■■□□□ 1.64
KDM3B-201ENST00000314358 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.3■■□□□ 1.64
KDM3B-201ENST00000314358 NUTM2GQ5VZR2 741 aa25.3■■□□□ 1.64
KDM3B-201ENST00000314358 DDX19BQ9UMR2 479 aa25.3■■□□□ 1.64
KDM3B-201ENST00000314358 PHLDB1Q86UU1 1377 aa25.3■■□□□ 1.64
KDM3B-201ENST00000314358 OFD1O75665 1012 aa25.29■■□□□ 1.64
KDM3B-201ENST00000314358 FMNL2Q96PY5 1086 aa25.29■■□□□ 1.64
KDM3B-201ENST00000314358 MPNDQ8N594 471 aa25.29■■□□□ 1.64
KDM3B-201ENST00000314358 UACAQ9BZF9 1416 aa25.28■■□□□ 1.64
KDM3B-201ENST00000314358 HSP90B2PQ58FF3 399 aa25.28■■□□□ 1.64
KDM3B-201ENST00000314358 SAFBQ15424 915 aaKnown RBP eCLIP25.28■■□□□ 1.64
KDM3B-201ENST00000314358 PANK1Q8TE04 598 aa25.27■■□□□ 1.64
KDM3B-201ENST00000314358 IKQ13123 557 aaPredicted RBP25.27■■□□□ 1.64
KDM3B-201ENST00000314358 ARGLU1Q9NWB6 273 aaPredicted RBP25.27■■□□□ 1.64
KDM3B-201ENST00000314358 CEBPZQ03701 1054 aaKnown RBP25.27■■□□□ 1.64
KDM3B-201ENST00000314358 INTS3Q68E01 1043 aaKnown RBP25.27■■□□□ 1.64
KDM3B-201ENST00000314358 H0YHG0 523 aa25.27■■□□□ 1.64
KDM3B-201ENST00000314358 RBM10P98175 930 aaKnown RBP25.27■■□□□ 1.64
KDM3B-201ENST00000314358 GAPVD1Q14C86 1478 aa25.26■■□□□ 1.63
KDM3B-201ENST00000314358 OLFM4Q6UX06 510 aa25.26■■□□□ 1.63
KDM3B-201ENST00000314358 DIAPH1O60610 1272 aaKnown RBP25.26■■□□□ 1.63
KDM3B-201ENST00000314358 C22orf23Q9BZE7 217 aa25.26■■□□□ 1.63
KDM3B-201ENST00000314358 TSPYL4Q9UJ04 414 aa25.26■■□□□ 1.63
KDM3B-201ENST00000314358 FGD5Q6ZNL6 1462 aa25.25■■□□□ 1.63
KDM3B-201ENST00000314358 RBM33Q96EV2 1170 aaKnown RBP25.25■■□□□ 1.63
KDM3B-201ENST00000314358 SMC2O95347 1197 aa25.25■■□□□ 1.63
KDM3B-201ENST00000314358 PSME1Q06323 249 aa25.25■■□□□ 1.63
KDM3B-201ENST00000314358 RALYLQ86SE5 291 aaKnown RBP25.25■■□□□ 1.63
KDM3B-201ENST00000314358 RIC3Q7Z5B4 369 aa25.24■■□□□ 1.63
KDM3B-201ENST00000314358 SDF4Q9BRK5 362 aa25.23■■□□□ 1.63
KDM3B-201ENST00000314358 SPC24Q8NBT2 197 aa25.23■■□□□ 1.63
KDM3B-201ENST00000314358 CDR1P51861 262 aa25.23■■□□□ 1.63
KDM3B-201ENST00000314358 NASPP49321 788 aaPredicted RBP25.22■■□□□ 1.63
KDM3B-201ENST00000314358 TMEM132AQ24JP5 1023 aa25.22■■□□□ 1.63
KDM3B-201ENST00000314358 DDX58O95786 925 aaKnown RBP25.22■■□□□ 1.63
KDM3B-201ENST00000314358 NOM1Q5C9Z4 860 aaKnown RBP25.22■■□□□ 1.63
KDM3B-201ENST00000314358 EVC2Q86UK5 1308 aa25.22■■□□□ 1.63
KDM3B-201ENST00000314358 FAM69CQ0P6D2 419 aa25.22■■□□□ 1.63
KDM3B-201ENST00000314358 PRKRIP1Q9H875 184 aaPredicted RBP25.22■■□□□ 1.63
KDM3B-201ENST00000314358 CAVIN1Q6NZI2 390 aaKnown RBP25.21■■□□□ 1.63
KDM3B-201ENST00000314358 VGFO15240 615 aaPredicted RBP25.21■■□□□ 1.63
KDM3B-201ENST00000314358 NFKBIBQ15653 356 aa25.21■■□□□ 1.63
KDM3B-201ENST00000314358 ACBD3Q9H3P7 528 aa25.2■■□□□ 1.62
KDM3B-201ENST00000314358 RAD54L2Q9Y4B4 1467 aa25.2■■□□□ 1.62
KDM3B-201ENST00000314358 PAF1Q8N7H5 531 aa25.2■■□□□ 1.62
KDM3B-201ENST00000314358 DNAJC2Q99543 621 aaKnown RBP25.2■■□□□ 1.62
KDM3B-201ENST00000314358 TRIM5Q9C035 493 aa25.2■■□□□ 1.62
KDM3B-201ENST00000314358 NUCB2P80303 420 aa25.18■■□□□ 1.62
KDM3B-201ENST00000314358 API5Q9BZZ5 524 aaKnown RBP25.17■■□□□ 1.62
KDM3B-201ENST00000314358 ZBED9Q6R2W3 1325 aa25.16■■□□□ 1.62
KDM3B-201ENST00000314358 TSPYL1Q9H0U9 437 aa25.15■■□□□ 1.62
KDM3B-201ENST00000314358 C1orf115Q9H7X2 142 aa25.15■■□□□ 1.62
KDM3B-201ENST00000314358 PRDM2Q13029 1718 aa25.15■■□□□ 1.62
KDM3B-201ENST00000314358 CCDC173Q0VFZ6 552 aa25.15■■□□□ 1.62
KDM3B-201ENST00000314358 ERC2O15083 957 aa25.14■■□□□ 1.62
KDM3B-201ENST00000314358 AXDND1Q5T1B0 1012 aaPredicted RBP25.14■■□□□ 1.62
KDM3B-201ENST00000314358 CCDC191Q8NCU4 936 aa25.14■■□□□ 1.62
KDM3B-201ENST00000314358 CCDC39Q9UFE4 941 aa25.14■■□□□ 1.62
KDM3B-201ENST00000314358 FSD1Q9BTV5 496 aa25.14■■□□□ 1.61
KDM3B-201ENST00000314358 BRMS1Q9HCU9 246 aa25.14■■□□□ 1.61
KDM3B-201ENST00000314358 HSP90AB3PQ58FF7 597 aa25.14■■□□□ 1.61
KDM3B-201ENST00000314358 USP47Q96K76 1375 aa25.13■■□□□ 1.61
KDM3B-201ENST00000314358 IGF1RP08069 1367 aa25.13■■□□□ 1.61
KDM3B-201ENST00000314358 PRPF40AO75400 957 aaKnown RBP25.13■■□□□ 1.61
KDM3B-201ENST00000314358 NAT10Q9H0A0 1025 aaKnown RBP25.13■■□□□ 1.61
KDM3B-201ENST00000314358 ANKRD62A6NC57 917 aa25.12■■□□□ 1.61
KDM3B-201ENST00000314358 NEFHP12036 1026 aa25.12■■□□□ 1.61
KDM3B-201ENST00000314358 BRPF3Q9ULD4 1205 aa25.12■■□□□ 1.61
KDM3B-201ENST00000314358 STK3Q13188 491 aa25.11■■□□□ 1.61
KDM3B-201ENST00000314358 FAM177A1Q8N128 213 aaPredicted RBP25.11■■□□□ 1.61
KDM3B-201ENST00000314358 DHX57Q6P158 1386 aaKnown RBP25.11■■□□□ 1.61
KDM3B-201ENST00000314358 MAP4K4O95819 1239 aaPredicted RBP25.1■■□□□ 1.61
KDM3B-201ENST00000314358 RDXP35241 583 aaKnown RBP25.1■■□□□ 1.61
KDM3B-201ENST00000314358 FIBPO43427 364 aa25.09■■□□□ 1.61
KDM3B-201ENST00000314358 UBTFL1P0CB47 393 aaPredicted RBP25.09■■□□□ 1.61
KDM3B-201ENST00000314358 ATP2B2Q01814 1243 aa25.09■■□□□ 1.61
KDM3B-201ENST00000314358 MAPK8IP2Q13387 824 aaPredicted RBP25.09■■□□□ 1.61
KDM3B-201ENST00000314358 GGNBP2Q9H3C7 697 aa25.09■■□□□ 1.61
KDM3B-201ENST00000314358 ROCK1Q13464 1354 aa25.08■■□□□ 1.61
KDM3B-201ENST00000314358 TRAK2O60296 914 aa25.08■■□□□ 1.61
KDM3B-201ENST00000314358 DCTN1Q14203 1278 aa25.07■■□□□ 1.6
KDM3B-201ENST00000314358 CDK5RAP3Q96JB5 506 aa25.07■■□□□ 1.6
KDM3B-201ENST00000314358 CDC45O75419 566 aa25.07■■□□□ 1.6
KDM3B-201ENST00000314358 ATF3P18847 181 aa25.07■■□□□ 1.6
KDM3B-201ENST00000314358 RUNDC1Q96C34 613 aa25.07■■□□□ 1.6
KDM3B-201ENST00000314358 ZHX3Q9H4I2 956 aa25.06■■□□□ 1.6
KDM3B-201ENST00000314358 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.06■■□□□ 1.6
KDM3B-201ENST00000314358 FANCIQ9NVI1 1328 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms