RNA–Protein interactions for RNA: ENST00000312756.4

GFM1-202, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2

Gene GFM1, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-202ENST00000312756 ZFYVE9O95405 1425 aa10.53□□□□□ -0.72
GFM1-202ENST00000312756 CACNB1Q02641 598 aaPredicted RBP10.53□□□□□ -0.72
GFM1-202ENST00000312756 NLRP1Q9C000 1473 aa10.53□□□□□ -0.72
GFM1-202ENST00000312756 LTKP29376 864 aa10.52□□□□□ -0.73
GFM1-202ENST00000312756 CEP170BQ9Y4F5 1589 aaPredicted RBP10.52□□□□□ -0.73
GFM1-202ENST00000312756 ST20-MTHFSA0A0A6YYL1 179 aa10.51□□□□□ -0.73
GFM1-202ENST00000312756 VGFO15240 615 aaPredicted RBP10.51□□□□□ -0.73
GFM1-202ENST00000312756 HOXD11P31277 338 aaPredicted RBP10.51□□□□□ -0.73
GFM1-202ENST00000312756 LMTK3Q96Q04 1460 aa10.51□□□□□ -0.73
GFM1-202ENST00000312756 TMEM2Q9UHN6 1383 aa10.51□□□□□ -0.73
GFM1-202ENST00000312756 ZMYND15Q9H091 742 aa10.51□□□□□ -0.73
GFM1-202ENST00000312756 GPRASP1Q5JY77 1395 aa10.5□□□□□ -0.73
GFM1-202ENST00000312756 ASXL1Q8IXJ9 1541 aa10.5□□□□□ -0.73
GFM1-202ENST00000312756 IQGAP1P46940 1657 aa10.5□□□□□ -0.73
GFM1-202ENST00000312756 KIAA1210Q9ULL0 1709 aa10.5□□□□□ -0.73
GFM1-202ENST00000312756 NRXN3Q9Y4C0 1643 aa10.5□□□□□ -0.73
GFM1-202ENST00000312756 KDM5AP29375 1690 aaKnown RBP10.5□□□□□ -0.73
GFM1-202ENST00000312756 RBM10P98175 930 aaKnown RBP10.5□□□□□ -0.73
GFM1-202ENST00000312756 C14orf93Q9H972 538 aaKnown RBP10.5□□□□□ -0.73
GFM1-202ENST00000312756 ZNF142P52746 1687 aaPredicted RBP10.49□□□□□ -0.73
GFM1-202ENST00000312756 ADGRB1O14514 1584 aa10.49□□□□□ -0.73
GFM1-202ENST00000312756 HSPA2P54652 639 aa10.49□□□□□ -0.73
GFM1-202ENST00000312756 SAMD1Q6SPF0 538 aaPredicted RBP10.49□□□□□ -0.73
GFM1-202ENST00000312756 TXNDC2Q86VQ3 553 aa10.48□□□□□ -0.73
GFM1-202ENST00000312756 STAC3Q96MF2 364 aa10.48□□□□□ -0.73
GFM1-202ENST00000312756 TRAK1Q9UPV9 953 aa10.48□□□□□ -0.73
GFM1-202ENST00000312756 LAMC1P11047 1609 aa10.48□□□□□ -0.73
GFM1-202ENST00000312756 ALKQ9UM73 1620 aa10.48□□□□□ -0.73
GFM1-202ENST00000312756 DEKP35659 375 aaKnown RBP10.48□□□□□ -0.73
GFM1-202ENST00000312756 STK26Q9P289 416 aa10.48□□□□□ -0.73
GFM1-202ENST00000312756 SETD1AO15047 1707 aaKnown RBP10.48□□□□□ -0.73
GFM1-202ENST00000312756 WASHC2AQ641Q2 1341 aa10.48□□□□□ -0.73
GFM1-202ENST00000312756 POLR3GLQ9BT43 218 aa10.47□□□□□ -0.73
GFM1-202ENST00000312756 ARHGAP23Q9P227 1491 aa10.47□□□□□ -0.73
GFM1-202ENST00000312756 DDX10Q13206 875 aaKnown RBP10.46□□□□□ -0.73
GFM1-202ENST00000312756 DIEXFQ68CQ4 756 aaKnown RBP10.46□□□□□ -0.73
GFM1-202ENST00000312756 SCAF11Q99590 1463 aaKnown RBP10.46□□□□□ -0.73
GFM1-202ENST00000312756 SLIT1O75093 1534 aa10.46□□□□□ -0.73
GFM1-202ENST00000312756 THEMISQ8N1K5 641 aaPredicted RBP10.46□□□□□ -0.74
GFM1-202ENST00000312756 SLC26A8Q96RN1 970 aa10.46□□□□□ -0.74
GFM1-202ENST00000312756 SETBP1Q9Y6X0 1596 aa10.45□□□□□ -0.74
GFM1-202ENST00000312756 METP08581 1390 aa10.45□□□□□ -0.74
GFM1-202ENST00000312756 BRPF1P55201 1214 aaPredicted RBP10.45□□□□□ -0.74
GFM1-202ENST00000312756 SAFB2Q14151 953 aaKnown RBP eCLIP10.45□□□□□ -0.74
GFM1-202ENST00000312756 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.45□□□□□ -0.74
GFM1-202ENST00000312756 TESK2Q96S53 571 aa10.45□□□□□ -0.74
GFM1-202ENST00000312756 KIF7Q2M1P5 1343 aa10.45□□□□□ -0.74
GFM1-202ENST00000312756 SPOCK2Q92563 424 aa10.44□□□□□ -0.74
GFM1-202ENST00000312756 ADAMTS13Q76LX8 1427 aa10.44□□□□□ -0.74
GFM1-202ENST00000312756 ARHGEF28Q8N1W1 1705 aaKnown RBP10.44□□□□□ -0.74
GFM1-202ENST00000312756 DISP3Q9P2K9 1392 aa10.43□□□□□ -0.74
GFM1-202ENST00000312756 EID1Q9Y6B2 187 aa10.43□□□□□ -0.74
GFM1-202ENST00000312756 CCDC7Q96M83 1385 aa10.43□□□□□ -0.74
GFM1-202ENST00000312756 A0A0U1RQG5 324 aaPredicted RBP10.43□□□□□ -0.74
GFM1-202ENST00000312756 DHX37Q8IY37 1157 aaKnown RBP10.43□□□□□ -0.74
GFM1-202ENST00000312756 POLR1AO95602 1720 aaPredicted RBP10.42□□□□□ -0.74
GFM1-202ENST00000312756 YTHDC2Q9H6S0 1430 aaKnown RBP10.42□□□□□ -0.74
GFM1-202ENST00000312756 PLEKHG1Q9ULL1 1385 aa10.42□□□□□ -0.74
GFM1-202ENST00000312756 NCKAP5LQ9HCH0 1330 aa10.42□□□□□ -0.74
GFM1-202ENST00000312756 QRICH2Q9H0J4 1663 aa10.41□□□□□ -0.74
GFM1-202ENST00000312756 HDGFP51858 240 aaKnown RBP10.41□□□□□ -0.74
GFM1-202ENST00000312756 WAPLQ7Z5K2 1190 aa10.41□□□□□ -0.74
GFM1-202ENST00000312756 PLEKHH1Q9ULM0 1364 aa10.4□□□□□ -0.74
GFM1-202ENST00000312756 PTPRUQ92729 1446 aa10.4□□□□□ -0.74
GFM1-202ENST00000312756 STRCQ7RTU9 1775 aa10.4□□□□□ -0.74
GFM1-202ENST00000312756 ANKLE2Q86XL3 938 aa10.4□□□□□ -0.75
GFM1-202ENST00000312756 PRAM1Q96QH2 718 aa10.4□□□□□ -0.75
GFM1-202ENST00000312756 BCCIPQ9P287 314 aaKnown RBP eCLIP10.4□□□□□ -0.75
GFM1-202ENST00000312756 CENPJQ9HC77 1338 aaPredicted RBP10.39□□□□□ -0.75
GFM1-202ENST00000312756 MED14O60244 1454 aa10.39□□□□□ -0.75
GFM1-202ENST00000312756 HSP90B1P14625 803 aaKnown RBP10.38□□□□□ -0.75
GFM1-202ENST00000312756 EIF3AQ14152 1382 aaKnown RBP10.38□□□□□ -0.75
GFM1-202ENST00000312756 CNGB1Q14028 1251 aaPredicted RBP10.38□□□□□ -0.75
GFM1-202ENST00000312756 MINK1Q8N4C8 1332 aaPredicted RBP10.37□□□□□ -0.75
GFM1-202ENST00000312756 MIER1Q8N108 512 aa10.37□□□□□ -0.75
GFM1-202ENST00000312756 RBM33Q96EV2 1170 aaKnown RBP10.37□□□□□ -0.75
GFM1-202ENST00000312756 LRPPRCP42704 1394 aaKnown RBP10.37□□□□□ -0.75
GFM1-202ENST00000312756 TMF1P82094 1093 aa10.36□□□□□ -0.75
GFM1-202ENST00000312756 POGKQ9P215 609 aa10.36□□□□□ -0.75
GFM1-202ENST00000312756 ROBO2Q9HCK4 1378 aa10.36□□□□□ -0.75
GFM1-202ENST00000312756 TULP4Q9NRJ4 1543 aa10.35□□□□□ -0.75
GFM1-202ENST00000312756 NPHP4O75161 1426 aaPredicted RBP10.35□□□□□ -0.75
GFM1-202ENST00000312756 CDK11BP21127 795 aaKnown RBP10.35□□□□□ -0.75
GFM1-202ENST00000312756 AMOTL2Q9Y2J4 779 aa10.35□□□□□ -0.75
GFM1-202ENST00000312756 TBX22Q9Y458 520 aa10.35□□□□□ -0.75
GFM1-202ENST00000312756 ABCC11Q96J66 1382 aa10.35□□□□□ -0.75
GFM1-202ENST00000312756 KNDC1Q76NI1 1749 aa10.35□□□□□ -0.75
GFM1-202ENST00000312756 NAP1L5Q96NT1 182 aaPredicted RBP10.34□□□□□ -0.75
GFM1-202ENST00000312756 KCNA6P17658 529 aa10.34□□□□□ -0.75
GFM1-202ENST00000312756 CABP2Q9NPB3 220 aa10.34□□□□□ -0.75
GFM1-202ENST00000312756 MYOM1P52179 1685 aa10.34□□□□□ -0.75
GFM1-202ENST00000312756 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.33□□□□□ -0.76
GFM1-202ENST00000312756 CPS1P31327 1500 aa10.33□□□□□ -0.76
GFM1-202ENST00000312756 DLC1Q96QB1 1528 aa10.33□□□□□ -0.76
GFM1-202ENST00000312756 DIP2AQ14689 1571 aa10.33□□□□□ -0.76
GFM1-202ENST00000312756 CHD2O14647 1828 aaKnown RBP10.32□□□□□ -0.76
GFM1-202ENST00000312756 XRN1Q8IZH2 1706 aaKnown RBP10.32□□□□□ -0.76
GFM1-202ENST00000312756 SUPT16HQ9Y5B9 1047 aaKnown RBP10.32□□□□□ -0.76
GFM1-202ENST00000312756 TECPR2O15040 1411 aa10.32□□□□□ -0.76
GFM1-202ENST00000312756 SBNO2Q9Y2G9 1366 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms