RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 MINK1Q8N4C8 1332 aaPredicted RBP22.62■■□□□ 1.21
CLCF1-201ENST00000312438 CABP2Q9NPB3 220 aa22.62■■□□□ 1.21
CLCF1-201ENST00000312438 SRPK2P78362 688 aaKnown RBP22.61■■□□□ 1.21
CLCF1-201ENST00000312438 TULP4Q9NRJ4 1543 aa22.61■■□□□ 1.21
CLCF1-201ENST00000312438 NRXN3Q9Y4C0 1643 aa22.61■■□□□ 1.21
CLCF1-201ENST00000312438 ARHGAP23Q9P227 1491 aa22.6■■□□□ 1.21
CLCF1-201ENST00000312438 WAPLQ7Z5K2 1190 aa22.6■■□□□ 1.21
CLCF1-201ENST00000312438 SLIT1O75093 1534 aa22.6■■□□□ 1.21
CLCF1-201ENST00000312438 ADAMTS13Q76LX8 1427 aa22.58■■□□□ 1.21
CLCF1-201ENST00000312438 NINLQ9Y2I6 1382 aa22.58■■□□□ 1.21
CLCF1-201ENST00000312438 ATAD2Q6PL18 1390 aa22.58■■□□□ 1.2
CLCF1-201ENST00000312438 SETD1AO15047 1707 aaKnown RBP22.58■■□□□ 1.2
CLCF1-201ENST00000312438 CDK19Q9BWU1 502 aa22.57■■□□□ 1.2
CLCF1-201ENST00000312438 TECPR2O15040 1411 aa22.55■■□□□ 1.2
CLCF1-201ENST00000312438 FAM135BQ49AJ0 1406 aa22.55■■□□□ 1.2
CLCF1-201ENST00000312438 PPP2R1AP30153 589 aa22.55■■□□□ 1.2
CLCF1-201ENST00000312438 TBX22Q9Y458 520 aa22.55■■□□□ 1.2
CLCF1-201ENST00000312438 ANKRD36BQ8N2N9 1353 aa22.54■■□□□ 1.2
CLCF1-201ENST00000312438 ADAMTSL3P82987 1691 aa22.54■■□□□ 1.2
CLCF1-201ENST00000312438 PLEKHH1Q9ULM0 1364 aa22.54■■□□□ 1.2
CLCF1-201ENST00000312438 RIMS1Q86UR5 1692 aaKnown RBP22.53■■□□□ 1.2
CLCF1-201ENST00000312438 MED14O60244 1454 aa22.53■■□□□ 1.2
CLCF1-201ENST00000312438 NSD3Q9BZ95 1437 aa22.52■■□□□ 1.2
CLCF1-201ENST00000312438 SLC26A8Q96RN1 970 aa22.52■■□□□ 1.2
CLCF1-201ENST00000312438 ZBED9Q6R2W3 1325 aa22.51■■□□□ 1.19
CLCF1-201ENST00000312438 TERF2IPQ9NYB0 399 aa22.5■■□□□ 1.19
CLCF1-201ENST00000312438 CGNL1Q0VF96 1302 aa22.49■■□□□ 1.19
CLCF1-201ENST00000312438 WASLO00401 505 aaPredicted RBP22.49■■□□□ 1.19
CLCF1-201ENST00000312438 CEP170BQ9Y4F5 1589 aaPredicted RBP22.48■■□□□ 1.19
CLCF1-201ENST00000312438 ANKLE2Q86XL3 938 aa22.47■■□□□ 1.19
CLCF1-201ENST00000312438 MORC1Q86VD1 984 aa22.46■■□□□ 1.19
CLCF1-201ENST00000312438 CABP1Q9NZU7 370 aa22.45■■□□□ 1.19
CLCF1-201ENST00000312438 ROBO2Q9HCK4 1378 aa22.45■■□□□ 1.18
CLCF1-201ENST00000312438 CPS1P31327 1500 aa22.45■■□□□ 1.18
CLCF1-201ENST00000312438 INSRP06213 1382 aa22.45■■□□□ 1.18
CLCF1-201ENST00000312438 HDGFL2Q7Z4V5 671 aaPredicted RBP22.45■■□□□ 1.18
CLCF1-201ENST00000312438 AMOTL2Q9Y2J4 779 aa22.45■■□□□ 1.18
CLCF1-201ENST00000312438 KNDC1Q76NI1 1749 aa22.44■■□□□ 1.18
CLCF1-201ENST00000312438 A0A1W2PP64 1363 aa22.43■■□□□ 1.18
CLCF1-201ENST00000312438 NSD2O96028 1365 aa22.43■■□□□ 1.18
CLCF1-201ENST00000312438 PTPRUQ92729 1446 aa22.42■■□□□ 1.18
CLCF1-201ENST00000312438 DIP2AQ14689 1571 aa22.4■■□□□ 1.18
CLCF1-201ENST00000312438 USP32Q8NFA0 1604 aa22.39■■□□□ 1.18
CLCF1-201ENST00000312438 NUDT16Q96DE0 195 aaKnown RBP22.39■■□□□ 1.17
CLCF1-201ENST00000312438 PIK3R4Q99570 1358 aa22.39■■□□□ 1.17
CLCF1-201ENST00000312438 CD163L1Q9NR16 1453 aa22.39■■□□□ 1.17
CLCF1-201ENST00000312438 CCDC61Q9Y6R9 512 aa22.38■■□□□ 1.17
CLCF1-201ENST00000312438 WDR43Q15061 677 aaKnown RBP eCLIP22.38■■□□□ 1.17
CLCF1-201ENST00000312438 ADAMTS8Q9UP79 889 aa22.36■■□□□ 1.17
CLCF1-201ENST00000312438 SETD1BQ9UPS6 1966 aaKnown RBP22.36■■□□□ 1.17
CLCF1-201ENST00000312438 PTCH1Q13635 1447 aa22.35■■□□□ 1.17
CLCF1-201ENST00000312438 ZNF142P52746 1687 aaPredicted RBP22.35■■□□□ 1.17
CLCF1-201ENST00000312438 ATP7BP35670 1465 aa22.34■■□□□ 1.17
CLCF1-201ENST00000312438 FYB1O15117 783 aa22.34■■□□□ 1.17
CLCF1-201ENST00000312438 POLR3AO14802 1390 aaPredicted RBP22.34■■□□□ 1.17
CLCF1-201ENST00000312438 TNNT2P45379 298 aaPredicted RBP22.33■■□□□ 1.16
CLCF1-201ENST00000312438 PPIP5K1Q6PFW1 1433 aa22.33■■□□□ 1.16
CLCF1-201ENST00000312438 BLMP54132 1417 aaPredicted RBP22.32■■□□□ 1.16
CLCF1-201ENST00000312438 GGNBP2Q9H3C7 697 aa22.31■■□□□ 1.16
CLCF1-201ENST00000312438 ZNF692Q9BU19 519 aaPredicted RBP22.31■■□□□ 1.16
CLCF1-201ENST00000312438 CPSF1Q10570 1443 aaKnown RBP22.3■■□□□ 1.16
CLCF1-201ENST00000312438 KCNA6P17658 529 aa22.3■■□□□ 1.16
CLCF1-201ENST00000312438 MTHFSP49914 203 aa22.29■■□□□ 1.16
CLCF1-201ENST00000312438 ADGRB2O60241 1585 aa22.29■■□□□ 1.16
CLCF1-201ENST00000312438 PRR36Q9H6K5 1346 aa22.29■■□□□ 1.16
CLCF1-201ENST00000312438 CFAP53Q96M91 514 aa22.28■■□□□ 1.16
CLCF1-201ENST00000312438 NCKAP5LQ9HCH0 1330 aa22.27■■□□□ 1.16
CLCF1-201ENST00000312438 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.27■■□□□ 1.16
CLCF1-201ENST00000312438 PLEKHG3A1L390 1219 aa22.27■■□□□ 1.15
CLCF1-201ENST00000312438 SENP3-EIF4A1A0A087X0R7 540 aa22.26■■□□□ 1.15
CLCF1-201ENST00000312438 PDE3BQ13370 1112 aa22.26■■□□□ 1.15
CLCF1-201ENST00000312438 EDC4Q6P2E9 1401 aaKnown RBP22.25■■□□□ 1.15
CLCF1-201ENST00000312438 SMG6Q86US8 1419 aaKnown RBP22.25■■□□□ 1.15
CLCF1-201ENST00000312438 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.25■■□□□ 1.15
CLCF1-201ENST00000312438 NEFLP07196 543 aa22.24■■□□□ 1.15
CLCF1-201ENST00000312438 NUDCQ9Y266 331 aa22.24■■□□□ 1.15
CLCF1-201ENST00000312438 SUPT16HQ9Y5B9 1047 aaKnown RBP22.24■■□□□ 1.15
CLCF1-201ENST00000312438 NPHP4O75161 1426 aaPredicted RBP22.24■■□□□ 1.15
CLCF1-201ENST00000312438 XRN1Q8IZH2 1706 aaKnown RBP22.22■■□□□ 1.15
CLCF1-201ENST00000312438 SALL2Q9Y467 1007 aaPredicted RBP22.22■■□□□ 1.15
CLCF1-201ENST00000312438 NUTM2FA1L443 756 aa22.21■■□□□ 1.15
CLCF1-201ENST00000312438 CDC42BPGQ6DT37 1551 aa22.21■■□□□ 1.15
CLCF1-201ENST00000312438 ACEP12821 1306 aa22.19■■□□□ 1.14
CLCF1-201ENST00000312438 FKBP8Q14318 412 aa22.19■■□□□ 1.14
CLCF1-201ENST00000312438 NGEFQ8N5V2 710 aa22.17■■□□□ 1.14
CLCF1-201ENST00000312438 NME9Q86XW9 330 aa22.16■■□□□ 1.14
CLCF1-201ENST00000312438 CCDC146Q8IYE0 955 aa22.15■■□□□ 1.14
CLCF1-201ENST00000312438 COG3Q96JB2 828 aa22.15■■□□□ 1.14
CLCF1-201ENST00000312438 TTC21BQ7Z4L5 1316 aa22.14■■□□□ 1.13
CLCF1-201ENST00000312438 ANKARQ7Z5J8 1434 aa22.13■■□□□ 1.13
CLCF1-201ENST00000312438 APAF1O14727 1248 aa22.13■■□□□ 1.13
CLCF1-201ENST00000312438 CHD2O14647 1828 aaKnown RBP22.12■■□□□ 1.13
CLCF1-201ENST00000312438 POLKQ9UBT6 870 aa22.12■■□□□ 1.13
CLCF1-201ENST00000312438 NGDNQ8NEJ9 315 aaKnown RBP22.11■■□□□ 1.13
CLCF1-201ENST00000312438 PMFBP1Q8TBY8 1022 aa22.11■■□□□ 1.13
CLCF1-201ENST00000312438 RUNDC1Q96C34 613 aa22.11■■□□□ 1.13
CLCF1-201ENST00000312438 ANKRD26Q9UPS8 1709 aa22.11■■□□□ 1.13
CLCF1-201ENST00000312438 PNPLA6Q8IY17 1366 aa22.11■■□□□ 1.13
CLCF1-201ENST00000312438 USP6P35125 1406 aa22.11■■□□□ 1.13
CLCF1-201ENST00000312438 CDCA7LQ96GN5 454 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms