RNA–Protein interactions for RNA: ENST00000312295.4

RTP1-201, Transcript of receptor transporter protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP1, Length 2,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1-201ENST00000312295 SLC26A8Q96RN1 970 aa20.58■□□□□ 0.88
RTP1-201ENST00000312295 CARD14Q9BXL6 1004 aa20.57■□□□□ 0.88
RTP1-201ENST00000312295 ADAMTS13Q76LX8 1427 aa20.57■□□□□ 0.88
RTP1-201ENST00000312295 AMER1Q5JTC6 1135 aaPredicted RBP20.57■□□□□ 0.88
RTP1-201ENST00000312295 GTF3C3Q9Y5Q9 886 aa20.57■□□□□ 0.88
RTP1-201ENST00000312295 SLIT1O75093 1534 aa20.55■□□□□ 0.88
RTP1-201ENST00000312295 EID1Q9Y6B2 187 aa20.55■□□□□ 0.88
RTP1-201ENST00000312295 PLEKHG1Q9ULL1 1385 aa20.55■□□□□ 0.88
RTP1-201ENST00000312295 NSD3Q9BZ95 1437 aa20.54■□□□□ 0.88
RTP1-201ENST00000312295 ARHGAP23Q9P227 1491 aa20.54■□□□□ 0.88
RTP1-201ENST00000312295 DLC1Q96QB1 1528 aa20.53■□□□□ 0.88
RTP1-201ENST00000312295 THEMISQ8N1K5 641 aaPredicted RBP20.52■□□□□ 0.88
RTP1-201ENST00000312295 NLRP13Q86W25 1043 aa20.51■□□□□ 0.87
RTP1-201ENST00000312295 BRD4O60885 1362 aaPredicted RBP20.51■□□□□ 0.87
RTP1-201ENST00000312295 ABCC11Q96J66 1382 aa20.51■□□□□ 0.87
RTP1-201ENST00000312295 KNDC1Q76NI1 1749 aa20.5■□□□□ 0.87
RTP1-201ENST00000312295 CDK19Q9BWU1 502 aa20.49■□□□□ 0.87
RTP1-201ENST00000312295 ROBO2Q9HCK4 1378 aa20.49■□□□□ 0.87
RTP1-201ENST00000312295 CPS1P31327 1500 aa20.48■□□□□ 0.87
RTP1-201ENST00000312295 PNISRQ8TF01 805 aaKnown RBP20.48■□□□□ 0.87
RTP1-201ENST00000312295 PTPRUQ92729 1446 aa20.47■□□□□ 0.87
RTP1-201ENST00000312295 ZNF142P52746 1687 aaPredicted RBP20.46■□□□□ 0.87
RTP1-201ENST00000312295 A0A1W2PP64 1363 aa20.46■□□□□ 0.87
RTP1-201ENST00000312295 PPP2R1AP30153 589 aa20.45■□□□□ 0.86
RTP1-201ENST00000312295 MED14O60244 1454 aa20.45■□□□□ 0.86
RTP1-201ENST00000312295 TECPR2O15040 1411 aa20.45■□□□□ 0.86
RTP1-201ENST00000312295 ANKRD36BQ8N2N9 1353 aa20.45■□□□□ 0.86
RTP1-201ENST00000312295 TNNT2P45379 298 aaPredicted RBP20.45■□□□□ 0.86
RTP1-201ENST00000312295 ATAD2Q6PL18 1390 aa20.44■□□□□ 0.86
RTP1-201ENST00000312295 NCKAP5LQ9HCH0 1330 aa20.42■□□□□ 0.86
RTP1-201ENST00000312295 CABP1Q9NZU7 370 aa20.41■□□□□ 0.86
RTP1-201ENST00000312295 FAM135BQ49AJ0 1406 aa20.41■□□□□ 0.86
RTP1-201ENST00000312295 CD163L1Q9NR16 1453 aa20.41■□□□□ 0.86
RTP1-201ENST00000312295 NPC1L1Q9UHC9 1359 aa20.4■□□□□ 0.86
RTP1-201ENST00000312295 NUTM2FA1L443 756 aa20.4■□□□□ 0.86
RTP1-201ENST00000312295 PUS7Q96PZ0 661 aaKnown RBP20.4■□□□□ 0.86
RTP1-201ENST00000312295 AMOTL2Q9Y2J4 779 aa20.4■□□□□ 0.86
RTP1-201ENST00000312295 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.4■□□□□ 0.86
RTP1-201ENST00000312295 WASLO00401 505 aaPredicted RBP20.39■□□□□ 0.85
RTP1-201ENST00000312295 CGNL1Q0VF96 1302 aa20.38■□□□□ 0.85
RTP1-201ENST00000312295 USP32Q8NFA0 1604 aa20.38■□□□□ 0.85
RTP1-201ENST00000312295 DIP2AQ14689 1571 aa20.37■□□□□ 0.85
RTP1-201ENST00000312295 NINLQ9Y2I6 1382 aa20.37■□□□□ 0.85
RTP1-201ENST00000312295 MORC1Q86VD1 984 aa20.37■□□□□ 0.85
RTP1-201ENST00000312295 ANKLE2Q86XL3 938 aa20.36■□□□□ 0.85
RTP1-201ENST00000312295 TBX22Q9Y458 520 aa20.36■□□□□ 0.85
RTP1-201ENST00000312295 SALL2Q9Y467 1007 aaPredicted RBP20.36■□□□□ 0.85
RTP1-201ENST00000312295 ZBED9Q6R2W3 1325 aa20.36■□□□□ 0.85
RTP1-201ENST00000312295 PPIP5K1Q6PFW1 1433 aa20.35■□□□□ 0.85
RTP1-201ENST00000312295 TERF2IPQ9NYB0 399 aa20.34■□□□□ 0.85
RTP1-201ENST00000312295 GGNBP2Q9H3C7 697 aa20.34■□□□□ 0.85
RTP1-201ENST00000312295 SETD1BQ9UPS6 1966 aaKnown RBP20.34■□□□□ 0.85
RTP1-201ENST00000312295 XRN1Q8IZH2 1706 aaKnown RBP20.33■□□□□ 0.85
RTP1-201ENST00000312295 KCNA6P17658 529 aa20.33■□□□□ 0.85
RTP1-201ENST00000312295 HDGFL2Q7Z4V5 671 aaPredicted RBP20.33■□□□□ 0.84
RTP1-201ENST00000312295 NUDT16Q96DE0 195 aaKnown RBP20.33■□□□□ 0.84
RTP1-201ENST00000312295 PRR36Q9H6K5 1346 aa20.33■□□□□ 0.84
RTP1-201ENST00000312295 ATP7BP35670 1465 aa20.32■□□□□ 0.84
RTP1-201ENST00000312295 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.32■□□□□ 0.84
RTP1-201ENST00000312295 RBM33Q96EV2 1170 aaKnown RBP20.32■□□□□ 0.84
RTP1-201ENST00000312295 SIRT1Q96EB6 747 aa20.31■□□□□ 0.84
RTP1-201ENST00000312295 PTCH1Q13635 1447 aa20.31■□□□□ 0.84
RTP1-201ENST00000312295 ADGRB2O60241 1585 aa20.31■□□□□ 0.84
RTP1-201ENST00000312295 WDR43Q15061 677 aaKnown RBP eCLIP20.29■□□□□ 0.84
RTP1-201ENST00000312295 ADAMTS8Q9UP79 889 aa20.29■□□□□ 0.84
RTP1-201ENST00000312295 KIF20BQ96Q89 1820 aa20.27■□□□□ 0.84
RTP1-201ENST00000312295 NPHP4O75161 1426 aaPredicted RBP20.27■□□□□ 0.84
RTP1-201ENST00000312295 FYB1O15117 783 aa20.26■□□□□ 0.83
RTP1-201ENST00000312295 CDC42BPGQ6DT37 1551 aa20.26■□□□□ 0.83
RTP1-201ENST00000312295 BLMP54132 1417 aaPredicted RBP20.26■□□□□ 0.83
RTP1-201ENST00000312295 CCDC61Q9Y6R9 512 aa20.26■□□□□ 0.83
RTP1-201ENST00000312295 NSD2O96028 1365 aa20.26■□□□□ 0.83
RTP1-201ENST00000312295 NKTRP30414 1462 aaKnown RBP20.25■□□□□ 0.83
RTP1-201ENST00000312295 ITSN1Q15811 1721 aa20.25■□□□□ 0.83
RTP1-201ENST00000312295 CCDC146Q8IYE0 955 aa20.24■□□□□ 0.83
RTP1-201ENST00000312295 TOPAZ1Q8N9V7 1692 aa20.24■□□□□ 0.83
RTP1-201ENST00000312295 ANKRD26Q9UPS8 1709 aa20.24■□□□□ 0.83
RTP1-201ENST00000312295 MTHFSP49914 203 aa20.23■□□□□ 0.83
RTP1-201ENST00000312295 CPSF1Q10570 1443 aaKnown RBP20.23■□□□□ 0.83
RTP1-201ENST00000312295 CHD2O14647 1828 aaKnown RBP20.23■□□□□ 0.83
RTP1-201ENST00000312295 MYT1Q01538 1121 aa20.23■□□□□ 0.83
RTP1-201ENST00000312295 FBLN1P23142 703 aa20.22■□□□□ 0.83
RTP1-201ENST00000312295 HSPA2P54652 639 aa20.22■□□□□ 0.83
RTP1-201ENST00000312295 NME9Q86XW9 330 aa20.22■□□□□ 0.83
RTP1-201ENST00000312295 ZRANB1Q9UGI0 708 aa20.22■□□□□ 0.83
RTP1-201ENST00000312295 RGPD8O14715 1765 aaPredicted RBP20.21■□□□□ 0.83
RTP1-201ENST00000312295 SHPRHQ149N8 1683 aa20.21■□□□□ 0.83
RTP1-201ENST00000312295 MON2Q7Z3U7 1717 aa20.21■□□□□ 0.83
RTP1-201ENST00000312295 NALCNQ8IZF0 1738 aa20.21■□□□□ 0.83
RTP1-201ENST00000312295 PIK3R4Q99570 1358 aa20.21■□□□□ 0.83
RTP1-201ENST00000312295 AKAP12Q02952 1782 aa20.21■□□□□ 0.83
RTP1-201ENST00000312295 PMFBP1Q8TBY8 1022 aa20.21■□□□□ 0.83
RTP1-201ENST00000312295 EDC4Q6P2E9 1401 aaKnown RBP20.2■□□□□ 0.82
RTP1-201ENST00000312295 SUPT16HQ9Y5B9 1047 aaKnown RBP20.19■□□□□ 0.82
RTP1-201ENST00000312295 KDM4FA0A1W2PPD8 638 aa20.19■□□□□ 0.82
RTP1-201ENST00000312295 POLR3AO14802 1390 aaPredicted RBP20.19■□□□□ 0.82
RTP1-201ENST00000312295 ACEP12821 1306 aa20.18■□□□□ 0.82
RTP1-201ENST00000312295 IRX6P78412 446 aaPredicted RBP20.16■□□□□ 0.82
RTP1-201ENST00000312295 FKBP8Q14318 412 aa20.16■□□□□ 0.82
RTP1-201ENST00000312295 NRKQ7Z2Y5 1582 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms