RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 RAPGEF3O95398 923 aa12.55□□□□□ -0.4
RBFOX1-201ENST00000311745 B4GALNT3Q6L9W6 998 aa12.55□□□□□ -0.4
RBFOX1-201ENST00000311745 REREQ9P2R6 1566 aa12.55□□□□□ -0.4
RBFOX1-201ENST00000311745 CNGB1Q14028 1251 aaPredicted RBP12.54□□□□□ -0.4
RBFOX1-201ENST00000311745 AMER1Q5JTC6 1135 aaPredicted RBP12.54□□□□□ -0.4
RBFOX1-201ENST00000311745 CHMP4AQ9BY43 222 aa12.54□□□□□ -0.4
RBFOX1-201ENST00000311745 SETD1AO15047 1707 aaKnown RBP12.54□□□□□ -0.4
RBFOX1-201ENST00000311745 TSPOAP1O95153 1857 aa12.54□□□□□ -0.4
RBFOX1-201ENST00000311745 USP32Q8NFA0 1604 aa12.54□□□□□ -0.4
RBFOX1-201ENST00000311745 CFAP70Q5T0N1 1121 aa12.54□□□□□ -0.4
RBFOX1-201ENST00000311745 SENP3-EIF4A1A0A087X0R7 540 aa12.52□□□□□ -0.4
RBFOX1-201ENST00000311745 TMF1P82094 1093 aa12.52□□□□□ -0.41
RBFOX1-201ENST00000311745 USP35Q9P2H5 1018 aa12.52□□□□□ -0.41
RBFOX1-201ENST00000311745 SBNO2Q9Y2G9 1366 aa12.52□□□□□ -0.41
RBFOX1-201ENST00000311745 ARXQ96QS3 562 aa12.52□□□□□ -0.41
RBFOX1-201ENST00000311745 PLCD3Q8N3E9 789 aa12.51□□□□□ -0.41
RBFOX1-201ENST00000311745 TULP4Q9NRJ4 1543 aa12.51□□□□□ -0.41
RBFOX1-201ENST00000311745 NLRP13Q86W25 1043 aa12.51□□□□□ -0.41
RBFOX1-201ENST00000311745 NUDCQ9Y266 331 aa12.51□□□□□ -0.41
RBFOX1-201ENST00000311745 NPC1L1Q9UHC9 1359 aa12.5□□□□□ -0.41
RBFOX1-201ENST00000311745 FRAT1Q92837 279 aaPredicted RBP12.5□□□□□ -0.41
RBFOX1-201ENST00000311745 CANXP27824 592 aaKnown RBP12.5□□□□□ -0.41
RBFOX1-201ENST00000311745 CC2D1BQ5T0F9 858 aaKnown RBP12.49□□□□□ -0.41
RBFOX1-201ENST00000311745 TMC1Q8TDI8 760 aa12.49□□□□□ -0.41
RBFOX1-201ENST00000311745 PHF23Q9BUL5 403 aaPredicted RBP12.49□□□□□ -0.41
RBFOX1-201ENST00000311745 CLTCQ00610 1675 aaKnown RBP12.48□□□□□ -0.41
RBFOX1-201ENST00000311745 NPM1P06748 294 aaKnown RBP eCLIP12.48□□□□□ -0.41
RBFOX1-201ENST00000311745 CARD14Q9BXL6 1004 aa12.48□□□□□ -0.41
RBFOX1-201ENST00000311745 C14orf93Q9H972 538 aaKnown RBP12.47□□□□□ -0.41
RBFOX1-201ENST00000311745 AGLP35573 1532 aa12.46□□□□□ -0.41
RBFOX1-201ENST00000311745 ZFYVE9O95405 1425 aa12.46□□□□□ -0.42
RBFOX1-201ENST00000311745 EIF3AQ14152 1382 aaKnown RBP12.45□□□□□ -0.42
RBFOX1-201ENST00000311745 NRXN3Q9Y4C0 1643 aa12.45□□□□□ -0.42
RBFOX1-201ENST00000311745 GTF2E1P29083 439 aaPredicted RBP12.45□□□□□ -0.42
RBFOX1-201ENST00000311745 PPP2R1AP30153 589 aa12.45□□□□□ -0.42
RBFOX1-201ENST00000311745 PNNQ9H307 717 aaKnown RBP12.45□□□□□ -0.42
RBFOX1-201ENST00000311745 GGT6Q6P531 493 aa12.44□□□□□ -0.42
RBFOX1-201ENST00000311745 PTPRMP28827 1452 aa12.44□□□□□ -0.42
RBFOX1-201ENST00000311745 ZNF521Q96K83 1311 aa12.44□□□□□ -0.42
RBFOX1-201ENST00000311745 SPATA31D1Q6ZQQ2 1576 aa12.43□□□□□ -0.42
RBFOX1-201ENST00000311745 RRAGDQ9NQL2 400 aaPredicted RBP12.43□□□□□ -0.42
RBFOX1-201ENST00000311745 PPP4R2Q9NY27 417 aa12.43□□□□□ -0.42
RBFOX1-201ENST00000311745 PLEKHH1Q9ULM0 1364 aa12.43□□□□□ -0.42
RBFOX1-201ENST00000311745 ANKRD26Q9UPS8 1709 aa12.43□□□□□ -0.42
RBFOX1-201ENST00000311745 PRDM4Q9UKN5 801 aa12.42□□□□□ -0.42
RBFOX1-201ENST00000311745 BRD2P25440 801 aaKnown RBP12.42□□□□□ -0.42
RBFOX1-201ENST00000311745 ARHGEF40Q8TER5 1519 aa12.42□□□□□ -0.42
RBFOX1-201ENST00000311745 CDCA7LQ96GN5 454 aa12.42□□□□□ -0.42
RBFOX1-201ENST00000311745 RPGRIP1LQ68CZ1 1315 aa12.42□□□□□ -0.42
RBFOX1-201ENST00000311745 PPM1GO15355 546 aaPredicted RBP12.41□□□□□ -0.42
RBFOX1-201ENST00000311745 CYB5RLQ6IPT4 315 aa12.4□□□□□ -0.42
RBFOX1-201ENST00000311745 ADAMTS8Q9UP79 889 aa12.4□□□□□ -0.42
RBFOX1-201ENST00000311745 ZHX1Q9UKY1 873 aaPredicted RBP12.4□□□□□ -0.42
RBFOX1-201ENST00000311745 ALKQ9UM73 1620 aa12.4□□□□□ -0.42
RBFOX1-201ENST00000311745 CD163L1Q9NR16 1453 aa12.4□□□□□ -0.42
RBFOX1-201ENST00000311745 IDI1Q13907 227 aa12.4□□□□□ -0.43
RBFOX1-201ENST00000311745 ZFP91Q96JP5 570 aaPredicted RBP12.39□□□□□ -0.43
RBFOX1-201ENST00000311745 VGLL3A8MV65 326 aa12.39□□□□□ -0.43
RBFOX1-201ENST00000311745 TMEM132EQ6IEE7 984 aa12.39□□□□□ -0.43
RBFOX1-201ENST00000311745 TULP1O00294 542 aaPredicted RBP12.38□□□□□ -0.43
RBFOX1-201ENST00000311745 IPO4Q8TEX9 1081 aaKnown RBP12.38□□□□□ -0.43
RBFOX1-201ENST00000311745 IQSEC2Q5JU85 1478 aa12.38□□□□□ -0.43
RBFOX1-201ENST00000311745 ARID3AQ99856 593 aa12.38□□□□□ -0.43
RBFOX1-201ENST00000311745 CENPJQ9HC77 1338 aaPredicted RBP12.37□□□□□ -0.43
RBFOX1-201ENST00000311745 NLRP1Q9C000 1473 aa12.37□□□□□ -0.43
RBFOX1-201ENST00000311745 CALD1Q05682 793 aaKnown RBP12.36□□□□□ -0.43
RBFOX1-201ENST00000311745 CDCA8Q53HL2 280 aa12.35□□□□□ -0.43
RBFOX1-201ENST00000311745 A2ML1A8K2U0 1454 aa12.35□□□□□ -0.43
RBFOX1-201ENST00000311745 KNSTRNQ9Y448 316 aa12.35□□□□□ -0.43
RBFOX1-201ENST00000311745 NSD3Q9BZ95 1437 aa12.35□□□□□ -0.43
RBFOX1-201ENST00000311745 RRP1P56182 461 aaKnown RBP12.35□□□□□ -0.43
RBFOX1-201ENST00000311745 NUTM2DQ5VT03 806 aaPredicted RBP12.35□□□□□ -0.43
RBFOX1-201ENST00000311745 TRMT2AQ8IZ69 625 aaKnown RBP12.35□□□□□ -0.43
RBFOX1-201ENST00000311745 TRAK1Q9UPV9 953 aa12.35□□□□□ -0.43
RBFOX1-201ENST00000311745 KIF20BQ96Q89 1820 aa12.34□□□□□ -0.43
RBFOX1-201ENST00000311745 FBXO31Q5XUX0 539 aaPredicted RBP12.34□□□□□ -0.43
RBFOX1-201ENST00000311745 PDE3BQ13370 1112 aa12.34□□□□□ -0.43
RBFOX1-201ENST00000311745 FAM69CQ0P6D2 419 aa12.33□□□□□ -0.44
RBFOX1-201ENST00000311745 KNDC1Q76NI1 1749 aa12.33□□□□□ -0.44
RBFOX1-201ENST00000311745 ADGRB2O60241 1585 aa12.33□□□□□ -0.44
RBFOX1-201ENST00000311745 COL3A1P02461 1466 aaPredicted RBP12.33□□□□□ -0.44
RBFOX1-201ENST00000311745 POLR3AO14802 1390 aaPredicted RBP12.32□□□□□ -0.44
RBFOX1-201ENST00000311745 UBR1Q8IWV7 1749 aa12.32□□□□□ -0.44
RBFOX1-201ENST00000311745 NFKBIBQ15653 356 aa12.32□□□□□ -0.44
RBFOX1-201ENST00000311745 SLC12A5Q9H2X9 1139 aa12.32□□□□□ -0.44
RBFOX1-201ENST00000311745 SPINK5Q9NQ38 1064 aaPredicted RBP12.32□□□□□ -0.44
RBFOX1-201ENST00000311745 DUSP27Q5VZP5 1158 aa12.31□□□□□ -0.44
RBFOX1-201ENST00000311745 SAMD1Q6SPF0 538 aaPredicted RBP12.31□□□□□ -0.44
RBFOX1-201ENST00000311745 DLC1Q96QB1 1528 aa12.31□□□□□ -0.44
RBFOX1-201ENST00000311745 DMRT2Q9Y5R5 561 aa12.31□□□□□ -0.44
RBFOX1-201ENST00000311745 CHGAP10645 457 aaKnown RBP12.31□□□□□ -0.44
RBFOX1-201ENST00000311745 MAPK8IP2Q13387 824 aaPredicted RBP12.31□□□□□ -0.44
RBFOX1-201ENST00000311745 RCAN3Q9UKA8 241 aa12.31□□□□□ -0.44
RBFOX1-201ENST00000311745 YTHDC2Q9H6S0 1430 aaKnown RBP12.3□□□□□ -0.44
RBFOX1-201ENST00000311745 SLC52A1Q9NWF4 448 aa12.3□□□□□ -0.44
RBFOX1-201ENST00000311745 PUS7Q96PZ0 661 aaKnown RBP12.3□□□□□ -0.44
RBFOX1-201ENST00000311745 SECISBP2LQ93073 1101 aaKnown RBP12.29□□□□□ -0.44
RBFOX1-201ENST00000311745 ANKRD36BQ8N2N9 1353 aa12.29□□□□□ -0.44
RBFOX1-201ENST00000311745 EXOC6Q8TAG9 804 aa12.29□□□□□ -0.44
RBFOX1-201ENST00000311745 VGFO15240 615 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms