RNA–Protein interactions for RNA: ENST00000311659.4

UBQLN3-201, Transcript of ubiquilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN3, Length 2,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3-201ENST00000311659 NINLQ9Y2I6 1382 aa10.97□□□□□ -0.65
UBQLN3-201ENST00000311659 BCAR3O75815 825 aa10.97□□□□□ -0.65
UBQLN3-201ENST00000311659 IGHDP01880 384 aa10.97□□□□□ -0.65
UBQLN3-201ENST00000311659 EFCAB6Q5THR3 1501 aa10.97□□□□□ -0.65
UBQLN3-201ENST00000311659 SIGLEC1Q9BZZ2 1709 aa10.97□□□□□ -0.65
UBQLN3-201ENST00000311659 ABCC3O15438 1527 aa10.96□□□□□ -0.66
UBQLN3-201ENST00000311659 AGLP35573 1532 aa10.96□□□□□ -0.66
UBQLN3-201ENST00000311659 CDCA8Q53HL2 280 aa10.96□□□□□ -0.66
UBQLN3-201ENST00000311659 CCDC146Q8IYE0 955 aa10.96□□□□□ -0.66
UBQLN3-201ENST00000311659 E9PSI1 815 aa10.95□□□□□ -0.66
UBQLN3-201ENST00000311659 APAF1O14727 1248 aa10.95□□□□□ -0.66
UBQLN3-201ENST00000311659 FAM43AQ8N2R8 423 aa10.95□□□□□ -0.66
UBQLN3-201ENST00000311659 NEURL4Q96JN8 1562 aa10.95□□□□□ -0.66
UBQLN3-201ENST00000311659 CGNL1Q0VF96 1302 aa10.95□□□□□ -0.66
UBQLN3-201ENST00000311659 PTPRTO14522 1441 aa10.95□□□□□ -0.66
UBQLN3-201ENST00000311659 PDE3AQ14432 1141 aa10.95□□□□□ -0.66
UBQLN3-201ENST00000311659 DMRT2Q9Y5R5 561 aa10.95□□□□□ -0.66
UBQLN3-201ENST00000311659 ZC3H13Q5T200 1668 aaKnown RBP10.95□□□□□ -0.66
UBQLN3-201ENST00000311659 MAPK8IP3Q9UPT6 1336 aa10.94□□□□□ -0.66
UBQLN3-201ENST00000311659 SEC24BO95487 1268 aa10.94□□□□□ -0.66
UBQLN3-201ENST00000311659 CAMSAP1Q5T5Y3 1602 aa10.94□□□□□ -0.66
UBQLN3-201ENST00000311659 MYO3AQ8NEV4 1616 aa10.94□□□□□ -0.66
UBQLN3-201ENST00000311659 NGEFQ8N5V2 710 aa10.94□□□□□ -0.66
UBQLN3-201ENST00000311659 ZMYM3Q14202 1370 aa10.94□□□□□ -0.66
UBQLN3-201ENST00000311659 ERVK-7P63135 1459 aa10.93□□□□□ -0.66
UBQLN3-201ENST00000311659 IFT172Q9UG01 1749 aa10.93□□□□□ -0.66
UBQLN3-201ENST00000311659 CLUAP1Q96AJ1 413 aa10.93□□□□□ -0.66
UBQLN3-201ENST00000311659 STAC3Q96MF2 364 aa10.93□□□□□ -0.66
UBQLN3-201ENST00000311659 CFAP65Q6ZU64 1925 aaKnown RBP10.92□□□□□ -0.66
UBQLN3-201ENST00000311659 NPATQ14207 1427 aa10.92□□□□□ -0.66
UBQLN3-201ENST00000311659 ANTXR1Q9H6X2 564 aa10.92□□□□□ -0.66
UBQLN3-201ENST00000311659 IQSEC2Q5JU85 1478 aa10.92□□□□□ -0.66
UBQLN3-201ENST00000311659 POGKQ9P215 609 aa10.92□□□□□ -0.66
UBQLN3-201ENST00000311659 POLR3AO14802 1390 aaPredicted RBP10.91□□□□□ -0.66
UBQLN3-201ENST00000311659 MLECQ14165 292 aa10.9□□□□□ -0.66
UBQLN3-201ENST00000311659 CENPJQ9HC77 1338 aaPredicted RBP10.9□□□□□ -0.66
UBQLN3-201ENST00000311659 BECN1Q14457 450 aa10.89□□□□□ -0.67
UBQLN3-201ENST00000311659 MYOM2P54296 1465 aa10.89□□□□□ -0.67
UBQLN3-201ENST00000311659 WWC1Q8IX03 1113 aa10.89□□□□□ -0.67
UBQLN3-201ENST00000311659 PANK1Q8TE04 598 aa10.89□□□□□ -0.67
UBQLN3-201ENST00000311659 PPP6R1Q9UPN7 881 aa10.89□□□□□ -0.67
UBQLN3-201ENST00000311659 COG6Q9Y2V7 657 aa10.89□□□□□ -0.67
UBQLN3-201ENST00000311659 CLTCQ00610 1675 aaKnown RBP10.89□□□□□ -0.67
UBQLN3-201ENST00000311659 ARHGAP31Q2M1Z3 1444 aa10.89□□□□□ -0.67
UBQLN3-201ENST00000311659 CARD14Q9BXL6 1004 aa10.88□□□□□ -0.67
UBQLN3-201ENST00000311659 RSPH6AQ9H0K4 717 aa10.88□□□□□ -0.67
UBQLN3-201ENST00000311659 UGGT1Q9NYU2 1555 aa10.88□□□□□ -0.67
UBQLN3-201ENST00000311659 SOCS7O14512 581 aa10.88□□□□□ -0.67
UBQLN3-201ENST00000311659 AAMPQ13685 434 aa10.87□□□□□ -0.67
UBQLN3-201ENST00000311659 TBC1D32Q96NH3 1257 aa10.87□□□□□ -0.67
UBQLN3-201ENST00000311659 KIF1BO60333 1816 aa10.87□□□□□ -0.67
UBQLN3-201ENST00000311659 USP32Q8NFA0 1604 aa10.87□□□□□ -0.67
UBQLN3-201ENST00000311659 PHF23Q9BUL5 403 aaPredicted RBP10.87□□□□□ -0.67
UBQLN3-201ENST00000311659 MROH2AA6NES4 1674 aa10.87□□□□□ -0.67
UBQLN3-201ENST00000311659 SLKQ9H2G2 1235 aaPredicted RBP10.86□□□□□ -0.67
UBQLN3-201ENST00000311659 NOS1P29475 1434 aa10.86□□□□□ -0.67
UBQLN3-201ENST00000311659 SBNO2Q9Y2G9 1366 aa10.86□□□□□ -0.67
UBQLN3-201ENST00000311659 PREX1Q8TCU6 1659 aa10.85□□□□□ -0.67
UBQLN3-201ENST00000311659 EIF5BO60841 1220 aaKnown RBP10.85□□□□□ -0.67
UBQLN3-201ENST00000311659 RARSP54136 660 aaKnown RBP10.85□□□□□ -0.67
UBQLN3-201ENST00000311659 PMFBP1Q8TBY8 1022 aa10.85□□□□□ -0.67
UBQLN3-201ENST00000311659 TBC1D2Q9BYX2 928 aa10.85□□□□□ -0.67
UBQLN3-201ENST00000311659 PCDHB15Q9Y5E8 787 aa10.85□□□□□ -0.67
UBQLN3-201ENST00000311659 NRXN1Q9ULB1 1477 aa10.85□□□□□ -0.67
UBQLN3-201ENST00000311659 L1TD1Q5T7N2 865 aaKnown RBP10.85□□□□□ -0.67
UBQLN3-201ENST00000311659 ESF1Q9H501 851 aaKnown RBP10.85□□□□□ -0.67
UBQLN3-201ENST00000311659 RRAGDQ9NQL2 400 aaPredicted RBP10.85□□□□□ -0.67
UBQLN3-201ENST00000311659 RLBP1P12271 317 aa10.84□□□□□ -0.67
UBQLN3-201ENST00000311659 SETBP1Q9Y6X0 1596 aa10.84□□□□□ -0.67
UBQLN3-201ENST00000311659 CANXP27824 592 aaKnown RBP10.84□□□□□ -0.67
UBQLN3-201ENST00000311659 PIK3C2BO00750 1634 aa10.83□□□□□ -0.68
UBQLN3-201ENST00000311659 ADGRB2O60241 1585 aa10.83□□□□□ -0.68
UBQLN3-201ENST00000311659 PDZRN3Q9UPQ7 1066 aa10.83□□□□□ -0.68
UBQLN3-201ENST00000311659 QRICH2Q9H0J4 1663 aa10.83□□□□□ -0.68
UBQLN3-201ENST00000311659 FSD2A1L4K1 749 aa10.83□□□□□ -0.68
UBQLN3-201ENST00000311659 TNNQ9UQP3 1299 aa10.83□□□□□ -0.68
UBQLN3-201ENST00000311659 CFAP70Q5T0N1 1121 aa10.82□□□□□ -0.68
UBQLN3-201ENST00000311659 UPF2Q9HAU5 1272 aaKnown RBP10.82□□□□□ -0.68
UBQLN3-201ENST00000311659 ADGRB3O60242 1522 aa10.81□□□□□ -0.68
UBQLN3-201ENST00000311659 FBXO31Q5XUX0 539 aaPredicted RBP10.81□□□□□ -0.68
UBQLN3-201ENST00000311659 WDR63Q8IWG1 891 aa10.81□□□□□ -0.68
UBQLN3-201ENST00000311659 RUNDC1Q96C34 613 aa10.81□□□□□ -0.68
UBQLN3-201ENST00000311659 NSD3Q9BZ95 1437 aa10.81□□□□□ -0.68
UBQLN3-201ENST00000311659 CHGAP10645 457 aaKnown RBP10.8□□□□□ -0.68
UBQLN3-201ENST00000311659 CCDC27Q2M243 656 aa10.8□□□□□ -0.68
UBQLN3-201ENST00000311659 FER1L4A9Z1Z3 1794 aa10.8□□□□□ -0.68
UBQLN3-201ENST00000311659 XRCC6P12956 609 aaKnown RBP eCLIP10.8□□□□□ -0.68
UBQLN3-201ENST00000311659 TCP11L2Q8N4U5 519 aa10.8□□□□□ -0.68
UBQLN3-201ENST00000311659 SLC52A1Q9NWF4 448 aa10.8□□□□□ -0.68
UBQLN3-201ENST00000311659 SPATA31D1Q6ZQQ2 1576 aa10.8□□□□□ -0.68
UBQLN3-201ENST00000311659 ADGRF5Q8IZF2 1346 aa10.8□□□□□ -0.68
UBQLN3-201ENST00000311659 PPLO60437 1756 aa10.79□□□□□ -0.68
UBQLN3-201ENST00000311659 MCM4P33991 863 aa10.79□□□□□ -0.68
UBQLN3-201ENST00000311659 IDI1Q13907 227 aa10.79□□□□□ -0.68
UBQLN3-201ENST00000311659 NCBP3Q53F19 620 aaKnown RBP10.79□□□□□ -0.68
UBQLN3-201ENST00000311659 RWDD1Q9H446 243 aaPredicted RBP10.79□□□□□ -0.68
UBQLN3-201ENST00000311659 RRP7AQ9Y3A4 280 aaKnown RBP10.78□□□□□ -0.68
UBQLN3-201ENST00000311659 NCOA3Q9Y6Q9 1424 aa10.78□□□□□ -0.68
UBQLN3-201ENST00000311659 ADGRB1O14514 1584 aa10.78□□□□□ -0.68
UBQLN3-201ENST00000311659 MYO5BQ9ULV0 1848 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms