RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 CWC22Q9HCG8 908 aaKnown RBP15.91■□□□□ 0.14
SNED1-201ENST00000310397 CT47B1P0C2W7 299 aaPredicted RBP15.91■□□□□ 0.14
SNED1-201ENST00000310397 PDCP20941 246 aa15.91■□□□□ 0.14
SNED1-201ENST00000310397 PNISRQ8TF01 805 aaKnown RBP15.91■□□□□ 0.14
SNED1-201ENST00000310397 KAT6BQ8WYB5 2073 aa15.91■□□□□ 0.14
SNED1-201ENST00000310397 HECW1Q76N89 1606 aa15.91■□□□□ 0.14
SNED1-201ENST00000310397 CPLX1O14810 134 aa15.91■□□□□ 0.14
SNED1-201ENST00000310397 C1orf141Q5JVX7 400 aa15.91■□□□□ 0.14
SNED1-201ENST00000310397 CAVIN1Q6NZI2 390 aaKnown RBP15.91■□□□□ 0.14
SNED1-201ENST00000310397 TOMM22Q9NS69 142 aa15.91■□□□□ 0.14
SNED1-201ENST00000310397 CCDC66A2RUB6 948 aa15.9■□□□□ 0.14
SNED1-201ENST00000310397 DDX58O95786 925 aaKnown RBP15.89■□□□□ 0.13
SNED1-201ENST00000310397 PTPRGP23470 1445 aa15.89■□□□□ 0.13
SNED1-201ENST00000310397 RRP9O43818 475 aaKnown RBP15.89■□□□□ 0.13
SNED1-201ENST00000310397 NUTM2DQ5VT03 806 aaPredicted RBP15.89■□□□□ 0.13
SNED1-201ENST00000310397 MNS1Q8NEH6 495 aa15.89■□□□□ 0.13
SNED1-201ENST00000310397 GCC1Q96CN9 775 aa15.89■□□□□ 0.13
SNED1-201ENST00000310397 PLEKHH2Q8IVE3 1493 aa15.89■□□□□ 0.13
SNED1-201ENST00000310397 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.88■□□□□ 0.13
SNED1-201ENST00000310397 TRDNQ13061 729 aa15.88■□□□□ 0.13
SNED1-201ENST00000310397 IL27Q8NEV9 243 aa15.88■□□□□ 0.13
SNED1-201ENST00000310397 CDCA7LQ96GN5 454 aa15.88■□□□□ 0.13
SNED1-201ENST00000310397 FKBP5Q13451 457 aaPredicted RBP15.88■□□□□ 0.13
SNED1-201ENST00000310397 HSP90B2PQ58FF3 399 aa15.88■□□□□ 0.13
SNED1-201ENST00000310397 PSMA5P28066 241 aa15.88■□□□□ 0.13
SNED1-201ENST00000310397 CWC15Q9P013 229 aaKnown RBP15.88■□□□□ 0.13
SNED1-201ENST00000310397 CIZ1Q9ULV3 898 aaPredicted RBP15.88■□□□□ 0.13
SNED1-201ENST00000310397 DHX8Q14562 1220 aaKnown RBP15.88■□□□□ 0.13
SNED1-201ENST00000310397 TSPY26PQ9H489 355 aa15.88■□□□□ 0.13
SNED1-201ENST00000310397 LTV1Q96GA3 475 aaPredicted RBP15.87■□□□□ 0.13
SNED1-201ENST00000310397 G3BP1Q13283 466 aaKnown RBP eCLIP15.87■□□□□ 0.13
SNED1-201ENST00000310397 KIAA1107Q9UPP5 1409 aa15.87■□□□□ 0.13
SNED1-201ENST00000310397 CCDC47Q96A33 483 aaKnown RBP15.86■□□□□ 0.13
SNED1-201ENST00000310397 CFTRP13569 1480 aa15.86■□□□□ 0.13
SNED1-201ENST00000310397 GRPEL1Q9HAV7 217 aa15.86■□□□□ 0.13
SNED1-201ENST00000310397 PPP2R1AP30153 589 aa15.85■□□□□ 0.13
SNED1-201ENST00000310397 CCP110O43303 1012 aa15.85■□□□□ 0.13
SNED1-201ENST00000310397 AK7Q96M32 723 aa15.85■□□□□ 0.13
SNED1-201ENST00000310397 PDZRN3Q9UPQ7 1066 aa15.85■□□□□ 0.13
SNED1-201ENST00000310397 MINK1Q8N4C8 1332 aaPredicted RBP15.85■□□□□ 0.13
SNED1-201ENST00000310397 CNTROBQ8N137 903 aa15.85■□□□□ 0.13
SNED1-201ENST00000310397 TMX4Q9H1E5 349 aaPredicted RBP15.85■□□□□ 0.13
SNED1-201ENST00000310397 MARCH6O60337 910 aa15.84■□□□□ 0.13
SNED1-201ENST00000310397 TCP11L2Q8N4U5 519 aa15.84■□□□□ 0.13
SNED1-201ENST00000310397 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.84■□□□□ 0.13
SNED1-201ENST00000310397 RNF214Q8ND24 703 aa15.83■□□□□ 0.13
SNED1-201ENST00000310397 RUFY1Q96T51 708 aa15.83■□□□□ 0.13
SNED1-201ENST00000310397 MTHFSP49914 203 aa15.83■□□□□ 0.12
SNED1-201ENST00000310397 TRIM5Q9C035 493 aa15.83■□□□□ 0.12
SNED1-201ENST00000310397 SAFBQ15424 915 aaKnown RBP eCLIP15.83■□□□□ 0.12
SNED1-201ENST00000310397 WDR63Q8IWG1 891 aa15.82■□□□□ 0.12
SNED1-201ENST00000310397 OLFM4Q6UX06 510 aa15.82■□□□□ 0.12
SNED1-201ENST00000310397 ESPNB1AK53 854 aa15.82■□□□□ 0.12
SNED1-201ENST00000310397 NEK4P51957 841 aa15.82■□□□□ 0.12
SNED1-201ENST00000310397 K7ELQ4 463 aaPredicted RBP15.82■□□□□ 0.12
SNED1-201ENST00000310397 SDF4Q9BRK5 362 aa15.82■□□□□ 0.12
SNED1-201ENST00000310397 HIP1O00291 1037 aa15.81■□□□□ 0.12
SNED1-201ENST00000310397 GNAI3P08754 354 aa15.81■□□□□ 0.12
SNED1-201ENST00000310397 KINO60870 393 aaKnown RBP15.81■□□□□ 0.12
SNED1-201ENST00000310397 TSPYL4Q9UJ04 414 aa15.81■□□□□ 0.12
SNED1-201ENST00000310397 PRXQ9BXM0 1461 aa15.81■□□□□ 0.12
SNED1-201ENST00000310397 PRPF40AO75400 957 aaKnown RBP15.81■□□□□ 0.12
SNED1-201ENST00000310397 CDR1P51861 262 aa15.81■□□□□ 0.12
SNED1-201ENST00000310397 ZNF644Q9H582 1327 aaPredicted RBP15.81■□□□□ 0.12
SNED1-201ENST00000310397 MCM4P33991 863 aa15.81■□□□□ 0.12
SNED1-201ENST00000310397 ERCC4Q92889 916 aaPredicted RBP15.8■□□□□ 0.12
SNED1-201ENST00000310397 ARHGAP5Q13017 1502 aa15.8■□□□□ 0.12
SNED1-201ENST00000310397 UBTFL1P0CB47 393 aaPredicted RBP15.8■□□□□ 0.12
SNED1-201ENST00000310397 PDIA4P13667 645 aaKnown RBP15.8■□□□□ 0.12
SNED1-201ENST00000310397 ANO8Q9HCE9 1232 aaPredicted RBP15.8■□□□□ 0.12
SNED1-201ENST00000310397 EIF2S2P20042 333 aaKnown RBP15.8■□□□□ 0.12
SNED1-201ENST00000310397 PCMTD1Q96MG8 357 aaPredicted RBP15.8■□□□□ 0.12
SNED1-201ENST00000310397 PKNOX2Q96KN3 472 aa15.79■□□□□ 0.12
SNED1-201ENST00000310397 CCDC192P0DO97 292 aa15.79■□□□□ 0.12
SNED1-201ENST00000310397 TTC5Q8N0Z6 440 aa15.79■□□□□ 0.12
SNED1-201ENST00000310397 WDR33Q9C0J8 1336 aaKnown RBP15.79■□□□□ 0.12
SNED1-201ENST00000310397 RAD54L2Q9Y4B4 1467 aa15.78■□□□□ 0.12
SNED1-201ENST00000310397 APPP05067 770 aa15.78■□□□□ 0.12
SNED1-201ENST00000310397 RALYLQ86SE5 291 aaKnown RBP15.78■□□□□ 0.12
SNED1-201ENST00000310397 CLASRPQ8N2M8 674 aaKnown RBP15.78■□□□□ 0.12
SNED1-201ENST00000310397 ERICH2A1L162 156 aa15.78■□□□□ 0.12
SNED1-201ENST00000310397 NUTM2FA1L443 756 aa15.78■□□□□ 0.12
SNED1-201ENST00000310397 ZNF428Q96B54 188 aa15.77■□□□□ 0.12
SNED1-201ENST00000310397 MVPQ14764 893 aaKnown RBP15.77■□□□□ 0.12
SNED1-201ENST00000310397 AMOTL1Q8IY63 956 aa15.77■□□□□ 0.11
SNED1-201ENST00000310397 PTPN23Q9H3S7 1636 aa15.77■□□□□ 0.11
SNED1-201ENST00000310397 ATF7IPQ6VMQ6 1270 aa15.76■□□□□ 0.11
SNED1-201ENST00000310397 ERBINQ96RT1 1412 aa15.76■□□□□ 0.11
SNED1-201ENST00000310397 HMOX1P09601 288 aa15.76■□□□□ 0.11
SNED1-201ENST00000310397 CCDC9Q9Y3X0 531 aaKnown RBP15.76■□□□□ 0.11
SNED1-201ENST00000310397 C9orf84Q5VXU9 1444 aa15.76■□□□□ 0.11
SNED1-201ENST00000310397 MAP3K1Q13233 1512 aa15.76■□□□□ 0.11
SNED1-201ENST00000310397 AEBP1Q8IUX7 1158 aa15.76■□□□□ 0.11
SNED1-201ENST00000310397 ANKRD1Q15327 319 aa15.75■□□□□ 0.11
SNED1-201ENST00000310397 GTF2E1P29083 439 aaPredicted RBP15.75■□□□□ 0.11
SNED1-201ENST00000310397 NFXL1Q6ZNB6 911 aa15.75■□□□□ 0.11
SNED1-201ENST00000310397 CCDC30Q5VVM6 783 aa15.75■□□□□ 0.11
SNED1-201ENST00000310397 BCAR3O75815 825 aa15.75■□□□□ 0.11
SNED1-201ENST00000310397 DHX16O60231 1041 aaKnown RBP15.74■□□□□ 0.11
SNED1-201ENST00000310397 NOB1Q9ULX3 412 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms