RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 NINLQ9Y2I6 1382 aa19.32■□□□□ 0.68
EIF3F-201ENST00000309828 RALBP1Q15311 655 aa19.3■□□□□ 0.68
EIF3F-201ENST00000309828 ATAD2Q6PL18 1390 aa19.3■□□□□ 0.68
EIF3F-201ENST00000309828 PTCH1Q13635 1447 aa19.28■□□□□ 0.68
EIF3F-201ENST00000309828 SAFB2Q14151 953 aaKnown RBP eCLIP19.28■□□□□ 0.68
EIF3F-201ENST00000309828 SLC26A8Q96RN1 970 aa19.28■□□□□ 0.68
EIF3F-201ENST00000309828 NPC1L1Q9UHC9 1359 aa19.28■□□□□ 0.68
EIF3F-201ENST00000309828 MINK1Q8N4C8 1332 aaPredicted RBP19.27■□□□□ 0.68
EIF3F-201ENST00000309828 PTPRUQ92729 1446 aa19.26■□□□□ 0.67
EIF3F-201ENST00000309828 WAPLQ7Z5K2 1190 aa19.26■□□□□ 0.67
EIF3F-201ENST00000309828 KNSTRNQ9Y448 316 aa19.26■□□□□ 0.67
EIF3F-201ENST00000309828 PLEKHH1Q9ULM0 1364 aa19.26■□□□□ 0.67
EIF3F-201ENST00000309828 XRN1Q8IZH2 1706 aaKnown RBP19.25■□□□□ 0.67
EIF3F-201ENST00000309828 PARD3Q8TEW0 1356 aa19.25■□□□□ 0.67
EIF3F-201ENST00000309828 ROBO2Q9HCK4 1378 aa19.25■□□□□ 0.67
EIF3F-201ENST00000309828 NPHP4O75161 1426 aaPredicted RBP19.25■□□□□ 0.67
EIF3F-201ENST00000309828 ADGRB2O60241 1585 aa19.24■□□□□ 0.67
EIF3F-201ENST00000309828 SRPK2P78362 688 aaKnown RBP19.24■□□□□ 0.67
EIF3F-201ENST00000309828 CDK19Q9BWU1 502 aa19.23■□□□□ 0.67
EIF3F-201ENST00000309828 CABP2Q9NPB3 220 aa19.23■□□□□ 0.67
EIF3F-201ENST00000309828 AMOTL2Q9Y2J4 779 aa19.23■□□□□ 0.67
EIF3F-201ENST00000309828 ANKRD36BQ8N2N9 1353 aa19.22■□□□□ 0.67
EIF3F-201ENST00000309828 FBXO41Q8TF61 875 aa19.22■□□□□ 0.67
EIF3F-201ENST00000309828 MYBBP1AQ9BQG0 1328 aaKnown RBP19.22■□□□□ 0.67
EIF3F-201ENST00000309828 WASLO00401 505 aaPredicted RBP19.21■□□□□ 0.67
EIF3F-201ENST00000309828 TMC1Q8TDI8 760 aa19.21■□□□□ 0.67
EIF3F-201ENST00000309828 AMER1Q5JTC6 1135 aaPredicted RBP19.2■□□□□ 0.66
EIF3F-201ENST00000309828 SLC12A5Q9H2X9 1139 aa19.2■□□□□ 0.66
EIF3F-201ENST00000309828 USP32Q8NFA0 1604 aa19.2■□□□□ 0.66
EIF3F-201ENST00000309828 CENPBP07199 599 aaPredicted RBP19.18■□□□□ 0.66
EIF3F-201ENST00000309828 CHD2O14647 1828 aaKnown RBP19.18■□□□□ 0.66
EIF3F-201ENST00000309828 BRD4O60885 1362 aaPredicted RBP19.18■□□□□ 0.66
EIF3F-201ENST00000309828 YTHDC1Q96MU7 727 aaKnown RBP19.17■□□□□ 0.66
EIF3F-201ENST00000309828 CARD14Q9BXL6 1004 aa19.17■□□□□ 0.66
EIF3F-201ENST00000309828 MRS2Q9HD23 443 aa19.17■□□□□ 0.66
EIF3F-201ENST00000309828 TERF2IPQ9NYB0 399 aa19.17■□□□□ 0.66
EIF3F-201ENST00000309828 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.17■□□□□ 0.66
EIF3F-201ENST00000309828 NSD3Q9BZ95 1437 aa19.16■□□□□ 0.66
EIF3F-201ENST00000309828 ATP7BP35670 1465 aa19.16■□□□□ 0.66
EIF3F-201ENST00000309828 CC2D1BQ5T0F9 858 aaKnown RBP19.15■□□□□ 0.66
EIF3F-201ENST00000309828 NLRP13Q86W25 1043 aa19.15■□□□□ 0.66
EIF3F-201ENST00000309828 NCKAP5LQ9HCH0 1330 aa19.14■□□□□ 0.65
EIF3F-201ENST00000309828 NSD2O96028 1365 aa19.14■□□□□ 0.65
EIF3F-201ENST00000309828 LMTK3Q96Q04 1460 aa19.14■□□□□ 0.65
EIF3F-201ENST00000309828 HDGFL2Q7Z4V5 671 aaPredicted RBP19.13■□□□□ 0.65
EIF3F-201ENST00000309828 NWD1Q149M9 1564 aa19.13■□□□□ 0.65
EIF3F-201ENST00000309828 CD163L1Q9NR16 1453 aa19.12■□□□□ 0.65
EIF3F-201ENST00000309828 A0A1W2PP64 1363 aa19.12■□□□□ 0.65
EIF3F-201ENST00000309828 CGNL1Q0VF96 1302 aa19.12■□□□□ 0.65
EIF3F-201ENST00000309828 KCNA6P17658 529 aa19.12■□□□□ 0.65
EIF3F-201ENST00000309828 CNGB1Q14028 1251 aaPredicted RBP19.12■□□□□ 0.65
EIF3F-201ENST00000309828 CCDC184Q52MB2 194 aa19.11■□□□□ 0.65
EIF3F-201ENST00000309828 NUDT16Q96DE0 195 aaKnown RBP19.11■□□□□ 0.65
EIF3F-201ENST00000309828 CABP1Q9NZU7 370 aa19.1■□□□□ 0.65
EIF3F-201ENST00000309828 CCDC61Q9Y6R9 512 aa19.1■□□□□ 0.65
EIF3F-201ENST00000309828 PPIP5K1Q6PFW1 1433 aa19.09■□□□□ 0.65
EIF3F-201ENST00000309828 TOPAZ1Q8N9V7 1692 aa19.08■□□□□ 0.64
EIF3F-201ENST00000309828 CDC42BPGQ6DT37 1551 aa19.07■□□□□ 0.64
EIF3F-201ENST00000309828 CPSF1Q10570 1443 aaKnown RBP19.07■□□□□ 0.64
EIF3F-201ENST00000309828 ANKARQ7Z5J8 1434 aa19.07■□□□□ 0.64
EIF3F-201ENST00000309828 NKTRP30414 1462 aaKnown RBP19.06■□□□□ 0.64
EIF3F-201ENST00000309828 PPP2R1AP30153 589 aa19.06■□□□□ 0.64
EIF3F-201ENST00000309828 PRR36Q9H6K5 1346 aa19.04■□□□□ 0.64
EIF3F-201ENST00000309828 PLEKHG3A1L390 1219 aa19.04■□□□□ 0.64
EIF3F-201ENST00000309828 ITSN1Q15811 1721 aa19.04■□□□□ 0.64
EIF3F-201ENST00000309828 PNISRQ8TF01 805 aaKnown RBP19.04■□□□□ 0.64
EIF3F-201ENST00000309828 ZNF692Q9BU19 519 aaPredicted RBP19.04■□□□□ 0.64
EIF3F-201ENST00000309828 EDC4Q6P2E9 1401 aaKnown RBP19.03■□□□□ 0.64
EIF3F-201ENST00000309828 ADGRL3Q9HAR2 1447 aa19.03■□□□□ 0.64
EIF3F-201ENST00000309828 HSPA2P54652 639 aa19.03■□□□□ 0.64
EIF3F-201ENST00000309828 MORC1Q86VD1 984 aa19.03■□□□□ 0.64
EIF3F-201ENST00000309828 AKAP12Q02952 1782 aa19.03■□□□□ 0.64
EIF3F-201ENST00000309828 FMN2Q9NZ56 1722 aa19.03■□□□□ 0.64
EIF3F-201ENST00000309828 FAM9BQ8IZU0 186 aa19.02■□□□□ 0.64
EIF3F-201ENST00000309828 INSRP06213 1382 aa19.02■□□□□ 0.64
EIF3F-201ENST00000309828 MON2Q7Z3U7 1717 aa19.02■□□□□ 0.63
EIF3F-201ENST00000309828 ANKRD26Q9UPS8 1709 aa19.02■□□□□ 0.63
EIF3F-201ENST00000309828 NALCNQ8IZF0 1738 aa19.01■□□□□ 0.63
EIF3F-201ENST00000309828 KIF20BQ96Q89 1820 aa19■□□□□ 0.63
EIF3F-201ENST00000309828 NCOA3Q9Y6Q9 1424 aa19■□□□□ 0.63
EIF3F-201ENST00000309828 STRCQ7RTU9 1775 aa18.98■□□□□ 0.63
EIF3F-201ENST00000309828 FYB1O15117 783 aa18.97■□□□□ 0.63
EIF3F-201ENST00000309828 POLR3AO14802 1390 aaPredicted RBP18.96■□□□□ 0.63
EIF3F-201ENST00000309828 HNRNPUQ00839 825 aaKnown RBP eCLIP18.95■□□□□ 0.62
EIF3F-201ENST00000309828 PROSER2Q86WR7 435 aaPredicted RBP18.95■□□□□ 0.62
EIF3F-201ENST00000309828 ACEP12821 1306 aa18.95■□□□□ 0.62
EIF3F-201ENST00000309828 NRKQ7Z2Y5 1582 aa18.94■□□□□ 0.62
EIF3F-201ENST00000309828 SCAF1Q9H7N4 1312 aaKnown RBP18.94■□□□□ 0.62
EIF3F-201ENST00000309828 USP6P35125 1406 aa18.93■□□□□ 0.62
EIF3F-201ENST00000309828 CERKQ8TCT0 537 aa18.93■□□□□ 0.62
EIF3F-201ENST00000309828 GGNBP2Q9H3C7 697 aa18.92■□□□□ 0.62
EIF3F-201ENST00000309828 NUTM2FA1L443 756 aa18.91■□□□□ 0.62
EIF3F-201ENST00000309828 C14orf37Q86TY3 774 aa18.91■□□□□ 0.62
EIF3F-201ENST00000309828 TTC21AQ8NDW8 1320 aa18.91■□□□□ 0.62
EIF3F-201ENST00000309828 DCCP43146 1447 aa18.91■□□□□ 0.62
EIF3F-201ENST00000309828 SSH2Q76I76 1423 aa18.91■□□□□ 0.62
EIF3F-201ENST00000309828 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.9■□□□□ 0.62
EIF3F-201ENST00000309828 CFAP53Q96M91 514 aa18.9■□□□□ 0.62
EIF3F-201ENST00000309828 TTC21BQ7Z4L5 1316 aa18.9■□□□□ 0.62
EIF3F-201ENST00000309828 STRCP1A6NGW2 1772 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms