RNA–Protein interactions for RNA: ENST00000308482.13

LRRFIP1-203, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-203ENST00000308482 RTEL1-TNFRSF6BF6WH68 1400 aa18.32■□□□□ 0.52
LRRFIP1-203ENST00000308482 SHPRHQ149N8 1683 aa18.32■□□□□ 0.52
LRRFIP1-203ENST00000308482 CHMP5Q9NZZ3 219 aa18.31■□□□□ 0.52
LRRFIP1-203ENST00000308482 NSD3Q9BZ95 1437 aa18.31■□□□□ 0.52
LRRFIP1-203ENST00000308482 MVPQ14764 893 aaKnown RBP18.31■□□□□ 0.52
LRRFIP1-203ENST00000308482 PHF23Q9BUL5 403 aaPredicted RBP18.31■□□□□ 0.52
LRRFIP1-203ENST00000308482 SLC12A5Q9H2X9 1139 aa18.31■□□□□ 0.52
LRRFIP1-203ENST00000308482 PNNQ9H307 717 aaKnown RBP18.31■□□□□ 0.52
LRRFIP1-203ENST00000308482 PTPRTO14522 1441 aa18.31■□□□□ 0.52
LRRFIP1-203ENST00000308482 IQSEC2Q5JU85 1478 aa18.29■□□□□ 0.52
LRRFIP1-203ENST00000308482 UGGT1Q9NYU2 1555 aa18.29■□□□□ 0.52
LRRFIP1-203ENST00000308482 MTHFSP49914 203 aa18.29■□□□□ 0.52
LRRFIP1-203ENST00000308482 WDR63Q8IWG1 891 aa18.29■□□□□ 0.52
LRRFIP1-203ENST00000308482 AAMPQ13685 434 aa18.29■□□□□ 0.52
LRRFIP1-203ENST00000308482 FTSJ3Q8IY81 847 aaKnown RBP18.29■□□□□ 0.52
LRRFIP1-203ENST00000308482 STAC3Q96MF2 364 aa18.29■□□□□ 0.52
LRRFIP1-203ENST00000308482 ZMYM3Q14202 1370 aa18.29■□□□□ 0.52
LRRFIP1-203ENST00000308482 CLCN1P35523 988 aa18.28■□□□□ 0.52
LRRFIP1-203ENST00000308482 EFCAB2Q5VUJ9 269 aa18.28■□□□□ 0.52
LRRFIP1-203ENST00000308482 TSR2Q969E8 191 aaKnown RBP18.28■□□□□ 0.52
LRRFIP1-203ENST00000308482 SPAG9O60271 1321 aaKnown RBP18.28■□□□□ 0.52
LRRFIP1-203ENST00000308482 ZKSCAN2Q63HK3 967 aa18.26■□□□□ 0.51
LRRFIP1-203ENST00000308482 DZIP1LQ8IYY4 767 aaKnown RBP18.26■□□□□ 0.51
LRRFIP1-203ENST00000308482 ABCA6Q8N139 1617 aa18.26■□□□□ 0.51
LRRFIP1-203ENST00000308482 ZNF692Q9BU19 519 aaPredicted RBP18.26■□□□□ 0.51
LRRFIP1-203ENST00000308482 PLCH2O75038 1416 aa18.26■□□□□ 0.51
LRRFIP1-203ENST00000308482 TRAK1Q9UPV9 953 aa18.25■□□□□ 0.51
LRRFIP1-203ENST00000308482 MRE11P49959 708 aa18.25■□□□□ 0.51
LRRFIP1-203ENST00000308482 GRPEL1Q9HAV7 217 aa18.25■□□□□ 0.51
LRRFIP1-203ENST00000308482 ERBB4Q15303 1308 aa18.24■□□□□ 0.51
LRRFIP1-203ENST00000308482 HSCBQ8IWL3 235 aa18.24■□□□□ 0.51
LRRFIP1-203ENST00000308482 U2AF1L5P0DN76 240 aaPredicted RBP18.23■□□□□ 0.51
LRRFIP1-203ENST00000308482 TRIM27P14373 513 aa18.23■□□□□ 0.51
LRRFIP1-203ENST00000308482 U2AF1Q01081 240 aaKnown RBP eCLIP18.23■□□□□ 0.51
LRRFIP1-203ENST00000308482 MYH16Q9H6N6 1097 aa18.23■□□□□ 0.51
LRRFIP1-203ENST00000308482 ABCC1P33527 1531 aa18.23■□□□□ 0.51
LRRFIP1-203ENST00000308482 ITPRIPQ8IWB1 547 aa18.23■□□□□ 0.51
LRRFIP1-203ENST00000308482 SMC4Q9NTJ3 1288 aa18.23■□□□□ 0.51
LRRFIP1-203ENST00000308482 MAP3K4Q9Y6R4 1608 aa18.22■□□□□ 0.51
LRRFIP1-203ENST00000308482 KIAA1210Q9ULL0 1709 aa18.22■□□□□ 0.51
LRRFIP1-203ENST00000308482 KIF3BO15066 747 aa18.22■□□□□ 0.51
LRRFIP1-203ENST00000308482 EXOSC9Q06265 439 aaKnown RBP18.21■□□□□ 0.51
LRRFIP1-203ENST00000308482 CCDC27Q2M243 656 aa18.21■□□□□ 0.51
LRRFIP1-203ENST00000308482 SLC24A1O60721 1099 aa18.2■□□□□ 0.5
LRRFIP1-203ENST00000308482 GAS2L3Q86XJ1 694 aa18.2■□□□□ 0.5
LRRFIP1-203ENST00000308482 ERCC6L2Q5T890 1561 aa18.2■□□□□ 0.5
LRRFIP1-203ENST00000308482 SSH1Q8WYL5 1049 aa18.2■□□□□ 0.5
LRRFIP1-203ENST00000308482 ZNF518AQ6AHZ1 1483 aa18.2■□□□□ 0.5
LRRFIP1-203ENST00000308482 DDX11L8A8MPP1 907 aa18.19■□□□□ 0.5
LRRFIP1-203ENST00000308482 CHGAP10645 457 aaKnown RBP18.19■□□□□ 0.5
LRRFIP1-203ENST00000308482 HDAC1Q13547 482 aaPredicted RBP18.19■□□□□ 0.5
LRRFIP1-203ENST00000308482 TNPO1Q92973 898 aaKnown RBP18.19■□□□□ 0.5
LRRFIP1-203ENST00000308482 CFAP53Q96M91 514 aa18.19■□□□□ 0.5
LRRFIP1-203ENST00000308482 FOXD4L1Q9NU39 408 aa18.19■□□□□ 0.5
LRRFIP1-203ENST00000308482 KANK1Q14678 1352 aa18.18■□□□□ 0.5
LRRFIP1-203ENST00000308482 TET3O43151 1660 aa18.18■□□□□ 0.5
LRRFIP1-203ENST00000308482 ESPNB1AK53 854 aa18.18■□□□□ 0.5
LRRFIP1-203ENST00000308482 DDIT3P35638 169 aa18.18■□□□□ 0.5
LRRFIP1-203ENST00000308482 TMEM132EQ6IEE7 984 aa18.18■□□□□ 0.5
LRRFIP1-203ENST00000308482 HSP90AA1P07900 732 aaKnown RBP18.17■□□□□ 0.5
LRRFIP1-203ENST00000308482 ZFYVE16Q7Z3T8 1539 aa18.17■□□□□ 0.5
LRRFIP1-203ENST00000308482 LNPKQ9C0E8 428 aa18.17■□□□□ 0.5
LRRFIP1-203ENST00000308482 NOB1Q9ULX3 412 aaKnown RBP18.17■□□□□ 0.5
LRRFIP1-203ENST00000308482 MYOM2P54296 1465 aa18.17■□□□□ 0.5
LRRFIP1-203ENST00000308482 SHROOM2Q13796 1616 aa18.17■□□□□ 0.5
LRRFIP1-203ENST00000308482 TMEM57Q8N5G2 664 aa18.16■□□□□ 0.5
LRRFIP1-203ENST00000308482 HSP90AA2PQ14568 343 aaPredicted RBP18.16■□□□□ 0.5
LRRFIP1-203ENST00000308482 SMC5Q8IY18 1101 aa18.16■□□□□ 0.5
LRRFIP1-203ENST00000308482 NCOA3Q9Y6Q9 1424 aa18.15■□□□□ 0.5
LRRFIP1-203ENST00000308482 SBNO2Q9Y2G9 1366 aa18.15■□□□□ 0.5
LRRFIP1-203ENST00000308482 ATF7IPQ6VMQ6 1270 aa18.15■□□□□ 0.5
LRRFIP1-203ENST00000308482 DDX19BQ9UMR2 479 aa18.15■□□□□ 0.5
LRRFIP1-203ENST00000308482 NOS1P29475 1434 aa18.15■□□□□ 0.5
LRRFIP1-203ENST00000308482 DEPDC5O75140 1603 aa18.14■□□□□ 0.5
LRRFIP1-203ENST00000308482 CD2BP2O95400 341 aaKnown RBP18.14■□□□□ 0.49
LRRFIP1-203ENST00000308482 U2SURPO15042 1029 aaKnown RBP18.13■□□□□ 0.49
LRRFIP1-203ENST00000308482 HSP90AB1P08238 724 aaKnown RBP18.13■□□□□ 0.49
LRRFIP1-203ENST00000308482 RBM25P49756 843 aaKnown RBP18.13■□□□□ 0.49
LRRFIP1-203ENST00000308482 VSIG10Q8N0Z9 540 aa18.13■□□□□ 0.49
LRRFIP1-203ENST00000308482 MROH2AA6NES4 1674 aa18.13■□□□□ 0.49
LRRFIP1-203ENST00000308482 MYO3AQ8NEV4 1616 aa18.12■□□□□ 0.49
LRRFIP1-203ENST00000308482 ZBTB40Q9NUA8 1239 aa18.12■□□□□ 0.49
LRRFIP1-203ENST00000308482 TRIM35Q9UPQ4 493 aa18.12■□□□□ 0.49
LRRFIP1-203ENST00000308482 CD109Q6YHK3 1445 aa18.12■□□□□ 0.49
LRRFIP1-203ENST00000308482 TRIM44Q96DX7 344 aaPredicted RBP18.11■□□□□ 0.49
LRRFIP1-203ENST00000308482 SNX21Q969T3 373 aa18.11■□□□□ 0.49
LRRFIP1-203ENST00000308482 GLIPR1L2Q4G1C9 344 aa18.1■□□□□ 0.49
LRRFIP1-203ENST00000308482 KIF2CQ99661 725 aa18.1■□□□□ 0.49
LRRFIP1-203ENST00000308482 RBM42Q9BTD8 480 aaKnown RBP18.1■□□□□ 0.49
LRRFIP1-203ENST00000308482 VWDEQ8N2E2 1590 aa18.1■□□□□ 0.49
LRRFIP1-203ENST00000308482 TMPOP42166 694 aaKnown RBP18.1■□□□□ 0.49
LRRFIP1-203ENST00000308482 NUCB1Q02818 461 aa18.1■□□□□ 0.49
LRRFIP1-203ENST00000308482 RAB3GAP1Q15042 981 aa18.1■□□□□ 0.49
LRRFIP1-203ENST00000308482 KIF1BO60333 1816 aa18.09■□□□□ 0.49
LRRFIP1-203ENST00000308482 RRP9O43818 475 aaKnown RBP18.08■□□□□ 0.49
LRRFIP1-203ENST00000308482 PLEKHF1Q96S99 279 aa18.08■□□□□ 0.49
LRRFIP1-203ENST00000308482 QRICH2Q9H0J4 1663 aa18.08■□□□□ 0.49
LRRFIP1-203ENST00000308482 IFT172Q9UG01 1749 aa18.08■□□□□ 0.48
LRRFIP1-203ENST00000308482 PKNOX2Q96KN3 472 aa18.08■□□□□ 0.48
LRRFIP1-203ENST00000308482 GBP4Q96PP9 640 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms