RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 TRAK1Q9UPV9 953 aa9.68□□□□□ -0.86
PTCD2-201ENST00000308077 DCAF8L1A6NGE4 600 aa9.67□□□□□ -0.86
PTCD2-201ENST00000308077 POLR3GLQ9BT43 218 aa9.67□□□□□ -0.86
PTCD2-201ENST00000308077 LTKP29376 864 aa9.67□□□□□ -0.86
PTCD2-201ENST00000308077 YTHDC2Q9H6S0 1430 aaKnown RBP9.66□□□□□ -0.86
PTCD2-201ENST00000308077 TMF1P82094 1093 aa9.66□□□□□ -0.86
PTCD2-201ENST00000308077 CENPJQ9HC77 1338 aaPredicted RBP9.66□□□□□ -0.86
PTCD2-201ENST00000308077 MYOM1P52179 1685 aa9.66□□□□□ -0.86
PTCD2-201ENST00000308077 SBNO2Q9Y2G9 1366 aa9.65□□□□□ -0.86
PTCD2-201ENST00000308077 ADAMTS13Q76LX8 1427 aa9.65□□□□□ -0.86
PTCD2-201ENST00000308077 PLEKHG1Q9ULL1 1385 aa9.65□□□□□ -0.86
PTCD2-201ENST00000308077 HDGFP51858 240 aaKnown RBP9.64□□□□□ -0.87
PTCD2-201ENST00000308077 METP08581 1390 aa9.64□□□□□ -0.87
PTCD2-201ENST00000308077 KCNA4P22459 653 aa9.64□□□□□ -0.87
PTCD2-201ENST00000308077 THEMISQ8N1K5 641 aaPredicted RBP9.64□□□□□ -0.87
PTCD2-201ENST00000308077 KNDC1Q76NI1 1749 aa9.64□□□□□ -0.87
PTCD2-201ENST00000308077 MED14O60244 1454 aa9.63□□□□□ -0.87
PTCD2-201ENST00000308077 TXNDC2Q86VQ3 553 aa9.63□□□□□ -0.87
PTCD2-201ENST00000308077 TNS4Q8IZW8 715 aa9.63□□□□□ -0.87
PTCD2-201ENST00000308077 STK26Q9P289 416 aa9.63□□□□□ -0.87
PTCD2-201ENST00000308077 DLC1Q96QB1 1528 aa9.63□□□□□ -0.87
PTCD2-201ENST00000308077 LRPPRCP42704 1394 aaKnown RBP9.63□□□□□ -0.87
PTCD2-201ENST00000308077 TULP4Q9NRJ4 1543 aa9.63□□□□□ -0.87
PTCD2-201ENST00000308077 ANP32CO43423 234 aa9.62□□□□□ -0.87
PTCD2-201ENST00000308077 RGS12O14924 1447 aa9.62□□□□□ -0.87
PTCD2-201ENST00000308077 EID1Q9Y6B2 187 aa9.61□□□□□ -0.87
PTCD2-201ENST00000308077 NCKAP5LQ9HCH0 1330 aa9.61□□□□□ -0.87
PTCD2-201ENST00000308077 ABCC11Q96J66 1382 aa9.6□□□□□ -0.87
PTCD2-201ENST00000308077 FAM135BQ49AJ0 1406 aa9.6□□□□□ -0.87
PTCD2-201ENST00000308077 PRAM1Q96QH2 718 aa9.6□□□□□ -0.87
PTCD2-201ENST00000308077 DIP2AQ14689 1571 aa9.6□□□□□ -0.87
PTCD2-201ENST00000308077 TECPR2O15040 1411 aa9.6□□□□□ -0.87
PTCD2-201ENST00000308077 BCL9LQ86UU0 1499 aa9.6□□□□□ -0.87
PTCD2-201ENST00000308077 SAFB2Q14151 953 aaKnown RBP eCLIP9.6□□□□□ -0.87
PTCD2-201ENST00000308077 CDCA8Q53HL2 280 aa9.6□□□□□ -0.87
PTCD2-201ENST00000308077 BCANQ96GW7 911 aa9.6□□□□□ -0.87
PTCD2-201ENST00000308077 NWD1Q149M9 1564 aa9.6□□□□□ -0.87
PTCD2-201ENST00000308077 PLEKHH1Q9ULM0 1364 aa9.59□□□□□ -0.87
PTCD2-201ENST00000308077 PTPRUQ92729 1446 aa9.59□□□□□ -0.87
PTCD2-201ENST00000308077 SLC24A1O60721 1099 aa9.59□□□□□ -0.87
PTCD2-201ENST00000308077 SLC26A8Q96RN1 970 aa9.58□□□□□ -0.88
PTCD2-201ENST00000308077 PRKRIP1Q9H875 184 aaPredicted RBP9.58□□□□□ -0.88
PTCD2-201ENST00000308077 PER1O15534 1290 aaPredicted RBP9.58□□□□□ -0.88
PTCD2-201ENST00000308077 WAPLQ7Z5K2 1190 aa9.57□□□□□ -0.88
PTCD2-201ENST00000308077 PANK3Q9H999 370 aa9.57□□□□□ -0.88
PTCD2-201ENST00000308077 POGKQ9P215 609 aa9.57□□□□□ -0.88
PTCD2-201ENST00000308077 MINK1Q8N4C8 1332 aaPredicted RBP9.57□□□□□ -0.88
PTCD2-201ENST00000308077 CCER2I3L3R5 266 aa9.57□□□□□ -0.88
PTCD2-201ENST00000308077 GIGYF1O75420 1035 aaPredicted RBP9.57□□□□□ -0.88
PTCD2-201ENST00000308077 EVC2Q86UK5 1308 aa9.57□□□□□ -0.88
PTCD2-201ENST00000308077 XRN1Q8IZH2 1706 aaKnown RBP9.57□□□□□ -0.88
PTCD2-201ENST00000308077 TBX22Q9Y458 520 aa9.57□□□□□ -0.88
PTCD2-201ENST00000308077 ROBO2Q9HCK4 1378 aa9.56□□□□□ -0.88
PTCD2-201ENST00000308077 NUTM2BA6NNL0 878 aaPredicted RBP9.56□□□□□ -0.88
PTCD2-201ENST00000308077 NUTM2EB1AL46 878 aaPredicted RBP9.56□□□□□ -0.88
PTCD2-201ENST00000308077 NUTM2AQ8IVF1 878 aaPredicted RBP9.56□□□□□ -0.88
PTCD2-201ENST00000308077 COL13A1Q5TAT6 717 aaPredicted RBP9.56□□□□□ -0.88
PTCD2-201ENST00000308077 ANKLE2Q86XL3 938 aa9.56□□□□□ -0.88
PTCD2-201ENST00000308077 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.55□□□□□ -0.88
PTCD2-201ENST00000308077 SIRT1Q96EB6 747 aa9.55□□□□□ -0.88
PTCD2-201ENST00000308077 CNGB1Q14028 1251 aaPredicted RBP9.54□□□□□ -0.88
PTCD2-201ENST00000308077 PUS7Q96PZ0 661 aaKnown RBP9.54□□□□□ -0.88
PTCD2-201ENST00000308077 CABP2Q9NPB3 220 aa9.54□□□□□ -0.88
PTCD2-201ENST00000308077 CHD2O14647 1828 aaKnown RBP9.54□□□□□ -0.88
PTCD2-201ENST00000308077 JCADQ9P266 1359 aa9.54□□□□□ -0.88
PTCD2-201ENST00000308077 CHD4Q14839 1912 aa9.54□□□□□ -0.88
PTCD2-201ENST00000308077 NPHP4O75161 1426 aaPredicted RBP9.54□□□□□ -0.88
PTCD2-201ENST00000308077 PTCH1Q13635 1447 aa9.54□□□□□ -0.88
PTCD2-201ENST00000308077 ADGRB2O60241 1585 aa9.53□□□□□ -0.88
PTCD2-201ENST00000308077 CCDC184Q52MB2 194 aa9.53□□□□□ -0.88
PTCD2-201ENST00000308077 YTHDC1Q96MU7 727 aaKnown RBP9.53□□□□□ -0.88
PTCD2-201ENST00000308077 AMOTL2Q9Y2J4 779 aa9.53□□□□□ -0.88
PTCD2-201ENST00000308077 ADRA2BP18089 450 aa9.53□□□□□ -0.88
PTCD2-201ENST00000308077 SLC12A5Q9H2X9 1139 aa9.53□□□□□ -0.88
PTCD2-201ENST00000308077 PARD3Q8TEW0 1356 aa9.52□□□□□ -0.88
PTCD2-201ENST00000308077 PIK3R4Q99570 1358 aa9.52□□□□□ -0.88
PTCD2-201ENST00000308077 SRPK2P78362 688 aaKnown RBP9.52□□□□□ -0.89
PTCD2-201ENST00000308077 CDK19Q9BWU1 502 aa9.52□□□□□ -0.89
PTCD2-201ENST00000308077 CARD14Q9BXL6 1004 aa9.52□□□□□ -0.89
PTCD2-201ENST00000308077 KTN1Q86UP2 1357 aaKnown RBP9.52□□□□□ -0.89
PTCD2-201ENST00000308077 TMC1Q8TDI8 760 aa9.51□□□□□ -0.89
PTCD2-201ENST00000308077 AMER1Q5JTC6 1135 aaPredicted RBP9.51□□□□□ -0.89
PTCD2-201ENST00000308077 CD163L1Q9NR16 1453 aa9.51□□□□□ -0.89
PTCD2-201ENST00000308077 USP32Q8NFA0 1604 aa9.5□□□□□ -0.89
PTCD2-201ENST00000308077 CC2D1BQ5T0F9 858 aaKnown RBP9.5□□□□□ -0.89
PTCD2-201ENST00000308077 KNSTRNQ9Y448 316 aa9.5□□□□□ -0.89
PTCD2-201ENST00000308077 AATKQ6ZMQ8 1374 aa9.5□□□□□ -0.89
PTCD2-201ENST00000308077 SPATA31A6Q5VVP1 1343 aa9.5□□□□□ -0.89
PTCD2-201ENST00000308077 NSD3Q9BZ95 1437 aa9.5□□□□□ -0.89
PTCD2-201ENST00000308077 WASLO00401 505 aaPredicted RBP9.5□□□□□ -0.89
PTCD2-201ENST00000308077 KCNA6P17658 529 aa9.5□□□□□ -0.89
PTCD2-201ENST00000308077 RALBP1Q15311 655 aa9.5□□□□□ -0.89
PTCD2-201ENST00000308077 ANKRD36BQ8N2N9 1353 aa9.5□□□□□ -0.89
PTCD2-201ENST00000308077 NINLQ9Y2I6 1382 aa9.5□□□□□ -0.89
PTCD2-201ENST00000308077 NPC1L1Q9UHC9 1359 aa9.49□□□□□ -0.89
PTCD2-201ENST00000308077 RBM6P78332 1123 aaKnown RBP9.49□□□□□ -0.89
PTCD2-201ENST00000308077 LRP6O75581 1613 aa9.49□□□□□ -0.89
PTCD2-201ENST00000308077 TOPAZ1Q8N9V7 1692 aa9.49□□□□□ -0.89
PTCD2-201ENST00000308077 ATP7BP35670 1465 aa9.49□□□□□ -0.89
PTCD2-201ENST00000308077 A0A1W2PP64 1363 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms