RNA–Protein interactions for RNA: ENST00000307961.10

RPL4-201, Transcript of ribosomal protein L4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL4, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-201ENST00000307961 ADGRF5Q8IZF2 1346 aa13.78□□□□□ -0.2
RPL4-201ENST00000307961 CLTCL1P53675 1640 aa13.77□□□□□ -0.2
RPL4-201ENST00000307961 C22orf23Q9BZE7 217 aa13.77□□□□□ -0.2
RPL4-201ENST00000307961 MFAP1P55081 439 aaKnown RBP13.77□□□□□ -0.21
RPL4-201ENST00000307961 AFAP1Q8N556 730 aa13.77□□□□□ -0.21
RPL4-201ENST00000307961 SPAG9O60271 1321 aaKnown RBP13.77□□□□□ -0.21
RPL4-201ENST00000307961 CEP152O94986 1710 aa13.77□□□□□ -0.21
RPL4-201ENST00000307961 TRAK2O60296 914 aa13.76□□□□□ -0.21
RPL4-201ENST00000307961 CHMP5Q9NZZ3 219 aa13.76□□□□□ -0.21
RPL4-201ENST00000307961 PLCH2O75038 1416 aa13.76□□□□□ -0.21
RPL4-201ENST00000307961 MVPQ14764 893 aaKnown RBP13.76□□□□□ -0.21
RPL4-201ENST00000307961 NSD3Q9BZ95 1437 aa13.75□□□□□ -0.21
RPL4-201ENST00000307961 SLC12A5Q9H2X9 1139 aa13.75□□□□□ -0.21
RPL4-201ENST00000307961 MTHFSP49914 203 aa13.74□□□□□ -0.21
RPL4-201ENST00000307961 FTSJ3Q8IY81 847 aaKnown RBP13.74□□□□□ -0.21
RPL4-201ENST00000307961 ZKSCAN2Q63HK3 967 aa13.73□□□□□ -0.21
RPL4-201ENST00000307961 DZIP1LQ8IYY4 767 aaKnown RBP13.73□□□□□ -0.21
RPL4-201ENST00000307961 PNNQ9H307 717 aaKnown RBP13.73□□□□□ -0.21
RPL4-201ENST00000307961 MYH16Q9H6N6 1097 aa13.73□□□□□ -0.21
RPL4-201ENST00000307961 NAP1L5Q96NT1 182 aaPredicted RBP13.73□□□□□ -0.21
RPL4-201ENST00000307961 CLCN1P35523 988 aa13.72□□□□□ -0.21
RPL4-201ENST00000307961 CCDC27Q2M243 656 aa13.72□□□□□ -0.21
RPL4-201ENST00000307961 IQSEC2Q5JU85 1478 aa13.72□□□□□ -0.21
RPL4-201ENST00000307961 RTEL1-TNFRSF6BF6WH68 1400 aa13.71□□□□□ -0.21
RPL4-201ENST00000307961 KIF3BO15066 747 aa13.71□□□□□ -0.21
RPL4-201ENST00000307961 MRE11P49959 708 aa13.71□□□□□ -0.21
RPL4-201ENST00000307961 SHPRHQ149N8 1683 aa13.71□□□□□ -0.21
RPL4-201ENST00000307961 KIAA1210Q9ULL0 1709 aa13.71□□□□□ -0.22
RPL4-201ENST00000307961 TRAK1Q9UPV9 953 aa13.71□□□□□ -0.22
RPL4-201ENST00000307961 ABCC1P33527 1531 aa13.7□□□□□ -0.22
RPL4-201ENST00000307961 KANK1Q14678 1352 aa13.7□□□□□ -0.22
RPL4-201ENST00000307961 U2AF1L5P0DN76 240 aaPredicted RBP13.7□□□□□ -0.22
RPL4-201ENST00000307961 U2AF1Q01081 240 aaKnown RBP eCLIP13.7□□□□□ -0.22
RPL4-201ENST00000307961 HSCBQ8IWL3 235 aa13.7□□□□□ -0.22
RPL4-201ENST00000307961 TSR2Q969E8 191 aaKnown RBP13.7□□□□□ -0.22
RPL4-201ENST00000307961 CFAP53Q96M91 514 aa13.7□□□□□ -0.22
RPL4-201ENST00000307961 SMC4Q9NTJ3 1288 aa13.69□□□□□ -0.22
RPL4-201ENST00000307961 UGGT1Q9NYU2 1555 aa13.69□□□□□ -0.22
RPL4-201ENST00000307961 SBNO2Q9Y2G9 1366 aa13.69□□□□□ -0.22
RPL4-201ENST00000307961 ABCA6Q8N139 1617 aa13.69□□□□□ -0.22
RPL4-201ENST00000307961 MAP3K4Q9Y6R4 1608 aa13.69□□□□□ -0.22
RPL4-201ENST00000307961 ZNF692Q9BU19 519 aaPredicted RBP13.69□□□□□ -0.22
RPL4-201ENST00000307961 GRPEL1Q9HAV7 217 aa13.69□□□□□ -0.22
RPL4-201ENST00000307961 TRIM27P14373 513 aa13.68□□□□□ -0.22
RPL4-201ENST00000307961 ITPRIPQ8IWB1 547 aa13.68□□□□□ -0.22
RPL4-201ENST00000307961 DDX11L8A8MPP1 907 aa13.68□□□□□ -0.22
RPL4-201ENST00000307961 HDAC1Q13547 482 aaPredicted RBP13.68□□□□□ -0.22
RPL4-201ENST00000307961 EXOSC9Q06265 439 aaKnown RBP13.67□□□□□ -0.22
RPL4-201ENST00000307961 MYOM2P54296 1465 aa13.67□□□□□ -0.22
RPL4-201ENST00000307961 ZNF518AQ6AHZ1 1483 aa13.67□□□□□ -0.22
RPL4-201ENST00000307961 SSH1Q8WYL5 1049 aa13.66□□□□□ -0.22
RPL4-201ENST00000307961 DDX19BQ9UMR2 479 aa13.66□□□□□ -0.22
RPL4-201ENST00000307961 TET3O43151 1660 aa13.66□□□□□ -0.22
RPL4-201ENST00000307961 CHGAP10645 457 aaKnown RBP13.66□□□□□ -0.22
RPL4-201ENST00000307961 SMC5Q8IY18 1101 aa13.66□□□□□ -0.22
RPL4-201ENST00000307961 ZFYVE16Q7Z3T8 1539 aa13.65□□□□□ -0.22
RPL4-201ENST00000307961 ATF7IPQ6VMQ6 1270 aa13.65□□□□□ -0.22
RPL4-201ENST00000307961 CT47B1P0C2W7 299 aaPredicted RBP13.65□□□□□ -0.22
RPL4-201ENST00000307961 TMEM132EQ6IEE7 984 aa13.65□□□□□ -0.22
RPL4-201ENST00000307961 SHROOM2Q13796 1616 aa13.64□□□□□ -0.23
RPL4-201ENST00000307961 ERCC6L2Q5T890 1561 aa13.64□□□□□ -0.23
RPL4-201ENST00000307961 DDIT3P35638 169 aa13.64□□□□□ -0.23
RPL4-201ENST00000307961 TNPO1Q92973 898 aaKnown RBP13.64□□□□□ -0.23
RPL4-201ENST00000307961 NOB1Q9ULX3 412 aaKnown RBP13.64□□□□□ -0.23
RPL4-201ENST00000307961 ESPNB1AK53 854 aa13.64□□□□□ -0.23
RPL4-201ENST00000307961 DEPDC5O75140 1603 aa13.63□□□□□ -0.23
RPL4-201ENST00000307961 RBM25P49756 843 aaKnown RBP13.63□□□□□ -0.23
RPL4-201ENST00000307961 NCBP3Q53F19 620 aaKnown RBP13.63□□□□□ -0.23
RPL4-201ENST00000307961 TMEM57Q8N5G2 664 aa13.63□□□□□ -0.23
RPL4-201ENST00000307961 NOS1P29475 1434 aa13.63□□□□□ -0.23
RPL4-201ENST00000307961 HSP90AA1P07900 732 aaKnown RBP13.63□□□□□ -0.23
RPL4-201ENST00000307961 LNPKQ9C0E8 428 aa13.63□□□□□ -0.23
RPL4-201ENST00000307961 ERBB4Q15303 1308 aa13.63□□□□□ -0.23
RPL4-201ENST00000307961 GAS2L3Q86XJ1 694 aa13.62□□□□□ -0.23
RPL4-201ENST00000307961 ISY1Q9ULR0 285 aaKnown RBP13.62□□□□□ -0.23
RPL4-201ENST00000307961 NEURL4Q96JN8 1562 aa13.62□□□□□ -0.23
RPL4-201ENST00000307961 NCOA3Q9Y6Q9 1424 aa13.62□□□□□ -0.23
RPL4-201ENST00000307961 U2SURPO15042 1029 aaKnown RBP13.62□□□□□ -0.23
RPL4-201ENST00000307961 SNX21Q969T3 373 aa13.62□□□□□ -0.23
RPL4-201ENST00000307961 ZBTB40Q9NUA8 1239 aa13.62□□□□□ -0.23
RPL4-201ENST00000307961 HSP90AB1P08238 724 aaKnown RBP13.61□□□□□ -0.23
RPL4-201ENST00000307961 HSP90AA2PQ14568 343 aaPredicted RBP13.61□□□□□ -0.23
RPL4-201ENST00000307961 VWDEQ8N2E2 1590 aa13.61□□□□□ -0.23
RPL4-201ENST00000307961 MYO3AQ8NEV4 1616 aa13.61□□□□□ -0.23
RPL4-201ENST00000307961 TMPOP42166 694 aaKnown RBP13.61□□□□□ -0.23
RPL4-201ENST00000307961 GLIPR1L2Q4G1C9 344 aa13.61□□□□□ -0.23
RPL4-201ENST00000307961 TRIM44Q96DX7 344 aaPredicted RBP13.61□□□□□ -0.23
RPL4-201ENST00000307961 TRIM35Q9UPQ4 493 aa13.61□□□□□ -0.23
RPL4-201ENST00000307961 C14orf93Q9H972 538 aaKnown RBP13.6□□□□□ -0.23
RPL4-201ENST00000307961 NUCB1Q02818 461 aa13.6□□□□□ -0.23
RPL4-201ENST00000307961 GBP4Q96PP9 640 aa13.6□□□□□ -0.23
RPL4-201ENST00000307961 NRXN1Q9ULB1 1477 aa13.6□□□□□ -0.23
RPL4-201ENST00000307961 FOXD4L1Q9NU39 408 aa13.6□□□□□ -0.23
RPL4-201ENST00000307961 PLEKHF1Q96S99 279 aa13.59□□□□□ -0.23
RPL4-201ENST00000307961 CIZ1Q9ULV3 898 aaPredicted RBP13.59□□□□□ -0.23
RPL4-201ENST00000307961 CD109Q6YHK3 1445 aa13.59□□□□□ -0.23
RPL4-201ENST00000307961 RAB3GAP1Q15042 981 aa13.59□□□□□ -0.23
RPL4-201ENST00000307961 KIF1BO60333 1816 aa13.58□□□□□ -0.23
RPL4-201ENST00000307961 CHD1LQ86WJ1 897 aa13.58□□□□□ -0.24
RPL4-201ENST00000307961 RRP9O43818 475 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms