RNA–Protein interactions for RNA: ENST00000307289.10

SYVN1-202, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-202ENST00000307289 TRMT2AQ8IZ69 625 aaKnown RBP21.55■■□□□ 1.04
SYVN1-202ENST00000307289 ZC3H13Q5T200 1668 aaKnown RBP21.54■■□□□ 1.04
SYVN1-202ENST00000307289 TULP4Q9NRJ4 1543 aa21.53■■□□□ 1.04
SYVN1-202ENST00000307289 PIK3C2BO00750 1634 aa21.53■■□□□ 1.04
SYVN1-202ENST00000307289 MLECQ14165 292 aa21.53■■□□□ 1.04
SYVN1-202ENST00000307289 MINK1Q8N4C8 1332 aaPredicted RBP21.53■■□□□ 1.04
SYVN1-202ENST00000307289 MYO5BQ9ULV0 1848 aa21.52■■□□□ 1.04
SYVN1-202ENST00000307289 EVC2Q86UK5 1308 aa21.52■■□□□ 1.03
SYVN1-202ENST00000307289 SRPK2P78362 688 aaKnown RBP21.51■■□□□ 1.03
SYVN1-202ENST00000307289 WWC1Q8IX03 1113 aa21.51■■□□□ 1.03
SYVN1-202ENST00000307289 POLR3AO14802 1390 aaPredicted RBP21.51■■□□□ 1.03
SYVN1-202ENST00000307289 PDE4AP27815 886 aa21.51■■□□□ 1.03
SYVN1-202ENST00000307289 PRAM1Q96QH2 718 aa21.5■■□□□ 1.03
SYVN1-202ENST00000307289 GGNBP2Q9H3C7 697 aa21.49■■□□□ 1.03
SYVN1-202ENST00000307289 SLC52A1Q9NWF4 448 aa21.49■■□□□ 1.03
SYVN1-202ENST00000307289 CGNL1Q0VF96 1302 aa21.48■■□□□ 1.03
SYVN1-202ENST00000307289 ARHGEF28Q8N1W1 1705 aaKnown RBP21.48■■□□□ 1.03
SYVN1-202ENST00000307289 TCP11L2Q8N4U5 519 aa21.48■■□□□ 1.03
SYVN1-202ENST00000307289 TSPOAP1O95153 1857 aa21.48■■□□□ 1.03
SYVN1-202ENST00000307289 ARHGAP31Q2M1Z3 1444 aa21.48■■□□□ 1.03
SYVN1-202ENST00000307289 TCERG1O14776 1098 aaKnown RBP21.47■■□□□ 1.03
SYVN1-202ENST00000307289 NOP58Q9Y2X3 529 aaKnown RBP21.47■■□□□ 1.03
SYVN1-202ENST00000307289 E9PSI1 815 aa21.46■■□□□ 1.03
SYVN1-202ENST00000307289 NKTRP30414 1462 aaKnown RBP21.45■■□□□ 1.02
SYVN1-202ENST00000307289 STAG3Q9UJ98 1225 aa21.45■■□□□ 1.02
SYVN1-202ENST00000307289 SHPRHQ149N8 1683 aa21.45■■□□□ 1.02
SYVN1-202ENST00000307289 A0A1W2PP64 1363 aa21.44■■□□□ 1.02
SYVN1-202ENST00000307289 ANP32AP39687 249 aaKnown RBP21.44■■□□□ 1.02
SYVN1-202ENST00000307289 KDM2BQ8NHM5 1336 aa21.44■■□□□ 1.02
SYVN1-202ENST00000307289 FBLN1P23142 703 aa21.44■■□□□ 1.02
SYVN1-202ENST00000307289 BACH2Q9BYV9 841 aa21.44■■□□□ 1.02
SYVN1-202ENST00000307289 POGKQ9P215 609 aa21.44■■□□□ 1.02
SYVN1-202ENST00000307289 ANKRD36BQ8N2N9 1353 aa21.43■■□□□ 1.02
SYVN1-202ENST00000307289 IPO9Q96P70 1041 aaKnown RBP21.43■■□□□ 1.02
SYVN1-202ENST00000307289 BCL2L13Q9BXK5 485 aa21.42■■□□□ 1.02
SYVN1-202ENST00000307289 U2AF1L5P0DN76 240 aaPredicted RBP21.42■■□□□ 1.02
SYVN1-202ENST00000307289 U2AF1Q01081 240 aaKnown RBP eCLIP21.42■■□□□ 1.02
SYVN1-202ENST00000307289 RUNDC1Q96C34 613 aa21.42■■□□□ 1.02
SYVN1-202ENST00000307289 TNNQ9UQP3 1299 aa21.42■■□□□ 1.02
SYVN1-202ENST00000307289 TMEM131LA2VDJ0 1609 aa21.42■■□□□ 1.02
SYVN1-202ENST00000307289 PREX1Q8TCU6 1659 aa21.42■■□□□ 1.02
SYVN1-202ENST00000307289 WAPLQ7Z5K2 1190 aa21.42■■□□□ 1.02
SYVN1-202ENST00000307289 PANK1Q8TE04 598 aa21.42■■□□□ 1.02
SYVN1-202ENST00000307289 NBR1Q14596 966 aa21.41■■□□□ 1.02
SYVN1-202ENST00000307289 FRAT1Q92837 279 aaPredicted RBP21.4■■□□□ 1.02
SYVN1-202ENST00000307289 PTPRMP28827 1452 aa21.39■■□□□ 1.01
SYVN1-202ENST00000307289 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.38■■□□□ 1.01
SYVN1-202ENST00000307289 YTHDC2Q9H6S0 1430 aaKnown RBP21.38■■□□□ 1.01
SYVN1-202ENST00000307289 RIMBP3CA6NJZ7 1639 aa21.38■■□□□ 1.01
SYVN1-202ENST00000307289 RIMBP3BA6NNM3 1639 aa21.38■■□□□ 1.01
SYVN1-202ENST00000307289 RIMBP3Q9UFD9 1639 aa21.38■■□□□ 1.01
SYVN1-202ENST00000307289 U2SURPO15042 1029 aaKnown RBP21.37■■□□□ 1.01
SYVN1-202ENST00000307289 FYB1O15117 783 aa21.37■■□□□ 1.01
SYVN1-202ENST00000307289 CDK19Q9BWU1 502 aa21.37■■□□□ 1.01
SYVN1-202ENST00000307289 CABP1Q9NZU7 370 aa21.37■■□□□ 1.01
SYVN1-202ENST00000307289 COG6Q9Y2V7 657 aa21.37■■□□□ 1.01
SYVN1-202ENST00000307289 RGS3P49796 1198 aa21.37■■□□□ 1.01
SYVN1-202ENST00000307289 ZFYVE9O95405 1425 aa21.36■■□□□ 1.01
SYVN1-202ENST00000307289 IGHDP01880 384 aa21.36■■□□□ 1.01
SYVN1-202ENST00000307289 CFAP53Q96M91 514 aa21.36■■□□□ 1.01
SYVN1-202ENST00000307289 DIP2BQ9P265 1576 aa21.34■■□□□ 1.01
SYVN1-202ENST00000307289 MS4A1P11836 297 aa21.34■■□□□ 1.01
SYVN1-202ENST00000307289 ZBTB47Q9UFB7 747 aaPredicted RBP21.34■■□□□ 1.01
SYVN1-202ENST00000307289 CENPQQ7L2Z9 268 aaPredicted RBP21.33■■□□□ 1.01
SYVN1-202ENST00000307289 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.33■■□□□ 1.01
SYVN1-202ENST00000307289 IQSEC2Q5JU85 1478 aa21.33■■□□□ 1.01
SYVN1-202ENST00000307289 CANXP27824 592 aaKnown RBP21.33■■□□□ 1.01
SYVN1-202ENST00000307289 PHF23Q9BUL5 403 aaPredicted RBP21.33■■□□□ 1.01
SYVN1-202ENST00000307289 CD163L1Q9NR16 1453 aa21.33■■□□□ 1
SYVN1-202ENST00000307289 TSR2Q969E8 191 aaKnown RBP21.33■■□□□ 1
SYVN1-202ENST00000307289 ABCC11Q96J66 1382 aa21.32■■□□□ 1
SYVN1-202ENST00000307289 RLBP1P12271 317 aa21.32■■□□□ 1
SYVN1-202ENST00000307289 PUS7Q96PZ0 661 aaKnown RBP21.32■■□□□ 1
SYVN1-202ENST00000307289 ALKQ9UM73 1620 aa21.31■■□□□ 1
SYVN1-202ENST00000307289 RARSP54136 660 aaKnown RBP21.31■■□□□ 1
SYVN1-202ENST00000307289 CLUAP1Q96AJ1 413 aa21.31■■□□□ 1
SYVN1-202ENST00000307289 NCKAP5LQ9HCH0 1330 aa21.3■■□□□ 1
SYVN1-202ENST00000307289 USP32Q8NFA0 1604 aa21.3■■□□□ 1
SYVN1-202ENST00000307289 PPM1GO15355 546 aaPredicted RBP21.29■■□□□ 1
SYVN1-202ENST00000307289 CLTCQ00610 1675 aaKnown RBP21.28■■□□□ 1
SYVN1-202ENST00000307289 TERF2IPQ9NYB0 399 aa21.28■■□□□ 1
SYVN1-202ENST00000307289 NGEFQ8N5V2 710 aa21.26■□□□□ 0.99
SYVN1-202ENST00000307289 PLEKHF1Q96S99 279 aa21.26■□□□□ 0.99
SYVN1-202ENST00000307289 A2ML1A8K2U0 1454 aa21.26■□□□□ 0.99
SYVN1-202ENST00000307289 WDR63Q8IWG1 891 aa21.25■□□□□ 0.99
SYVN1-202ENST00000307289 ZRANB1Q9UGI0 708 aa21.25■□□□□ 0.99
SYVN1-202ENST00000307289 NSD2O96028 1365 aa21.25■□□□□ 0.99
SYVN1-202ENST00000307289 NLRP1Q9C000 1473 aa21.25■□□□□ 0.99
SYVN1-202ENST00000307289 TXNDC2Q86VQ3 553 aa21.25■□□□□ 0.99
SYVN1-202ENST00000307289 ATAD2Q6PL18 1390 aa21.25■□□□□ 0.99
SYVN1-202ENST00000307289 ARHGEF40Q8TER5 1519 aa21.24■□□□□ 0.99
SYVN1-202ENST00000307289 SLC4A3P48751 1232 aa21.24■□□□□ 0.99
SYVN1-202ENST00000307289 C8orf34Q49A92 452 aa21.24■□□□□ 0.99
SYVN1-202ENST00000307289 TRIM35Q9UPQ4 493 aa21.24■□□□□ 0.99
SYVN1-202ENST00000307289 RIMS2Q9UQ26 1411 aa21.23■□□□□ 0.99
SYVN1-202ENST00000307289 LAS1LQ9Y4W2 734 aaKnown RBP21.23■□□□□ 0.99
SYVN1-202ENST00000307289 TMPOP42166 694 aaKnown RBP21.23■□□□□ 0.99
SYVN1-202ENST00000307289 PDE3AQ14432 1141 aa21.23■□□□□ 0.99
SYVN1-202ENST00000307289 METP08581 1390 aa21.22■□□□□ 0.99
SYVN1-202ENST00000307289 HDGFL2Q7Z4V5 671 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms