RNA–Protein interactions for RNA: ENST00000304523.9

LDB2-201, Transcript of LIM domain binding 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB2, Length 2,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-201ENST00000304523 RRAGDQ9NQL2 400 aaPredicted RBP12.06□□□□□ -0.48
LDB2-201ENST00000304523 USP32Q8NFA0 1604 aa12.06□□□□□ -0.48
LDB2-201ENST00000304523 PDZRN3Q9UPQ7 1066 aa12.05□□□□□ -0.48
LDB2-201ENST00000304523 KIF1BO60333 1816 aa12.04□□□□□ -0.48
LDB2-201ENST00000304523 RLBP1P12271 317 aa12.04□□□□□ -0.48
LDB2-201ENST00000304523 WDR63Q8IWG1 891 aa12.04□□□□□ -0.48
LDB2-201ENST00000304523 ZC3H13Q5T200 1668 aaKnown RBP12.04□□□□□ -0.48
LDB2-201ENST00000304523 NRXN1Q9ULB1 1477 aa12.04□□□□□ -0.48
LDB2-201ENST00000304523 NCBP3Q53F19 620 aaKnown RBP12.04□□□□□ -0.48
LDB2-201ENST00000304523 CCDC27Q2M243 656 aa12.03□□□□□ -0.48
LDB2-201ENST00000304523 EFCAB2Q5VUJ9 269 aa12.03□□□□□ -0.48
LDB2-201ENST00000304523 RUNDC1Q96C34 613 aa12.03□□□□□ -0.48
LDB2-201ENST00000304523 ARAP3Q8WWN8 1544 aa12.03□□□□□ -0.48
LDB2-201ENST00000304523 RWDD1Q9H446 243 aaPredicted RBP12.03□□□□□ -0.48
LDB2-201ENST00000304523 MCM4P33991 863 aa12.02□□□□□ -0.48
LDB2-201ENST00000304523 SETBP1Q9Y6X0 1596 aa12.02□□□□□ -0.48
LDB2-201ENST00000304523 CHD1O14646 1710 aa12.02□□□□□ -0.48
LDB2-201ENST00000304523 XRCC6P12956 609 aaKnown RBP eCLIP12.02□□□□□ -0.49
LDB2-201ENST00000304523 ZCCHC11Q5TAX3 1644 aaKnown RBP12.02□□□□□ -0.49
LDB2-201ENST00000304523 ADGRB2O60241 1585 aa12.01□□□□□ -0.49
LDB2-201ENST00000304523 INO80Q9ULG1 1556 aaPredicted RBP12.01□□□□□ -0.49
LDB2-201ENST00000304523 GOLGA6L3A6NEY3 463 aa12.01□□□□□ -0.49
LDB2-201ENST00000304523 TCP11L2Q8N4U5 519 aa12.01□□□□□ -0.49
LDB2-201ENST00000304523 ZNF518AQ6AHZ1 1483 aa12.01□□□□□ -0.49
LDB2-201ENST00000304523 ADGRL1O94910 1474 aa12□□□□□ -0.49
LDB2-201ENST00000304523 CFAP70Q5T0N1 1121 aa12□□□□□ -0.49
LDB2-201ENST00000304523 TNNQ9UQP3 1299 aa12□□□□□ -0.49
LDB2-201ENST00000304523 SPAG9O60271 1321 aaKnown RBP12□□□□□ -0.49
LDB2-201ENST00000304523 MROH1Q8NDA8 1641 aa12□□□□□ -0.49
LDB2-201ENST00000304523 MROH2AA6NES4 1674 aa12□□□□□ -0.49
LDB2-201ENST00000304523 NSD3Q9BZ95 1437 aa12□□□□□ -0.49
LDB2-201ENST00000304523 MVPQ14764 893 aaKnown RBP11.99□□□□□ -0.49
LDB2-201ENST00000304523 CHMP5Q9NZZ3 219 aa11.99□□□□□ -0.49
LDB2-201ENST00000304523 NCOA3Q9Y6Q9 1424 aa11.99□□□□□ -0.49
LDB2-201ENST00000304523 UGGT1Q9NYU2 1555 aa11.99□□□□□ -0.49
LDB2-201ENST00000304523 QRICH2Q9H0J4 1663 aa11.98□□□□□ -0.49
LDB2-201ENST00000304523 CLCN1P35523 988 aa11.98□□□□□ -0.49
LDB2-201ENST00000304523 ADGRF5Q8IZF2 1346 aa11.98□□□□□ -0.49
LDB2-201ENST00000304523 RRP7AQ9Y3A4 280 aaKnown RBP11.98□□□□□ -0.49
LDB2-201ENST00000304523 ATP7AQ04656 1500 aa11.98□□□□□ -0.49
LDB2-201ENST00000304523 ERCC6L2Q5T890 1561 aa11.98□□□□□ -0.49
LDB2-201ENST00000304523 EFCAB6Q5THR3 1501 aa11.97□□□□□ -0.49
LDB2-201ENST00000304523 CT47B1P0C2W7 299 aaPredicted RBP11.97□□□□□ -0.49
LDB2-201ENST00000304523 MORC1Q86VD1 984 aa11.97□□□□□ -0.49
LDB2-201ENST00000304523 C22orf23Q9BZE7 217 aa11.97□□□□□ -0.49
LDB2-201ENST00000304523 MYH16Q9H6N6 1097 aa11.97□□□□□ -0.49
LDB2-201ENST00000304523 UHRF1BP1LA0JNW5 1464 aa11.97□□□□□ -0.49
LDB2-201ENST00000304523 NEUROD2Q15784 382 aa11.97□□□□□ -0.49
LDB2-201ENST00000304523 ISY1Q9ULR0 285 aaKnown RBP11.97□□□□□ -0.49
LDB2-201ENST00000304523 HDAC1Q13547 482 aaPredicted RBP11.96□□□□□ -0.49
LDB2-201ENST00000304523 BCL2L13Q9BXK5 485 aa11.96□□□□□ -0.49
LDB2-201ENST00000304523 TRAK2O60296 914 aa11.96□□□□□ -0.5
LDB2-201ENST00000304523 MRE11P49959 708 aa11.96□□□□□ -0.5
LDB2-201ENST00000304523 ZKSCAN2Q63HK3 967 aa11.96□□□□□ -0.5
LDB2-201ENST00000304523 ZNF692Q9BU19 519 aaPredicted RBP11.96□□□□□ -0.5
LDB2-201ENST00000304523 DDIT3P35638 169 aa11.95□□□□□ -0.5
LDB2-201ENST00000304523 PANK2Q9BZ23 570 aa11.95□□□□□ -0.5
LDB2-201ENST00000304523 ADGRB3O60242 1522 aa11.95□□□□□ -0.5
LDB2-201ENST00000304523 PPLO60437 1756 aa11.94□□□□□ -0.5
LDB2-201ENST00000304523 DDX11L8A8MPP1 907 aa11.94□□□□□ -0.5
LDB2-201ENST00000304523 DZIP1LQ8IYY4 767 aaKnown RBP11.94□□□□□ -0.5
LDB2-201ENST00000304523 AFAP1Q8N556 730 aa11.94□□□□□ -0.5
LDB2-201ENST00000304523 ADGRB1O14514 1584 aa11.94□□□□□ -0.5
LDB2-201ENST00000304523 PPRC1Q5VV67 1664 aaKnown RBP11.94□□□□□ -0.5
LDB2-201ENST00000304523 FANCAO15360 1455 aa11.93□□□□□ -0.5
LDB2-201ENST00000304523 ABCA9Q8IUA7 1624 aa11.93□□□□□ -0.5
LDB2-201ENST00000304523 PNNQ9H307 717 aaKnown RBP11.93□□□□□ -0.5
LDB2-201ENST00000304523 NSD2O96028 1365 aa11.93□□□□□ -0.5
LDB2-201ENST00000304523 MTHFSP49914 203 aa11.93□□□□□ -0.5
LDB2-201ENST00000304523 SMC5Q8IY18 1101 aa11.93□□□□□ -0.5
LDB2-201ENST00000304523 CFAP53Q96M91 514 aa11.93□□□□□ -0.5
LDB2-201ENST00000304523 LMTK2Q8IWU2 1503 aa11.93□□□□□ -0.5
LDB2-201ENST00000304523 MFAP1P55081 439 aaKnown RBP11.92□□□□□ -0.5
LDB2-201ENST00000304523 FTSJ3Q8IY81 847 aaKnown RBP11.92□□□□□ -0.5
LDB2-201ENST00000304523 SPRYD3Q8NCJ5 442 aa11.92□□□□□ -0.5
LDB2-201ENST00000304523 GZF1Q9H116 711 aaPredicted RBP11.92□□□□□ -0.5
LDB2-201ENST00000304523 RBM25P49756 843 aaKnown RBP11.92□□□□□ -0.5
LDB2-201ENST00000304523 SNX21Q969T3 373 aa11.92□□□□□ -0.5
LDB2-201ENST00000304523 SLC12A5Q9H2X9 1139 aa11.92□□□□□ -0.5
LDB2-201ENST00000304523 HSCBQ8IWL3 235 aa11.91□□□□□ -0.5
LDB2-201ENST00000304523 GRPEL1Q9HAV7 217 aa11.91□□□□□ -0.5
LDB2-201ENST00000304523 DDX19BQ9UMR2 479 aa11.91□□□□□ -0.5
LDB2-201ENST00000304523 NOS1P29475 1434 aa11.91□□□□□ -0.5
LDB2-201ENST00000304523 TNNT2P45379 298 aaPredicted RBP11.91□□□□□ -0.5
LDB2-201ENST00000304523 TRIM27P14373 513 aa11.9□□□□□ -0.5
LDB2-201ENST00000304523 PUS7Q96PZ0 661 aaKnown RBP11.9□□□□□ -0.5
LDB2-201ENST00000304523 KIF3BO15066 747 aa11.9□□□□□ -0.5
LDB2-201ENST00000304523 CIZ1Q9ULV3 898 aaPredicted RBP11.9□□□□□ -0.5
LDB2-201ENST00000304523 ARXQ96QS3 562 aa11.89□□□□□ -0.51
LDB2-201ENST00000304523 ABCC11Q96J66 1382 aa11.89□□□□□ -0.51
LDB2-201ENST00000304523 CD109Q6YHK3 1445 aa11.89□□□□□ -0.51
LDB2-201ENST00000304523 ATF7IPQ6VMQ6 1270 aa11.89□□□□□ -0.51
LDB2-201ENST00000304523 ANKRD36BQ8N2N9 1353 aa11.88□□□□□ -0.51
LDB2-201ENST00000304523 CFAP74Q9C0B2 1584 aa11.88□□□□□ -0.51
LDB2-201ENST00000304523 C14orf93Q9H972 538 aaKnown RBP11.88□□□□□ -0.51
LDB2-201ENST00000304523 SMC4Q9NTJ3 1288 aa11.88□□□□□ -0.51
LDB2-201ENST00000304523 ARHGEF28Q8N1W1 1705 aaKnown RBP11.88□□□□□ -0.51
LDB2-201ENST00000304523 NAP1L5Q96NT1 182 aaPredicted RBP11.88□□□□□ -0.51
LDB2-201ENST00000304523 ZBTB40Q9NUA8 1239 aa11.88□□□□□ -0.51
LDB2-201ENST00000304523 IL16Q14005 1332 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms