RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 GRIN2BQ13224 1484 aa25.56■■□□□ 1.68
LETM1-201ENST00000302787 PRXQ9BXM0 1461 aa25.56■■□□□ 1.68
LETM1-201ENST00000302787 EXOSC9Q06265 439 aaKnown RBP25.55■■□□□ 1.68
LETM1-201ENST00000302787 APPP05067 770 aa25.55■■□□□ 1.68
LETM1-201ENST00000302787 PDE3AQ14432 1141 aa25.55■■□□□ 1.68
LETM1-201ENST00000302787 VPS53Q5VIR6 699 aa25.55■■□□□ 1.68
LETM1-201ENST00000302787 PNISRQ8TF01 805 aaKnown RBP25.55■■□□□ 1.68
LETM1-201ENST00000302787 UBTFL1P0CB47 393 aaPredicted RBP25.54■■□□□ 1.68
LETM1-201ENST00000302787 FAM43AQ8N2R8 423 aa25.54■■□□□ 1.68
LETM1-201ENST00000302787 AFAP1Q8N556 730 aa25.54■■□□□ 1.68
LETM1-201ENST00000302787 TIAM1Q13009 1591 aa25.53■■□□□ 1.68
LETM1-201ENST00000302787 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.53■■□□□ 1.68
LETM1-201ENST00000302787 OSCARQ8IYS5 282 aa25.53■■□□□ 1.68
LETM1-201ENST00000302787 MRE11P49959 708 aa25.53■■□□□ 1.68
LETM1-201ENST00000302787 SCAPERQ9BY12 1400 aa25.53■■□□□ 1.68
LETM1-201ENST00000302787 TRDNQ13061 729 aa25.52■■□□□ 1.68
LETM1-201ENST00000302787 C9orf84Q5VXU9 1444 aa25.52■■□□□ 1.68
LETM1-201ENST00000302787 SMG6Q86US8 1419 aaKnown RBP25.51■■□□□ 1.67
LETM1-201ENST00000302787 TPM2P07951 284 aa25.51■■□□□ 1.67
LETM1-201ENST00000302787 SYNJ2O15056 1496 aa25.51■■□□□ 1.67
LETM1-201ENST00000302787 BCAR3O75815 825 aa25.51■■□□□ 1.67
LETM1-201ENST00000302787 SASS6Q6UVJ0 657 aa25.51■■□□□ 1.67
LETM1-201ENST00000302787 PDE4CQ08493 712 aa25.51■■□□□ 1.67
LETM1-201ENST00000302787 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.5■■□□□ 1.67
LETM1-201ENST00000302787 PRKAR2BP31323 418 aa25.5■■□□□ 1.67
LETM1-201ENST00000302787 WDR97A6NE52 1622 aa25.49■■□□□ 1.67
LETM1-201ENST00000302787 TRAK2O60296 914 aa25.49■■□□□ 1.67
LETM1-201ENST00000302787 TOP2BQ02880 1626 aa25.49■■□□□ 1.67
LETM1-201ENST00000302787 FAM13BQ9NYF5 915 aa25.48■■□□□ 1.67
LETM1-201ENST00000302787 RIC3Q7Z5B4 369 aa25.48■■□□□ 1.67
LETM1-201ENST00000302787 NINLQ9Y2I6 1382 aa25.48■■□□□ 1.67
LETM1-201ENST00000302787 VSIG10Q8N0Z9 540 aa25.47■■□□□ 1.67
LETM1-201ENST00000302787 CEP89Q96ST8 783 aa25.47■■□□□ 1.67
LETM1-201ENST00000302787 NASPP49321 788 aaPredicted RBP25.47■■□□□ 1.67
LETM1-201ENST00000302787 BACH2Q9BYV9 841 aa25.47■■□□□ 1.67
LETM1-201ENST00000302787 NOB1Q9ULX3 412 aaKnown RBP25.47■■□□□ 1.67
LETM1-201ENST00000302787 FOSBP53539 338 aa25.46■■□□□ 1.67
LETM1-201ENST00000302787 AIMP1Q12904 312 aaKnown RBP25.46■■□□□ 1.67
LETM1-201ENST00000302787 CCDC184Q52MB2 194 aa25.46■■□□□ 1.67
LETM1-201ENST00000302787 NFXL1Q6ZNB6 911 aa25.46■■□□□ 1.67
LETM1-201ENST00000302787 CCDC73Q6ZRK6 1079 aa25.46■■□□□ 1.67
LETM1-201ENST00000302787 HOOK1Q9UJC3 728 aaKnown RBP25.46■■□□□ 1.67
LETM1-201ENST00000302787 GNAI3P08754 354 aa25.46■■□□□ 1.67
LETM1-201ENST00000302787 TSR2Q969E8 191 aaKnown RBP25.46■■□□□ 1.67
LETM1-201ENST00000302787 TWISTNBQ3B726 338 aaPredicted RBP25.45■■□□□ 1.66
LETM1-201ENST00000302787 GCC1Q96CN9 775 aa25.45■■□□□ 1.66
LETM1-201ENST00000302787 CNTROBQ8N137 903 aa25.45■■□□□ 1.66
LETM1-201ENST00000302787 RAPGEF4Q8WZA2 1011 aa25.45■■□□□ 1.66
LETM1-201ENST00000302787 C1orf115Q9H7X2 142 aa25.45■■□□□ 1.66
LETM1-201ENST00000302787 NUTM2GQ5VZR2 741 aa25.44■■□□□ 1.66
LETM1-201ENST00000302787 AMOTL1Q8IY63 956 aa25.44■■□□□ 1.66
LETM1-201ENST00000302787 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.44■■□□□ 1.66
LETM1-201ENST00000302787 HOMER1Q86YM7 354 aa25.44■■□□□ 1.66
LETM1-201ENST00000302787 ERBINQ96RT1 1412 aa25.43■■□□□ 1.66
LETM1-201ENST00000302787 FAM69CQ0P6D2 419 aa25.43■■□□□ 1.66
LETM1-201ENST00000302787 CCDC30Q5VVM6 783 aa25.43■■□□□ 1.66
LETM1-201ENST00000302787 GPS2Q13227 327 aa25.43■■□□□ 1.66
LETM1-201ENST00000302787 FBXW7Q969H0 707 aa25.43■■□□□ 1.66
LETM1-201ENST00000302787 NEUROD6Q96NK8 337 aa25.43■■□□□ 1.66
LETM1-201ENST00000302787 SLC12A5Q9H2X9 1139 aa25.43■■□□□ 1.66
LETM1-201ENST00000302787 NOL10Q9BSC4 688 aaKnown RBP25.43■■□□□ 1.66
LETM1-201ENST00000302787 NLRP6P59044 892 aa25.43■■□□□ 1.66
LETM1-201ENST00000302787 ANKRD20A12PQ8NF67 263 aa25.42■■□□□ 1.66
LETM1-201ENST00000302787 DAPK1P53355 1430 aa25.42■■□□□ 1.66
LETM1-201ENST00000302787 HECW1Q76N89 1606 aa25.42■■□□□ 1.66
LETM1-201ENST00000302787 PRG4Q92954 1404 aaPredicted RBP25.42■■□□□ 1.66
LETM1-201ENST00000302787 CCDC70Q6NSX1 233 aa25.41■■□□□ 1.66
LETM1-201ENST00000302787 RABEP1Q15276 862 aa25.41■■□□□ 1.66
LETM1-201ENST00000302787 GAS2L2Q8NHY3 880 aa25.41■■□□□ 1.66
LETM1-201ENST00000302787 CCDC39Q9UFE4 941 aa25.41■■□□□ 1.66
LETM1-201ENST00000302787 SURF6O75683 361 aaKnown RBP25.41■■□□□ 1.66
LETM1-201ENST00000302787 PSMA5P28066 241 aa25.41■■□□□ 1.66
LETM1-201ENST00000302787 PCMTD1Q96MG8 357 aaPredicted RBP25.4■■□□□ 1.66
LETM1-201ENST00000302787 PRAM1Q96QH2 718 aa25.4■■□□□ 1.66
LETM1-201ENST00000302787 ERICH2A1L162 156 aa25.4■■□□□ 1.66
LETM1-201ENST00000302787 NEK4P51957 841 aa25.4■■□□□ 1.66
LETM1-201ENST00000302787 CAVIN1Q6NZI2 390 aaKnown RBP25.4■■□□□ 1.66
LETM1-201ENST00000302787 CCDC47Q96A33 483 aaKnown RBP25.4■■□□□ 1.66
LETM1-201ENST00000302787 TROQ12816 1431 aaPredicted RBP25.39■■□□□ 1.66
LETM1-201ENST00000302787 CLASRPQ8N2M8 674 aaKnown RBP25.39■■□□□ 1.66
LETM1-201ENST00000302787 IFT57Q9NWB7 429 aa25.39■■□□□ 1.66
LETM1-201ENST00000302787 WDR63Q8IWG1 891 aa25.39■■□□□ 1.66
LETM1-201ENST00000302787 RNF214Q8ND24 703 aa25.39■■□□□ 1.66
LETM1-201ENST00000302787 IPO7O95373 1038 aaKnown RBP25.39■■□□□ 1.65
LETM1-201ENST00000302787 VPS37DQ86XT2 251 aa25.39■■□□□ 1.65
LETM1-201ENST00000302787 ZNF771Q7L3S4 317 aaPredicted RBP25.38■■□□□ 1.65
LETM1-201ENST00000302787 RALYLQ86SE5 291 aaKnown RBP25.38■■□□□ 1.65
LETM1-201ENST00000302787 FSD1Q9BTV5 496 aa25.38■■□□□ 1.65
LETM1-201ENST00000302787 SYTL4Q96C24 671 aaPredicted RBP25.38■■□□□ 1.65
LETM1-201ENST00000302787 SUPT6HQ7KZ85 1726 aaKnown RBP25.37■■□□□ 1.65
LETM1-201ENST00000302787 WASHC4Q2M389 1173 aa25.37■■□□□ 1.65
LETM1-201ENST00000302787 MBD3O95983 291 aa25.36■■□□□ 1.65
LETM1-201ENST00000302787 MCM2P49736 904 aa25.36■■□□□ 1.65
LETM1-201ENST00000302787 SAFBQ15424 915 aaKnown RBP eCLIP25.36■■□□□ 1.65
LETM1-201ENST00000302787 NLRP2Q9NX02 1062 aa25.36■■□□□ 1.65
LETM1-201ENST00000302787 PLEKHH2Q8IVE3 1493 aa25.36■■□□□ 1.65
LETM1-201ENST00000302787 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.35■■□□□ 1.65
LETM1-201ENST00000302787 CT47B1P0C2W7 299 aaPredicted RBP25.35■■□□□ 1.65
LETM1-201ENST00000302787 PRPF40AO75400 957 aaKnown RBP25.35■■□□□ 1.65
LETM1-201ENST00000302787 CCDC27Q2M243 656 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms