RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 ARHGAP23Q9P227 1491 aa14.28□□□□□ -0.12
CLP1-201ENST00000302731 ANKRD36BQ8N2N9 1353 aa14.28□□□□□ -0.12
CLP1-201ENST00000302731 PLEKHG1Q9ULL1 1385 aa14.28□□□□□ -0.12
CLP1-201ENST00000302731 PPP2R1AP30153 589 aa14.27□□□□□ -0.12
CLP1-201ENST00000302731 FAM135BQ49AJ0 1406 aa14.27□□□□□ -0.12
CLP1-201ENST00000302731 CEBPAP49715 358 aaPredicted RBP14.26□□□□□ -0.13
CLP1-201ENST00000302731 SLC12A5Q9H2X9 1139 aa14.26□□□□□ -0.13
CLP1-201ENST00000302731 NSD2O96028 1365 aa14.25□□□□□ -0.13
CLP1-201ENST00000302731 NSD3Q9BZ95 1437 aa14.25□□□□□ -0.13
CLP1-201ENST00000302731 CPS1P31327 1500 aa14.25□□□□□ -0.13
CLP1-201ENST00000302731 METP08581 1390 aa14.25□□□□□ -0.13
CLP1-201ENST00000302731 ADAMTS13Q76LX8 1427 aa14.24□□□□□ -0.13
CLP1-201ENST00000302731 THEMISQ8N1K5 641 aaPredicted RBP14.24□□□□□ -0.13
CLP1-201ENST00000302731 EID1Q9Y6B2 187 aa14.24□□□□□ -0.13
CLP1-201ENST00000302731 MED14O60244 1454 aa14.24□□□□□ -0.13
CLP1-201ENST00000302731 CGNL1Q0VF96 1302 aa14.23□□□□□ -0.13
CLP1-201ENST00000302731 BLMP54132 1417 aaPredicted RBP14.23□□□□□ -0.13
CLP1-201ENST00000302731 SRPK2P78362 688 aaKnown RBP14.23□□□□□ -0.13
CLP1-201ENST00000302731 SAFB2Q14151 953 aaKnown RBP eCLIP14.23□□□□□ -0.13
CLP1-201ENST00000302731 CABP2Q9NPB3 220 aa14.23□□□□□ -0.13
CLP1-201ENST00000302731 MINK1Q8N4C8 1332 aaPredicted RBP14.22□□□□□ -0.13
CLP1-201ENST00000302731 ADAMTSL3P82987 1691 aa14.22□□□□□ -0.13
CLP1-201ENST00000302731 LTKP29376 864 aa14.22□□□□□ -0.13
CLP1-201ENST00000302731 TXNDC2Q86VQ3 553 aa14.22□□□□□ -0.13
CLP1-201ENST00000302731 TERF2IPQ9NYB0 399 aa14.21□□□□□ -0.13
CLP1-201ENST00000302731 DIP2AQ14689 1571 aa14.21□□□□□ -0.13
CLP1-201ENST00000302731 CDK19Q9BWU1 502 aa14.2□□□□□ -0.14
CLP1-201ENST00000302731 SENP3Q9H4L4 574 aaPredicted RBP14.2□□□□□ -0.14
CLP1-201ENST00000302731 RIMS1Q86UR5 1692 aaKnown RBP14.2□□□□□ -0.14
CLP1-201ENST00000302731 SMG6Q86US8 1419 aaKnown RBP14.19□□□□□ -0.14
CLP1-201ENST00000302731 PLEKHH1Q9ULM0 1364 aa14.19□□□□□ -0.14
CLP1-201ENST00000302731 CEP170BQ9Y4F5 1589 aaPredicted RBP14.19□□□□□ -0.14
CLP1-201ENST00000302731 A0A1W2PP64 1363 aa14.19□□□□□ -0.14
CLP1-201ENST00000302731 POLR3AO14802 1390 aaPredicted RBP14.19□□□□□ -0.14
CLP1-201ENST00000302731 NEFLP07196 543 aa14.19□□□□□ -0.14
CLP1-201ENST00000302731 WAPLQ7Z5K2 1190 aa14.19□□□□□ -0.14
CLP1-201ENST00000302731 TBX22Q9Y458 520 aa14.19□□□□□ -0.14
CLP1-201ENST00000302731 SUPT16HQ9Y5B9 1047 aaKnown RBP14.19□□□□□ -0.14
CLP1-201ENST00000302731 ATP7BP35670 1465 aa14.18□□□□□ -0.14
CLP1-201ENST00000302731 BCANQ96GW7 911 aa14.18□□□□□ -0.14
CLP1-201ENST00000302731 CD163L1Q9NR16 1453 aa14.17□□□□□ -0.14
CLP1-201ENST00000302731 MORC1Q86VD1 984 aa14.17□□□□□ -0.14
CLP1-201ENST00000302731 ZNF142P52746 1687 aaPredicted RBP14.17□□□□□ -0.14
CLP1-201ENST00000302731 ADGRB2O60241 1585 aa14.16□□□□□ -0.14
CLP1-201ENST00000302731 WASLO00401 505 aaPredicted RBP14.16□□□□□ -0.14
CLP1-201ENST00000302731 PDE3BQ13370 1112 aa14.16□□□□□ -0.14
CLP1-201ENST00000302731 WDR43Q15061 677 aaKnown RBP eCLIP14.16□□□□□ -0.14
CLP1-201ENST00000302731 HDGFL2Q7Z4V5 671 aaPredicted RBP14.16□□□□□ -0.14
CLP1-201ENST00000302731 NUDCQ9Y266 331 aa14.15□□□□□ -0.14
CLP1-201ENST00000302731 PIK3R4Q99570 1358 aa14.14□□□□□ -0.15
CLP1-201ENST00000302731 SETD1BQ9UPS6 1966 aaKnown RBP14.14□□□□□ -0.15
CLP1-201ENST00000302731 PTCH1Q13635 1447 aa14.14□□□□□ -0.15
CLP1-201ENST00000302731 ADAMTS8Q9UP79 889 aa14.14□□□□□ -0.15
CLP1-201ENST00000302731 ANKRD26Q9UPS8 1709 aa14.14□□□□□ -0.15
CLP1-201ENST00000302731 ROBO2Q9HCK4 1378 aa14.14□□□□□ -0.15
CLP1-201ENST00000302731 PTPRUQ92729 1446 aa14.12□□□□□ -0.15
CLP1-201ENST00000302731 CABP1Q9NZU7 370 aa14.12□□□□□ -0.15
CLP1-201ENST00000302731 CPSF1Q10570 1443 aaKnown RBP14.12□□□□□ -0.15
CLP1-201ENST00000302731 FKBP8Q14318 412 aa14.12□□□□□ -0.15
CLP1-201ENST00000302731 ERICH6BQ5W0A0 696 aa14.12□□□□□ -0.15
CLP1-201ENST00000302731 NGEFQ8N5V2 710 aa14.12□□□□□ -0.15
CLP1-201ENST00000302731 PLPPR3Q6T4P5 718 aa14.11□□□□□ -0.15
CLP1-201ENST00000302731 CCDC61Q9Y6R9 512 aa14.11□□□□□ -0.15
CLP1-201ENST00000302731 SLC26A8Q96RN1 970 aa14.1□□□□□ -0.15
CLP1-201ENST00000302731 PPIP5K1Q6PFW1 1433 aa14.1□□□□□ -0.15
CLP1-201ENST00000302731 CDC42BPGQ6DT37 1551 aa14.09□□□□□ -0.15
CLP1-201ENST00000302731 XRN1Q8IZH2 1706 aaKnown RBP14.09□□□□□ -0.15
CLP1-201ENST00000302731 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.09□□□□□ -0.15
CLP1-201ENST00000302731 FYB1O15117 783 aa14.09□□□□□ -0.15
CLP1-201ENST00000302731 NUDT16Q96DE0 195 aaKnown RBP14.09□□□□□ -0.15
CLP1-201ENST00000302731 CFAP53Q96M91 514 aa14.09□□□□□ -0.15
CLP1-201ENST00000302731 EDC4Q6P2E9 1401 aaKnown RBP14.09□□□□□ -0.15
CLP1-201ENST00000302731 AMOTL2Q9Y2J4 779 aa14.08□□□□□ -0.15
CLP1-201ENST00000302731 KIF20BQ96Q89 1820 aa14.08□□□□□ -0.16
CLP1-201ENST00000302731 ANKLE2Q86XL3 938 aa14.08□□□□□ -0.16
CLP1-201ENST00000302731 SHPRHQ149N8 1683 aa14.07□□□□□ -0.16
CLP1-201ENST00000302731 MTHFSP49914 203 aa14.07□□□□□ -0.16
CLP1-201ENST00000302731 ZNF692Q9BU19 519 aaPredicted RBP14.07□□□□□ -0.16
CLP1-201ENST00000302731 RNF123Q5XPI4 1314 aa14.07□□□□□ -0.16
CLP1-201ENST00000302731 MON2Q7Z3U7 1717 aa14.06□□□□□ -0.16
CLP1-201ENST00000302731 TOPAZ1Q8N9V7 1692 aa14.06□□□□□ -0.16
CLP1-201ENST00000302731 AKAP12Q02952 1782 aa14.06□□□□□ -0.16
CLP1-201ENST00000302731 GGNBP2Q9H3C7 697 aa14.05□□□□□ -0.16
CLP1-201ENST00000302731 ZNF521Q96K83 1311 aa14.04□□□□□ -0.16
CLP1-201ENST00000302731 PRR36Q9H6K5 1346 aa14.04□□□□□ -0.16
CLP1-201ENST00000302731 PLEKHG3A1L390 1219 aa14.04□□□□□ -0.16
CLP1-201ENST00000302731 TNNT2P45379 298 aaPredicted RBP14.04□□□□□ -0.16
CLP1-201ENST00000302731 NCBP3Q53F19 620 aaKnown RBP14.04□□□□□ -0.16
CLP1-201ENST00000302731 ITSN1Q15811 1721 aa14.03□□□□□ -0.16
CLP1-201ENST00000302731 PNPLA6Q8IY17 1366 aa14.02□□□□□ -0.17
CLP1-201ENST00000302731 PELP1Q8IZL8 1130 aaKnown RBP14.01□□□□□ -0.17
CLP1-201ENST00000302731 COL3A1P02461 1466 aaPredicted RBP14.01□□□□□ -0.17
CLP1-201ENST00000302731 CHD2O14647 1828 aaKnown RBP14.01□□□□□ -0.17
CLP1-201ENST00000302731 AATKQ6ZMQ8 1374 aa14.01□□□□□ -0.17
CLP1-201ENST00000302731 ANKARQ7Z5J8 1434 aa14.01□□□□□ -0.17
CLP1-201ENST00000302731 SALL2Q9Y467 1007 aaPredicted RBP14.01□□□□□ -0.17
CLP1-201ENST00000302731 RUNDC1Q96C34 613 aa14□□□□□ -0.17
CLP1-201ENST00000302731 NRKQ7Z2Y5 1582 aa13.99□□□□□ -0.17
CLP1-201ENST00000302731 SENP3-EIF4A1A0A087X0R7 540 aa13.99□□□□□ -0.17
CLP1-201ENST00000302731 APAF1O14727 1248 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms