RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 DDX19BQ9UMR2 479 aa15.06■□□□□ 0
PDGFD-201ENST00000302251 C1orf115Q9H7X2 142 aa15.06■□□□□ 0
PDGFD-201ENST00000302251 SPAG9O60271 1321 aaKnown RBP15.06■□□□□ 0
PDGFD-201ENST00000302251 TRPM1Q7Z4N2 1603 aa15.06■□□□□ 0
PDGFD-201ENST00000302251 CHAF1AQ13111 956 aaPredicted RBP15.06■□□□□ 0
PDGFD-201ENST00000302251 CAVIN1Q6NZI2 390 aaKnown RBP15.06■□□□□ 0
PDGFD-201ENST00000302251 TRIM6-TRIM34B2RNG4 842 aa15.05■□□□□ 0
PDGFD-201ENST00000302251 PTMSP20962 102 aa15.05■□□□□ 0
PDGFD-201ENST00000302251 RSPH4AQ5TD94 716 aa15.05■□□□□ -0
PDGFD-201ENST00000302251 BCL11BQ9C0K0 894 aaPredicted RBP15.05■□□□□ -0
PDGFD-201ENST00000302251 UNC13BO14795 1591 aa15.05■□□□□ -0
PDGFD-201ENST00000302251 WASHC2CQ9Y4E1 1318 aa15.04■□□□□ -0
PDGFD-201ENST00000302251 KCNJ4P48050 445 aa15.04■□□□□ -0
PDGFD-201ENST00000302251 C14orf37Q86TY3 774 aa15.04■□□□□ -0
PDGFD-201ENST00000302251 RIPK4P57078 832 aa15.04■□□□□ -0
PDGFD-201ENST00000302251 EXOSC9Q06265 439 aaKnown RBP15.04■□□□□ -0
PDGFD-201ENST00000302251 RALGAPBQ86X10 1494 aa15.04■□□□□ -0
PDGFD-201ENST00000302251 ARHGEF12Q9NZN5 1544 aa15.03■□□□□ -0
PDGFD-201ENST00000302251 GOLGA6L4A6NEF3 574 aa15.03■□□□□ -0
PDGFD-201ENST00000302251 TMEM132EQ6IEE7 984 aa15.03■□□□□ -0
PDGFD-201ENST00000302251 ESF1Q9H501 851 aaKnown RBP15.03■□□□□ -0
PDGFD-201ENST00000302251 C9orf84Q5VXU9 1444 aa15.03■□□□□ -0
PDGFD-201ENST00000302251 XRCC6P12956 609 aaKnown RBP eCLIP15.03■□□□□ -0
PDGFD-201ENST00000302251 SLC12A5Q9H2X9 1139 aa15.03■□□□□ -0
PDGFD-201ENST00000302251 MAST1Q9Y2H9 1570 aa15.03■□□□□ -0
PDGFD-201ENST00000302251 KIAA1211Q6ZU35 1233 aa15.02■□□□□ -0
PDGFD-201ENST00000302251 AFAP1Q8N556 730 aa15.02■□□□□ -0
PDGFD-201ENST00000302251 ST18O60284 1047 aa15.02■□□□□ -0
PDGFD-201ENST00000302251 EIF3AQ14152 1382 aaKnown RBP15.02□□□□□ -0.01
PDGFD-201ENST00000302251 OS9Q13438 667 aaPredicted RBP15.02□□□□□ -0.01
PDGFD-201ENST00000302251 KANK1Q14678 1352 aa15.02□□□□□ -0.01
PDGFD-201ENST00000302251 MCCP23508 829 aa15.01□□□□□ -0.01
PDGFD-201ENST00000302251 WWC1Q8IX03 1113 aa15.01□□□□□ -0.01
PDGFD-201ENST00000302251 GGNBP2Q9H3C7 697 aa15.01□□□□□ -0.01
PDGFD-201ENST00000302251 ZMYND15Q9H091 742 aa15□□□□□ -0.01
PDGFD-201ENST00000302251 RNF123Q5XPI4 1314 aa15□□□□□ -0.01
PDGFD-201ENST00000302251 RRAGDQ9NQL2 400 aaPredicted RBP15□□□□□ -0.01
PDGFD-201ENST00000302251 PRPF40AO75400 957 aaKnown RBP14.99□□□□□ -0.01
PDGFD-201ENST00000302251 RILPL2Q969X0 211 aa14.99□□□□□ -0.01
PDGFD-201ENST00000302251 NAP1L2Q9ULW6 460 aaPredicted RBP14.99□□□□□ -0.01
PDGFD-201ENST00000302251 A0A0U1RQG5 324 aaPredicted RBP14.98□□□□□ -0.01
PDGFD-201ENST00000302251 CHMP3Q9Y3E7 222 aa14.98□□□□□ -0.01
PDGFD-201ENST00000302251 DISP3Q9P2K9 1392 aa14.98□□□□□ -0.01
PDGFD-201ENST00000302251 CDK11BP21127 795 aaKnown RBP14.98□□□□□ -0.01
PDGFD-201ENST00000302251 TNNQ9UQP3 1299 aa14.98□□□□□ -0.01
PDGFD-201ENST00000302251 PLA2R1Q13018 1463 aa14.98□□□□□ -0.01
PDGFD-201ENST00000302251 NOB1Q9ULX3 412 aaKnown RBP14.98□□□□□ -0.01
PDGFD-201ENST00000302251 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.98□□□□□ -0.01
PDGFD-201ENST00000302251 ERBINQ96RT1 1412 aa14.97□□□□□ -0.01
PDGFD-201ENST00000302251 LAMC1P11047 1609 aa14.97□□□□□ -0.01
PDGFD-201ENST00000302251 HMOX1P09601 288 aa14.97□□□□□ -0.01
PDGFD-201ENST00000302251 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.97□□□□□ -0.01
PDGFD-201ENST00000302251 HDGFL2Q7Z4V5 671 aaPredicted RBP14.97□□□□□ -0.01
PDGFD-201ENST00000302251 SYAP1Q96A49 352 aaPredicted RBP14.97□□□□□ -0.01
PDGFD-201ENST00000302251 PLXNC1O60486 1568 aa14.96□□□□□ -0.01
PDGFD-201ENST00000302251 FGD1P98174 961 aa14.96□□□□□ -0.01
PDGFD-201ENST00000302251 PCDHB15Q9Y5E8 787 aa14.96□□□□□ -0.01
PDGFD-201ENST00000302251 MAGI2Q86UL8 1455 aa14.96□□□□□ -0.01
PDGFD-201ENST00000302251 SPINK5Q9NQ38 1064 aaPredicted RBP14.96□□□□□ -0.01
PDGFD-201ENST00000302251 IQGAP3Q86VI3 1631 aa14.96□□□□□ -0.01
PDGFD-201ENST00000302251 RRP9O43818 475 aaKnown RBP14.96□□□□□ -0.02
PDGFD-201ENST00000302251 ZRSR1Q15695 479 aaKnown RBP14.96□□□□□ -0.02
PDGFD-201ENST00000302251 NUTM2FA1L443 756 aa14.95□□□□□ -0.02
PDGFD-201ENST00000302251 MVPQ14764 893 aaKnown RBP14.95□□□□□ -0.02
PDGFD-201ENST00000302251 RARSP54136 660 aaKnown RBP14.95□□□□□ -0.02
PDGFD-201ENST00000302251 RNF17Q9BXT8 1623 aaKnown RBP14.94□□□□□ -0.02
PDGFD-201ENST00000302251 NGEFQ8N5V2 710 aa14.94□□□□□ -0.02
PDGFD-201ENST00000302251 MINK1Q8N4C8 1332 aaPredicted RBP14.94□□□□□ -0.02
PDGFD-201ENST00000302251 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.93□□□□□ -0.02
PDGFD-201ENST00000302251 CABP2Q9NPB3 220 aa14.93□□□□□ -0.02
PDGFD-201ENST00000302251 LRPPRCP42704 1394 aaKnown RBP14.93□□□□□ -0.02
PDGFD-201ENST00000302251 PER1O15534 1290 aaPredicted RBP14.93□□□□□ -0.02
PDGFD-201ENST00000302251 FAM135AQ9P2D6 1515 aa14.92□□□□□ -0.02
PDGFD-201ENST00000302251 TNPO1Q92973 898 aaKnown RBP14.92□□□□□ -0.02
PDGFD-201ENST00000302251 TBC1D32Q96NH3 1257 aa14.92□□□□□ -0.02
PDGFD-201ENST00000302251 TERF2IPQ9NYB0 399 aa14.92□□□□□ -0.02
PDGFD-201ENST00000302251 CLASP1Q7Z460 1538 aa14.92□□□□□ -0.02
PDGFD-201ENST00000302251 NUCB2P80303 420 aa14.92□□□□□ -0.02
PDGFD-201ENST00000302251 CFAP44Q96MT7 982 aa14.91□□□□□ -0.02
PDGFD-201ENST00000302251 NECTIN2Q92692 538 aa14.91□□□□□ -0.02
PDGFD-201ENST00000302251 ANO2Q9NQ90 1003 aa14.91□□□□□ -0.02
PDGFD-201ENST00000302251 DIAPH1O60610 1272 aaKnown RBP14.9□□□□□ -0.02
PDGFD-201ENST00000302251 TPM2P07951 284 aa14.9□□□□□ -0.02
PDGFD-201ENST00000302251 ATF7IPQ6VMQ6 1270 aa14.9□□□□□ -0.02
PDGFD-201ENST00000302251 TMEM57Q8N5G2 664 aa14.9□□□□□ -0.02
PDGFD-201ENST00000302251 CCDC173Q0VFZ6 552 aa14.9□□□□□ -0.02
PDGFD-201ENST00000302251 ZCCHC11Q5TAX3 1644 aaKnown RBP14.9□□□□□ -0.02
PDGFD-201ENST00000302251 PLEKHH1Q9ULM0 1364 aa14.9□□□□□ -0.02
PDGFD-201ENST00000302251 PRDM15P57071 1507 aaPredicted RBP14.9□□□□□ -0.02
PDGFD-201ENST00000302251 XPCQ01831 940 aaPredicted RBP14.9□□□□□ -0.02
PDGFD-201ENST00000302251 RTF1Q92541 710 aaKnown RBP14.9□□□□□ -0.02
PDGFD-201ENST00000302251 SSFA2P28290 1259 aa14.89□□□□□ -0.03
PDGFD-201ENST00000302251 MLECQ14165 292 aa14.89□□□□□ -0.03
PDGFD-201ENST00000302251 SYCP2Q9BX26 1530 aa14.89□□□□□ -0.03
PDGFD-201ENST00000302251 K7ELQ4 463 aaPredicted RBP14.89□□□□□ -0.03
PDGFD-201ENST00000302251 PRDM10Q9NQV6 1147 aa14.89□□□□□ -0.03
PDGFD-201ENST00000302251 NEK4P51957 841 aa14.88□□□□□ -0.03
PDGFD-201ENST00000302251 DEPDC5O75140 1603 aa14.88□□□□□ -0.03
PDGFD-201ENST00000302251 TESK2Q96S53 571 aa14.88□□□□□ -0.03
PDGFD-201ENST00000302251 CDC45O75419 566 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms