RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 TRAK1Q9UPV9 953 aa31.37■■■□□ 2.61
FOXA3-201ENST00000302177 NSD3Q9BZ95 1437 aa31.36■■■□□ 2.61
FOXA3-201ENST00000302177 MORC1Q86VD1 984 aa31.35■■■□□ 2.61
FOXA3-201ENST00000302177 SPINK5Q9NQ38 1064 aaPredicted RBP31.35■■■□□ 2.61
FOXA3-201ENST00000302177 PIK3C2BO00750 1634 aa31.34■■■□□ 2.61
FOXA3-201ENST00000302177 CAMSAP1Q5T5Y3 1602 aa31.34■■■□□ 2.61
FOXA3-201ENST00000302177 NINLQ9Y2I6 1382 aa31.33■■■□□ 2.61
FOXA3-201ENST00000302177 VGFO15240 615 aaPredicted RBP31.32■■■□□ 2.6
FOXA3-201ENST00000302177 ARHGAP31Q2M1Z3 1444 aa31.32■■■□□ 2.6
FOXA3-201ENST00000302177 NCBP3Q53F19 620 aaKnown RBP31.32■■■□□ 2.6
FOXA3-201ENST00000302177 NPM2Q86SE8 214 aaKnown RBP31.3■■■□□ 2.6
FOXA3-201ENST00000302177 SLC12A5Q9H2X9 1139 aa31.3■■■□□ 2.6
FOXA3-201ENST00000302177 WWC1Q8IX03 1113 aa31.3■■■□□ 2.6
FOXA3-201ENST00000302177 DDRGK1Q96HY6 314 aa31.3■■■□□ 2.6
FOXA3-201ENST00000302177 PDE3AQ14432 1141 aa31.29■■■□□ 2.6
FOXA3-201ENST00000302177 SHPRHQ149N8 1683 aa31.29■■■□□ 2.6
FOXA3-201ENST00000302177 NSD2O96028 1365 aa31.28■■■□□ 2.6
FOXA3-201ENST00000302177 CGNL1Q0VF96 1302 aa31.28■■■□□ 2.6
FOXA3-201ENST00000302177 RUNDC1Q96C34 613 aa31.28■■■□□ 2.6
FOXA3-201ENST00000302177 ZFYVE9O95405 1425 aa31.27■■■□□ 2.6
FOXA3-201ENST00000302177 EVC2Q86UK5 1308 aa31.27■■■□□ 2.6
FOXA3-201ENST00000302177 NBR1Q14596 966 aa31.25■■■□□ 2.59
FOXA3-201ENST00000302177 TMEM132EQ6IEE7 984 aa31.25■■■□□ 2.59
FOXA3-201ENST00000302177 NEXMIFQ5QGS0 1516 aa31.25■■■□□ 2.59
FOXA3-201ENST00000302177 PHF23Q9BUL5 403 aaPredicted RBP31.24■■■□□ 2.59
FOXA3-201ENST00000302177 SIGLEC1Q9BZZ2 1709 aa31.23■■■□□ 2.59
FOXA3-201ENST00000302177 DEKP35659 375 aaKnown RBP31.23■■■□□ 2.59
FOXA3-201ENST00000302177 CFAP65Q6ZU64 1925 aaKnown RBP31.23■■■□□ 2.59
FOXA3-201ENST00000302177 ARHGEF40Q8TER5 1519 aa31.23■■■□□ 2.59
FOXA3-201ENST00000302177 BCAR3O75815 825 aa31.23■■■□□ 2.59
FOXA3-201ENST00000302177 BCL11AQ9H165 835 aa31.23■■■□□ 2.59
FOXA3-201ENST00000302177 ANKRD36BQ8N2N9 1353 aa31.22■■■□□ 2.59
FOXA3-201ENST00000302177 CFAP53Q96M91 514 aa31.22■■■□□ 2.59
FOXA3-201ENST00000302177 DIP2CQ9Y2E4 1556 aa31.22■■■□□ 2.59
FOXA3-201ENST00000302177 CCDC27Q2M243 656 aa31.21■■■□□ 2.59
FOXA3-201ENST00000302177 FAM161AQ3B820 660 aa31.21■■■□□ 2.59
FOXA3-201ENST00000302177 WDR63Q8IWG1 891 aa31.21■■■□□ 2.59
FOXA3-201ENST00000302177 IQSEC2Q5JU85 1478 aa31.21■■■□□ 2.59
FOXA3-201ENST00000302177 KDM4FA0A1W2PPD8 638 aa31.21■■■□□ 2.59
FOXA3-201ENST00000302177 RTL5Q5HYW3 569 aaPredicted RBP31.21■■■□□ 2.59
FOXA3-201ENST00000302177 DMRT2Q9Y5R5 561 aa31.21■■■□□ 2.59
FOXA3-201ENST00000302177 ARHGEF28Q8N1W1 1705 aaKnown RBP31.21■■■□□ 2.59
FOXA3-201ENST00000302177 AAMPQ13685 434 aa31.19■■■□□ 2.58
FOXA3-201ENST00000302177 SLC52A1Q9NWF4 448 aa31.19■■■□□ 2.58
FOXA3-201ENST00000302177 TULP4Q9NRJ4 1543 aa31.18■■■□□ 2.58
FOXA3-201ENST00000302177 USP35Q9P2H5 1018 aa31.17■■■□□ 2.58
FOXA3-201ENST00000302177 SKAP1Q86WV1 359 aa31.17■■■□□ 2.58
FOXA3-201ENST00000302177 MTHFSP49914 203 aa31.16■■■□□ 2.58
FOXA3-201ENST00000302177 TCP11L2Q8N4U5 519 aa31.15■■■□□ 2.58
FOXA3-201ENST00000302177 PPM1GO15355 546 aaPredicted RBP31.14■■■□□ 2.58
FOXA3-201ENST00000302177 MLECQ14165 292 aa31.13■■■□□ 2.57
FOXA3-201ENST00000302177 C8orf34Q49A92 452 aa31.12■■■□□ 2.57
FOXA3-201ENST00000302177 IDI1Q13907 227 aa31.1■■■□□ 2.57
FOXA3-201ENST00000302177 TNNT2P45379 298 aaPredicted RBP31.09■■■□□ 2.57
FOXA3-201ENST00000302177 CLUAP1Q96AJ1 413 aa31.08■■■□□ 2.57
FOXA3-201ENST00000302177 RARSP54136 660 aaKnown RBP31.07■■■□□ 2.56
FOXA3-201ENST00000302177 CANXP27824 592 aaKnown RBP31.05■■■□□ 2.56
FOXA3-201ENST00000302177 ABCC11Q96J66 1382 aa31.05■■■□□ 2.56
FOXA3-201ENST00000302177 MYH16Q9H6N6 1097 aa31.03■■■□□ 2.56
FOXA3-201ENST00000302177 IGHDP01880 384 aa31.02■■■□□ 2.56
FOXA3-201ENST00000302177 CABP2Q9NPB3 220 aa31.01■■■□□ 2.56
FOXA3-201ENST00000302177 ADGRB2O60241 1585 aa31.01■■■□□ 2.55
FOXA3-201ENST00000302177 MAPK8IP3Q9UPT6 1336 aa31.01■■■□□ 2.55
FOXA3-201ENST00000302177 MED14O60244 1454 aa31.01■■■□□ 2.55
FOXA3-201ENST00000302177 TMEM131LA2VDJ0 1609 aa31.01■■■□□ 2.55
FOXA3-201ENST00000302177 ATAD2Q6PL18 1390 aa31.01■■■□□ 2.55
FOXA3-201ENST00000302177 NEUROD2Q15784 382 aa31.01■■■□□ 2.55
FOXA3-201ENST00000302177 CT47B1P0C2W7 299 aaPredicted RBP31■■■□□ 2.55
FOXA3-201ENST00000302177 NUTM2DQ5VT03 806 aaPredicted RBP31■■■□□ 2.55
FOXA3-201ENST00000302177 RRP7AQ9Y3A4 280 aaKnown RBP31■■■□□ 2.55
FOXA3-201ENST00000302177 PREX1Q8TCU6 1659 aa30.99■■■□□ 2.55
FOXA3-201ENST00000302177 RGS3P49796 1198 aa30.99■■■□□ 2.55
FOXA3-201ENST00000302177 COG6Q9Y2V7 657 aa30.99■■■□□ 2.55
FOXA3-201ENST00000302177 PMFBP1Q8TBY8 1022 aa30.98■■■□□ 2.55
FOXA3-201ENST00000302177 PANK1Q8TE04 598 aa30.98■■■□□ 2.55
FOXA3-201ENST00000302177 PTPRMP28827 1452 aa30.97■■■□□ 2.55
FOXA3-201ENST00000302177 A0A1W2PP64 1363 aa30.97■■■□□ 2.55
FOXA3-201ENST00000302177 U2AF1L5P0DN76 240 aaPredicted RBP30.96■■■□□ 2.55
FOXA3-201ENST00000302177 U2AF1Q01081 240 aaKnown RBP eCLIP30.96■■■□□ 2.55
FOXA3-201ENST00000302177 AEBP2Q6ZN18 517 aaPredicted RBP30.96■■■□□ 2.55
FOXA3-201ENST00000302177 TERF2IPQ9NYB0 399 aa30.96■■■□□ 2.55
FOXA3-201ENST00000302177 ZMYM3Q14202 1370 aa30.95■■■□□ 2.55
FOXA3-201ENST00000302177 CLTCQ00610 1675 aaKnown RBP30.95■■■□□ 2.55
FOXA3-201ENST00000302177 NEFMP07197 916 aa30.95■■■□□ 2.54
FOXA3-201ENST00000302177 FRAT1Q92837 279 aaPredicted RBP30.94■■■□□ 2.54
FOXA3-201ENST00000302177 DAXXQ9UER7 740 aaPredicted RBP30.94■■■□□ 2.54
FOXA3-201ENST00000302177 LAS1LQ9Y4W2 734 aaKnown RBP30.94■■■□□ 2.54
FOXA3-201ENST00000302177 REREQ9P2R6 1566 aa30.93■■■□□ 2.54
FOXA3-201ENST00000302177 SRPK2P78362 688 aaKnown RBP30.93■■■□□ 2.54
FOXA3-201ENST00000302177 YTHDC2Q9H6S0 1430 aaKnown RBP30.92■■■□□ 2.54
FOXA3-201ENST00000302177 ANKRD26Q9UPS8 1709 aa30.91■■■□□ 2.54
FOXA3-201ENST00000302177 VIRMAQ69YN4 1812 aaKnown RBP30.89■■■□□ 2.54
FOXA3-201ENST00000302177 COL3A1P02461 1466 aaPredicted RBP30.89■■■□□ 2.54
FOXA3-201ENST00000302177 PLPPR3Q6T4P5 718 aa30.89■■■□□ 2.54
FOXA3-201ENST00000302177 PLEKHF1Q96S99 279 aa30.89■■■□□ 2.54
FOXA3-201ENST00000302177 ADAMTSL3P82987 1691 aa30.89■■■□□ 2.54
FOXA3-201ENST00000302177 MYO5BQ9ULV0 1848 aa30.89■■■□□ 2.53
FOXA3-201ENST00000302177 STK26Q9P289 416 aa30.88■■■□□ 2.53
FOXA3-201ENST00000302177 PPP6R1Q9UPN7 881 aa30.88■■■□□ 2.53
FOXA3-201ENST00000302177 AGLP35573 1532 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms