RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 UQCRHP07919 91 aa13.7□□□□□ -0.22
SNX20-201ENST00000300590 VIRMAQ69YN4 1812 aaKnown RBP13.69□□□□□ -0.22
SNX20-201ENST00000300590 ZHX1Q9UKY1 873 aaPredicted RBP13.69□□□□□ -0.22
SNX20-201ENST00000300590 U2AF1L5P0DN76 240 aaPredicted RBP13.69□□□□□ -0.22
SNX20-201ENST00000300590 PRDM15P57071 1507 aaPredicted RBP13.69□□□□□ -0.22
SNX20-201ENST00000300590 U2AF1Q01081 240 aaKnown RBP eCLIP13.69□□□□□ -0.22
SNX20-201ENST00000300590 MPNDQ8N594 471 aa13.69□□□□□ -0.22
SNX20-201ENST00000300590 GAS2L2Q8NHY3 880 aa13.69□□□□□ -0.22
SNX20-201ENST00000300590 AAMPQ13685 434 aa13.68□□□□□ -0.22
SNX20-201ENST00000300590 SMC5Q8IY18 1101 aa13.68□□□□□ -0.22
SNX20-201ENST00000300590 RTEL1-TNFRSF6BF6WH68 1400 aa13.68□□□□□ -0.22
SNX20-201ENST00000300590 TRIM27P14373 513 aa13.68□□□□□ -0.22
SNX20-201ENST00000300590 CALD1Q05682 793 aaKnown RBP13.68□□□□□ -0.22
SNX20-201ENST00000300590 EXOSC9Q06265 439 aaKnown RBP13.68□□□□□ -0.22
SNX20-201ENST00000300590 FOXD4L5Q5VV16 416 aaPredicted RBP13.68□□□□□ -0.22
SNX20-201ENST00000300590 FOXD4L4Q8WXT5 416 aaPredicted RBP13.68□□□□□ -0.22
SNX20-201ENST00000300590 PTPRGP23470 1445 aa13.68□□□□□ -0.22
SNX20-201ENST00000300590 MTHFSP49914 203 aa13.67□□□□□ -0.22
SNX20-201ENST00000300590 PDE4CQ08493 712 aa13.67□□□□□ -0.22
SNX20-201ENST00000300590 ANKRD45Q5TZF3 282 aa13.67□□□□□ -0.22
SNX20-201ENST00000300590 EIF4G3O43432 1585 aaKnown RBP13.67□□□□□ -0.22
SNX20-201ENST00000300590 CFAP70Q5T0N1 1121 aa13.67□□□□□ -0.22
SNX20-201ENST00000300590 PRDM4Q9UKN5 801 aa13.67□□□□□ -0.22
SNX20-201ENST00000300590 KIAA0556O60303 1618 aa13.67□□□□□ -0.22
SNX20-201ENST00000300590 DDIT3P35638 169 aa13.66□□□□□ -0.22
SNX20-201ENST00000300590 PPP1R9BQ96SB3 815 aa13.66□□□□□ -0.22
SNX20-201ENST00000300590 ITSN2Q9NZM3 1697 aa13.66□□□□□ -0.22
SNX20-201ENST00000300590 BAG4O95429 457 aaKnown RBP13.66□□□□□ -0.22
SNX20-201ENST00000300590 TMEM57Q8N5G2 664 aa13.66□□□□□ -0.22
SNX20-201ENST00000300590 NOB1Q9ULX3 412 aaKnown RBP13.66□□□□□ -0.22
SNX20-201ENST00000300590 K7ELQ4 463 aaPredicted RBP13.66□□□□□ -0.22
SNX20-201ENST00000300590 NGEFQ8N5V2 710 aa13.66□□□□□ -0.22
SNX20-201ENST00000300590 SSH1Q8WYL5 1049 aa13.66□□□□□ -0.22
SNX20-201ENST00000300590 JPH4Q96JJ6 628 aa13.66□□□□□ -0.22
SNX20-201ENST00000300590 CHAMP1Q96JM3 812 aa13.66□□□□□ -0.22
SNX20-201ENST00000300590 RBM27Q9P2N5 1060 aaKnown RBP13.66□□□□□ -0.22
SNX20-201ENST00000300590 RNF214Q8ND24 703 aa13.65□□□□□ -0.22
SNX20-201ENST00000300590 SENP3Q9H4L4 574 aaPredicted RBP13.65□□□□□ -0.22
SNX20-201ENST00000300590 C1orf115Q9H7X2 142 aa13.65□□□□□ -0.22
SNX20-201ENST00000300590 CIZ1Q9ULV3 898 aaPredicted RBP13.65□□□□□ -0.22
SNX20-201ENST00000300590 U2SURPO15042 1029 aaKnown RBP13.65□□□□□ -0.22
SNX20-201ENST00000300590 TPRNQ4KMQ1 711 aa13.65□□□□□ -0.22
SNX20-201ENST00000300590 SNX21Q969T3 373 aa13.65□□□□□ -0.22
SNX20-201ENST00000300590 RBSNQ9H1K0 784 aa13.65□□□□□ -0.22
SNX20-201ENST00000300590 SLC12A5Q9H2X9 1139 aa13.65□□□□□ -0.22
SNX20-201ENST00000300590 RBM25P49756 843 aaKnown RBP13.64□□□□□ -0.23
SNX20-201ENST00000300590 DDX19BQ9UMR2 479 aa13.64□□□□□ -0.23
SNX20-201ENST00000300590 DNTTIP2Q5QJE6 756 aaKnown RBP13.64□□□□□ -0.23
SNX20-201ENST00000300590 WDR63Q8IWG1 891 aa13.64□□□□□ -0.23
SNX20-201ENST00000300590 JARID2Q92833 1246 aaPredicted RBP13.64□□□□□ -0.23
SNX20-201ENST00000300590 PRIM1P49642 420 aaKnown RBP13.63□□□□□ -0.23
SNX20-201ENST00000300590 FGD1P98174 961 aa13.63□□□□□ -0.23
SNX20-201ENST00000300590 CROCC2H7BZ55 1655 aa13.63□□□□□ -0.23
SNX20-201ENST00000300590 PRPF40AO75400 957 aaKnown RBP13.63□□□□□ -0.23
SNX20-201ENST00000300590 PKP1Q13835 747 aa13.63□□□□□ -0.23
SNX20-201ENST00000300590 KLHL40Q2TBA0 621 aa13.63□□□□□ -0.23
SNX20-201ENST00000300590 ADCY10Q96PN6 1610 aa13.63□□□□□ -0.23
SNX20-201ENST00000300590 CLASP1Q7Z460 1538 aa13.63□□□□□ -0.23
SNX20-201ENST00000300590 KIF2CQ99661 725 aa13.62□□□□□ -0.23
SNX20-201ENST00000300590 ABCC2Q92887 1545 aa13.62□□□□□ -0.23
SNX20-201ENST00000300590 ZSCAN23Q3MJ62 389 aa13.62□□□□□ -0.23
SNX20-201ENST00000300590 TSC1Q92574 1164 aa13.62□□□□□ -0.23
SNX20-201ENST00000300590 PTMAP06454 111 aaKnown RBP13.62□□□□□ -0.23
SNX20-201ENST00000300590 ATF7IPQ6VMQ6 1270 aa13.62□□□□□ -0.23
SNX20-201ENST00000300590 CHD1LQ86WJ1 897 aa13.62□□□□□ -0.23
SNX20-201ENST00000300590 HDAC1Q13547 482 aaPredicted RBP13.61□□□□□ -0.23
SNX20-201ENST00000300590 ADAMTS12P58397 1594 aa13.61□□□□□ -0.23
SNX20-201ENST00000300590 TBC1D9Q6ZT07 1266 aa13.61□□□□□ -0.23
SNX20-201ENST00000300590 CFAP53Q96M91 514 aa13.61□□□□□ -0.23
SNX20-201ENST00000300590 CHGAP10645 457 aaKnown RBP13.6□□□□□ -0.23
SNX20-201ENST00000300590 PTMSP20962 102 aa13.6□□□□□ -0.23
SNX20-201ENST00000300590 MAGI1Q96QZ7 1491 aaPredicted RBP13.6□□□□□ -0.23
SNX20-201ENST00000300590 CCDC141Q6ZP82 1450 aa13.6□□□□□ -0.23
SNX20-201ENST00000300590 TARBP1Q13395 1621 aaKnown RBP13.6□□□□□ -0.23
SNX20-201ENST00000300590 FOXD4L6Q3SYB3 417 aaPredicted RBP13.59□□□□□ -0.23
SNX20-201ENST00000300590 FOXD4L3Q6VB84 417 aaPredicted RBP13.59□□□□□ -0.23
SNX20-201ENST00000300590 TRAK1Q9UPV9 953 aa13.59□□□□□ -0.23
SNX20-201ENST00000300590 SHANK2Q9UPX8 1470 aa13.59□□□□□ -0.23
SNX20-201ENST00000300590 FAM177BA6PVY3 158 aa13.59□□□□□ -0.23
SNX20-201ENST00000300590 NUCB1Q02818 461 aa13.59□□□□□ -0.23
SNX20-201ENST00000300590 NOL7Q9UMY1 257 aaKnown RBP13.59□□□□□ -0.23
SNX20-201ENST00000300590 CDC42BPAQ5VT25 1732 aa13.59□□□□□ -0.23
SNX20-201ENST00000300590 MAP7D2Q96T17 732 aa13.59□□□□□ -0.23
SNX20-201ENST00000300590 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.59□□□□□ -0.23
SNX20-201ENST00000300590 SYCE3A1L190 88 aa13.58□□□□□ -0.24
SNX20-201ENST00000300590 PBRM1Q86U86 1689 aa13.58□□□□□ -0.24
SNX20-201ENST00000300590 NCOA3Q9Y6Q9 1424 aa13.58□□□□□ -0.24
SNX20-201ENST00000300590 ZMYM3Q14202 1370 aa13.58□□□□□ -0.24
SNX20-201ENST00000300590 AK9Q5TCS8 1911 aa13.58□□□□□ -0.24
SNX20-201ENST00000300590 ELL2O00472 640 aaPredicted RBP13.57□□□□□ -0.24
SNX20-201ENST00000300590 ZBTB40Q9NUA8 1239 aa13.57□□□□□ -0.24
SNX20-201ENST00000300590 SCAF11Q99590 1463 aaKnown RBP13.57□□□□□ -0.24
SNX20-201ENST00000300590 POLR3AO14802 1390 aaPredicted RBP13.57□□□□□ -0.24
SNX20-201ENST00000300590 ABCC10Q5T3U5 1492 aa13.57□□□□□ -0.24
SNX20-201ENST00000300590 APBB1O00213 710 aa13.57□□□□□ -0.24
SNX20-201ENST00000300590 NPC1L1Q9UHC9 1359 aa13.57□□□□□ -0.24
SNX20-201ENST00000300590 ZKSCAN5Q9Y2L8 839 aa13.56□□□□□ -0.24
SNX20-201ENST00000300590 NUP160Q12769 1436 aa13.56□□□□□ -0.24
SNX20-201ENST00000300590 ATP10BO94823 1461 aa13.56□□□□□ -0.24
SNX20-201ENST00000300590 NSD3Q9BZ95 1437 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms