RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 IPO7O95373 1038 aaKnown RBP15.51■□□□□ 0.07
CLPX-201ENST00000300107 NEXNQ0ZGT2 675 aa15.51■□□□□ 0.07
CLPX-201ENST00000300107 BCAR3O75815 825 aa15.51■□□□□ 0.07
CLPX-201ENST00000300107 EIF2S2P20042 333 aaKnown RBP15.51■□□□□ 0.07
CLPX-201ENST00000300107 HSP90AB4PQ58FF6 505 aa15.51■□□□□ 0.07
CLPX-201ENST00000300107 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.51■□□□□ 0.07
CLPX-201ENST00000300107 MNS1Q8NEH6 495 aa15.51■□□□□ 0.07
CLPX-201ENST00000300107 AKAP17AQ02040 695 aaKnown RBP15.5■□□□□ 0.07
CLPX-201ENST00000300107 ESPNB1AK53 854 aa15.5■□□□□ 0.07
CLPX-201ENST00000300107 MCM4P33991 863 aa15.5■□□□□ 0.07
CLPX-201ENST00000300107 MCM2P49736 904 aa15.5■□□□□ 0.07
CLPX-201ENST00000300107 NEK4P51957 841 aa15.5■□□□□ 0.07
CLPX-201ENST00000300107 PKNOX2Q96KN3 472 aa15.5■□□□□ 0.07
CLPX-201ENST00000300107 SYNE3Q6ZMZ3 975 aa15.5■□□□□ 0.07
CLPX-201ENST00000300107 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.49■□□□□ 0.07
CLPX-201ENST00000300107 LETM1O95202 739 aaPredicted RBP15.49■□□□□ 0.07
CLPX-201ENST00000300107 TRIM29Q14134 588 aa15.49■□□□□ 0.07
CLPX-201ENST00000300107 ERC2O15083 957 aa15.49■□□□□ 0.07
CLPX-201ENST00000300107 RBM10P98175 930 aaKnown RBP15.48■□□□□ 0.07
CLPX-201ENST00000300107 NECTIN2Q92692 538 aa15.48■□□□□ 0.07
CLPX-201ENST00000300107 TSPY26PQ9H489 355 aa15.48■□□□□ 0.07
CLPX-201ENST00000300107 ARAP1Q96P48 1450 aa15.48■□□□□ 0.07
CLPX-201ENST00000300107 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.48■□□□□ 0.07
CLPX-201ENST00000300107 G3BP1Q13283 466 aaKnown RBP eCLIP15.48■□□□□ 0.074e-7■■□□□ 13.8
CLPX-201ENST00000300107 TMEM132EQ6IEE7 984 aa15.48■□□□□ 0.07
CLPX-201ENST00000300107 GGNBP2Q9H3C7 697 aa15.48■□□□□ 0.07
CLPX-201ENST00000300107 NCOA2Q15596 1464 aa15.48■□□□□ 0.07
CLPX-201ENST00000300107 GTF2E1P29083 439 aaPredicted RBP15.47■□□□□ 0.07
CLPX-201ENST00000300107 EXOSC9Q06265 439 aaKnown RBP15.47■□□□□ 0.07
CLPX-201ENST00000300107 ANKRD20A12PQ8NF67 263 aa15.47■□□□□ 0.07
CLPX-201ENST00000300107 HMOX1P09601 288 aa15.47■□□□□ 0.07
CLPX-201ENST00000300107 GCC1Q96CN9 775 aa15.47■□□□□ 0.07
CLPX-201ENST00000300107 CEP89Q96ST8 783 aa15.47■□□□□ 0.07
CLPX-201ENST00000300107 HOOK1Q9UJC3 728 aaKnown RBP15.47■□□□□ 0.07
CLPX-201ENST00000300107 CASKIN1Q8WXD9 1431 aa15.47■□□□□ 0.07
CLPX-201ENST00000300107 NCAPD3P42695 1498 aa15.47■□□□□ 0.07
CLPX-201ENST00000300107 TRIM5Q9C035 493 aa15.47■□□□□ 0.07
CLPX-201ENST00000300107 C1orf141Q5JVX7 400 aa15.46■□□□□ 0.07
CLPX-201ENST00000300107 RRP9O43818 475 aaKnown RBP15.46■□□□□ 0.07
CLPX-201ENST00000300107 CIZ1Q9ULV3 898 aaPredicted RBP15.46■□□□□ 0.07
CLPX-201ENST00000300107 CWC22Q9HCG8 908 aaKnown RBP15.46■□□□□ 0.06
CLPX-201ENST00000300107 MARCH6O60337 910 aa15.45■□□□□ 0.06
CLPX-201ENST00000300107 TSPYL4Q9UJ04 414 aa15.45■□□□□ 0.06
CLPX-201ENST00000300107 FYCO1Q9BQS8 1478 aa15.45■□□□□ 0.06
CLPX-201ENST00000300107 SDF4Q9BRK5 362 aa15.45■□□□□ 0.06
CLPX-201ENST00000300107 FBXW7Q969H0 707 aa15.44■□□□□ 0.06
CLPX-201ENST00000300107 NAT10Q9H0A0 1025 aaKnown RBP15.44■□□□□ 0.06
CLPX-201ENST00000300107 NINLQ9Y2I6 1382 aa15.44■□□□□ 0.06
CLPX-201ENST00000300107 K7ELQ4 463 aaPredicted RBP15.44■□□□□ 0.06
CLPX-201ENST00000300107 PDE4CQ08493 712 aa15.44■□□□□ 0.06
CLPX-201ENST00000300107 TRDNQ13061 729 aa15.44■□□□□ 0.06
CLPX-201ENST00000300107 NBPF1Q3BBV0 1214 aa15.44■□□□□ 0.06
CLPX-201ENST00000300107 DDX58O95786 925 aaKnown RBP15.43■□□□□ 0.06
CLPX-201ENST00000300107 EVA1CP58658 441 aa15.43■□□□□ 0.06
CLPX-201ENST00000300107 HSP90B2PQ58FF3 399 aa15.43■□□□□ 0.06
CLPX-201ENST00000300107 CCDC66A2RUB6 948 aa15.43■□□□□ 0.06
CLPX-201ENST00000300107 PDCP20941 246 aa15.43■□□□□ 0.06
CLPX-201ENST00000300107 ACBD3Q9H3P7 528 aa15.43■□□□□ 0.06
CLPX-201ENST00000300107 PSME1Q06323 249 aa15.42■□□□□ 0.06
CLPX-201ENST00000300107 WDR97A6NE52 1622 aa15.42■□□□□ 0.06
CLPX-201ENST00000300107 GNAI3P08754 354 aa15.42■□□□□ 0.06
CLPX-201ENST00000300107 UBTFL1P0CB47 393 aaPredicted RBP15.42■□□□□ 0.06
CLPX-201ENST00000300107 CCDC27Q2M243 656 aa15.42■□□□□ 0.06
CLPX-201ENST00000300107 FIBPO43427 364 aa15.41■□□□□ 0.06
CLPX-201ENST00000300107 PSMA5P28066 241 aa15.41■□□□□ 0.06
CLPX-201ENST00000300107 BCL11BQ9C0K0 894 aaPredicted RBP15.41■□□□□ 0.06
CLPX-201ENST00000300107 NESP48681 1621 aa15.41■□□□□ 0.06
CLPX-201ENST00000300107 PCMTD1Q96MG8 357 aaPredicted RBP15.41■□□□□ 0.06
CLPX-201ENST00000300107 CT47B1P0C2W7 299 aaPredicted RBP15.4■□□□□ 0.06
CLPX-201ENST00000300107 NOM1Q5C9Z4 860 aaKnown RBP15.4■□□□□ 0.06
CLPX-201ENST00000300107 NUTM2GQ5VZR2 741 aa15.4■□□□□ 0.06
CLPX-201ENST00000300107 APPP05067 770 aa15.4■□□□□ 0.06
CLPX-201ENST00000300107 MVPQ14764 893 aaKnown RBP15.4■□□□□ 0.06
CLPX-201ENST00000300107 HFM1A2PYH4 1435 aa15.4■□□□□ 0.06
CLPX-201ENST00000300107 CNTROBQ8N137 903 aa15.4■□□□□ 0.06
CLPX-201ENST00000300107 NOB1Q9ULX3 412 aaKnown RBP15.4■□□□□ 0.06
CLPX-201ENST00000300107 WDR63Q8IWG1 891 aa15.4■□□□□ 0.06
CLPX-201ENST00000300107 CLASRPQ8N2M8 674 aaKnown RBP15.4■□□□□ 0.06
CLPX-201ENST00000300107 TMX4Q9H1E5 349 aaPredicted RBP15.4■□□□□ 0.06
CLPX-201ENST00000300107 CFAP70Q5T0N1 1121 aa15.39■□□□□ 0.05
CLPX-201ENST00000300107 ATF7IPQ6VMQ6 1270 aa15.39■□□□□ 0.05
CLPX-201ENST00000300107 TSR2Q969E8 191 aaKnown RBP15.39■□□□□ 0.05
CLPX-201ENST00000300107 CCDC47Q96A33 483 aaKnown RBP15.39■□□□□ 0.05
CLPX-201ENST00000300107 C1orf115Q9H7X2 142 aa15.39■□□□□ 0.05
CLPX-201ENST00000300107 CABP2Q9NPB3 220 aa15.39■□□□□ 0.05
CLPX-201ENST00000300107 FOSBP53539 338 aa15.39■□□□□ 0.05
CLPX-201ENST00000300107 KINO60870 393 aaKnown RBP15.38■□□□□ 0.05
CLPX-201ENST00000300107 SURF6O75683 361 aaKnown RBP15.38■□□□□ 0.05
CLPX-201ENST00000300107 ZSCAN30Q86W11 494 aa15.38■□□□□ 0.05
CLPX-201ENST00000300107 ERICH3Q5RHP9 1530 aa15.38■□□□□ 0.05
CLPX-201ENST00000300107 PRKCSHP14314 528 aaPredicted RBP15.38■□□□□ 0.05
CLPX-201ENST00000300107 SAFBQ15424 915 aaKnown RBP eCLIP15.38■□□□□ 0.05
CLPX-201ENST00000300107 TWISTNBQ3B726 338 aaPredicted RBP15.38■□□□□ 0.05
CLPX-201ENST00000300107 PRKAR2BP31323 418 aa15.37■□□□□ 0.05
CLPX-201ENST00000300107 TTC5Q8N0Z6 440 aa15.37■□□□□ 0.05
CLPX-201ENST00000300107 SYTL4Q96C24 671 aaPredicted RBP15.37■□□□□ 0.05
CLPX-201ENST00000300107 WDR33Q9C0J8 1336 aaKnown RBP15.37■□□□□ 0.05
CLPX-201ENST00000300107 UQCRHLA0A096LP55 91 aa15.37■□□□□ 0.05
CLPX-201ENST00000300107 UQCRHP07919 91 aa15.37■□□□□ 0.05
CLPX-201ENST00000300107 NCBP3Q53F19 620 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms