RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 SRPK2P78362 688 aaKnown RBP34.6■■■■□ 3.13
SDCCAG3-201ENST00000298537 SUPT16HQ9Y5B9 1047 aaKnown RBP34.6■■■■□ 3.13
SDCCAG3-201ENST00000298537 NPC1L1Q9UHC9 1359 aa34.57■■■■□ 3.13
SDCCAG3-201ENST00000298537 NLRP1Q9C000 1473 aa34.57■■■■□ 3.12
SDCCAG3-201ENST00000298537 TXNDC2Q86VQ3 553 aa34.54■■■■□ 3.12
SDCCAG3-201ENST00000298537 HDGFP51858 240 aaKnown RBP34.52■■■■□ 3.12
SDCCAG3-201ENST00000298537 ABCC11Q96J66 1382 aa34.51■■■■□ 3.12
SDCCAG3-201ENST00000298537 PELP1Q8IZL8 1130 aaKnown RBP34.51■■■■□ 3.12
SDCCAG3-201ENST00000298537 PUS7Q96PZ0 661 aaKnown RBP34.51■■■■□ 3.12
SDCCAG3-201ENST00000298537 CDK19Q9BWU1 502 aa34.51■■■■□ 3.12
SDCCAG3-201ENST00000298537 SALL2Q9Y467 1007 aaPredicted RBP34.5■■■■□ 3.11
SDCCAG3-201ENST00000298537 FKBP8Q14318 412 aa34.49■■■■□ 3.11
SDCCAG3-201ENST00000298537 ADAMTS13Q76LX8 1427 aa34.49■■■■□ 3.11
SDCCAG3-201ENST00000298537 DLC1Q96QB1 1528 aa34.48■■■■□ 3.11
SDCCAG3-201ENST00000298537 ANKRD36BQ8N2N9 1353 aa34.46■■■■□ 3.11
SDCCAG3-201ENST00000298537 TNNT2P45379 298 aaPredicted RBP34.46■■■■□ 3.11
SDCCAG3-201ENST00000298537 SLC26A8Q96RN1 970 aa34.46■■■■□ 3.11
SDCCAG3-201ENST00000298537 A0A1W2PP64 1363 aa34.45■■■■□ 3.1
SDCCAG3-201ENST00000298537 ADAMTS8Q9UP79 889 aa34.44■■■■□ 3.1
SDCCAG3-201ENST00000298537 RIMS1Q86UR5 1692 aaKnown RBP34.43■■■■□ 3.1
SDCCAG3-201ENST00000298537 PLEKHG1Q9ULL1 1385 aa34.41■■■■□ 3.1
SDCCAG3-201ENST00000298537 CD163L1Q9NR16 1453 aa34.39■■■■□ 3.1
SDCCAG3-201ENST00000298537 ATAD2Q6PL18 1390 aa34.39■■■■□ 3.1
SDCCAG3-201ENST00000298537 MORC1Q86VD1 984 aa34.39■■■■□ 3.1
SDCCAG3-201ENST00000298537 CABP1Q9NZU7 370 aa34.38■■■■□ 3.09
SDCCAG3-201ENST00000298537 EID1Q9Y6B2 187 aa34.37■■■■□ 3.09
SDCCAG3-201ENST00000298537 ARHGAP23Q9P227 1491 aa34.37■■■■□ 3.09
SDCCAG3-201ENST00000298537 ROBO2Q9HCK4 1378 aa34.37■■■■□ 3.09
SDCCAG3-201ENST00000298537 SLIT1O75093 1534 aa34.36■■■■□ 3.09
SDCCAG3-201ENST00000298537 IRX6P78412 446 aaPredicted RBP34.36■■■■□ 3.09
SDCCAG3-201ENST00000298537 CGNL1Q0VF96 1302 aa34.36■■■■□ 3.09
SDCCAG3-201ENST00000298537 BLMP54132 1417 aaPredicted RBP34.35■■■■□ 3.09
SDCCAG3-201ENST00000298537 TECPR2O15040 1411 aa34.34■■■■□ 3.09
SDCCAG3-201ENST00000298537 THEMISQ8N1K5 641 aaPredicted RBP34.33■■■■□ 3.09
SDCCAG3-201ENST00000298537 NCKAP5LQ9HCH0 1330 aa34.33■■■■□ 3.09
SDCCAG3-201ENST00000298537 PTPRUQ92729 1446 aa34.33■■■■□ 3.09
SDCCAG3-201ENST00000298537 USP32Q8NFA0 1604 aa34.32■■■■□ 3.08
SDCCAG3-201ENST00000298537 MED14O60244 1454 aa34.32■■■■□ 3.08
SDCCAG3-201ENST00000298537 WASLO00401 505 aaPredicted RBP34.31■■■■□ 3.08
SDCCAG3-201ENST00000298537 WDR43Q15061 677 aaKnown RBP eCLIP34.31■■■■□ 3.08
SDCCAG3-201ENST00000298537 NINLQ9Y2I6 1382 aa34.3■■■■□ 3.08
SDCCAG3-201ENST00000298537 KNDC1Q76NI1 1749 aa34.3■■■■□ 3.08
SDCCAG3-201ENST00000298537 CPS1P31327 1500 aa34.3■■■■□ 3.08
SDCCAG3-201ENST00000298537 NEFLP07196 543 aa34.3■■■■□ 3.08
SDCCAG3-201ENST00000298537 GGNBP2Q9H3C7 697 aa34.29■■■■□ 3.08
SDCCAG3-201ENST00000298537 SMG6Q86US8 1419 aaKnown RBP34.29■■■■□ 3.08
SDCCAG3-201ENST00000298537 FAM135BQ49AJ0 1406 aa34.28■■■■□ 3.08
SDCCAG3-201ENST00000298537 ADAMTSL3P82987 1691 aa34.27■■■■□ 3.08
SDCCAG3-201ENST00000298537 NUDCQ9Y266 331 aa34.27■■■■□ 3.08
SDCCAG3-201ENST00000298537 TERF2IPQ9NYB0 399 aa34.26■■■■□ 3.08
SDCCAG3-201ENST00000298537 CEP170BQ9Y4F5 1589 aaPredicted RBP34.26■■■■□ 3.08
SDCCAG3-201ENST00000298537 CCDC146Q8IYE0 955 aa34.24■■■■□ 3.07
SDCCAG3-201ENST00000298537 SIRT1Q96EB6 747 aa34.24■■■■□ 3.07
SDCCAG3-201ENST00000298537 FYB1O15117 783 aa34.23■■■■□ 3.07
SDCCAG3-201ENST00000298537 CDCA7LQ96GN5 454 aa34.22■■■■□ 3.07
SDCCAG3-201ENST00000298537 AMOTL2Q9Y2J4 779 aa34.21■■■■□ 3.07
SDCCAG3-201ENST00000298537 MTHFSP49914 203 aa34.21■■■■□ 3.07
SDCCAG3-201ENST00000298537 HDGFL2Q7Z4V5 671 aaPredicted RBP34.21■■■■□ 3.07
SDCCAG3-201ENST00000298537 INSRP06213 1382 aa34.21■■■■□ 3.07
SDCCAG3-201ENST00000298537 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.2■■■■□ 3.07
SDCCAG3-201ENST00000298537 NUDT16Q96DE0 195 aaKnown RBP34.2■■■■□ 3.06
SDCCAG3-201ENST00000298537 PRR36Q9H6K5 1346 aa34.19■■■■□ 3.06
SDCCAG3-201ENST00000298537 NUTM2FA1L443 756 aa34.19■■■■□ 3.06
SDCCAG3-201ENST00000298537 TBX22Q9Y458 520 aa34.19■■■■□ 3.06
SDCCAG3-201ENST00000298537 POLR3AO14802 1390 aaPredicted RBP34.18■■■■□ 3.06
SDCCAG3-201ENST00000298537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.18■■■■□ 3.06
SDCCAG3-201ENST00000298537 PPIP5K1Q6PFW1 1433 aa34.18■■■■□ 3.06
SDCCAG3-201ENST00000298537 NSD2O96028 1365 aa34.17■■■■□ 3.06
SDCCAG3-201ENST00000298537 FBLN1P23142 703 aa34.12■■■■□ 3.05
SDCCAG3-201ENST00000298537 ATP7BP35670 1465 aa34.11■■■■□ 3.05
SDCCAG3-201ENST00000298537 SHPRHQ149N8 1683 aa34.1■■■■□ 3.05
SDCCAG3-201ENST00000298537 CCDC61Q9Y6R9 512 aa34.1■■■■□ 3.05
SDCCAG3-201ENST00000298537 CPSF1Q10570 1443 aaKnown RBP34.09■■■■□ 3.05
SDCCAG3-201ENST00000298537 APAF1O14727 1248 aa34.07■■■■□ 3.04
SDCCAG3-201ENST00000298537 ZRANB1Q9UGI0 708 aa34.07■■■■□ 3.04
SDCCAG3-201ENST00000298537 KCNA6P17658 529 aa34.05■■■■□ 3.04
SDCCAG3-201ENST00000298537 NME9Q86XW9 330 aa34.03■■■■□ 3.04
SDCCAG3-201ENST00000298537 ADGRB2O60241 1585 aa34.02■■■■□ 3.04
SDCCAG3-201ENST00000298537 ANKLE2Q86XL3 938 aa34.02■■■■□ 3.04
SDCCAG3-201ENST00000298537 ZNF142P52746 1687 aaPredicted RBP34.02■■■■□ 3.04
SDCCAG3-201ENST00000298537 PDE3BQ13370 1112 aa34.02■■■■□ 3.04
SDCCAG3-201ENST00000298537 ANKRD26Q9UPS8 1709 aa34.02■■■■□ 3.04
SDCCAG3-201ENST00000298537 KIF20BQ96Q89 1820 aa34.01■■■■□ 3.04
SDCCAG3-201ENST00000298537 DIP2AQ14689 1571 aa34.01■■■■□ 3.03
SDCCAG3-201ENST00000298537 CDC42BPGQ6DT37 1551 aa34.01■■■■□ 3.03
SDCCAG3-201ENST00000298537 PTCH1Q13635 1447 aa34■■■■□ 3.03
SDCCAG3-201ENST00000298537 ZNF521Q96K83 1311 aa33.99■■■■□ 3.03
SDCCAG3-201ENST00000298537 RBM33Q96EV2 1170 aaKnown RBP33.98■■■■□ 3.03
SDCCAG3-201ENST00000298537 XRN1Q8IZH2 1706 aaKnown RBP33.98■■■■□ 3.03
SDCCAG3-201ENST00000298537 CFAP53Q96M91 514 aa33.98■■■■□ 3.03
SDCCAG3-201ENST00000298537 EDC4Q6P2E9 1401 aaKnown RBP33.97■■■■□ 3.03
SDCCAG3-201ENST00000298537 SETD1BQ9UPS6 1966 aaKnown RBP33.97■■■■□ 3.03
SDCCAG3-201ENST00000298537 NKTRP30414 1462 aaKnown RBP33.96■■■■□ 3.03
SDCCAG3-201ENST00000298537 RNF123Q5XPI4 1314 aa33.95■■■■□ 3.03
SDCCAG3-201ENST00000298537 DMRT2Q9Y5R5 561 aa33.93■■■■□ 3.02
SDCCAG3-201ENST00000298537 ACEP12821 1306 aa33.93■■■■□ 3.02
SDCCAG3-201ENST00000298537 SPINK5Q9NQ38 1064 aaPredicted RBP33.93■■■■□ 3.02
SDCCAG3-201ENST00000298537 RRP7AQ9Y3A4 280 aaKnown RBP33.92■■■■□ 3.02
SDCCAG3-201ENST00000298537 MON2Q7Z3U7 1717 aa33.91■■■■□ 3.02
SDCCAG3-201ENST00000298537 COL3A1P02461 1466 aaPredicted RBP33.91■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms