RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 SHPRHQ149N8 1683 aa13.1□□□□□ -0.31
TNFRSF11B-201ENST00000297350 VGFO15240 615 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF11B-201ENST00000297350 CENPQQ7L2Z9 268 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF11B-201ENST00000297350 CLTCQ00610 1675 aaKnown RBP13.09□□□□□ -0.31
TNFRSF11B-201ENST00000297350 GGT6Q6P531 493 aa13.09□□□□□ -0.31
TNFRSF11B-201ENST00000297350 CRBNQ96SW2 442 aa13.09□□□□□ -0.31
TNFRSF11B-201ENST00000297350 CARD14Q9BXL6 1004 aa13.09□□□□□ -0.31
TNFRSF11B-201ENST00000297350 TMEM131LA2VDJ0 1609 aa13.09□□□□□ -0.31
TNFRSF11B-201ENST00000297350 SPATA31D1Q6ZQQ2 1576 aa13.08□□□□□ -0.31
TNFRSF11B-201ENST00000297350 NSD3Q9BZ95 1437 aa13.08□□□□□ -0.32
TNFRSF11B-201ENST00000297350 SENP3-EIF4A1A0A087X0R7 540 aa13.08□□□□□ -0.32
TNFRSF11B-201ENST00000297350 CFAP65Q6ZU64 1925 aaKnown RBP13.07□□□□□ -0.32
TNFRSF11B-201ENST00000297350 BACH2Q9BYV9 841 aa13.07□□□□□ -0.32
TNFRSF11B-201ENST00000297350 SLC52A1Q9NWF4 448 aa13.07□□□□□ -0.32
TNFRSF11B-201ENST00000297350 CGNL1Q0VF96 1302 aa13.07□□□□□ -0.32
TNFRSF11B-201ENST00000297350 EVC2Q86UK5 1308 aa13.07□□□□□ -0.32
TNFRSF11B-201ENST00000297350 KDM2BQ8NHM5 1336 aa13.07□□□□□ -0.32
TNFRSF11B-201ENST00000297350 AAMPQ13685 434 aa13.07□□□□□ -0.32
TNFRSF11B-201ENST00000297350 ANKRD36BQ8N2N9 1353 aa13.06□□□□□ -0.32
TNFRSF11B-201ENST00000297350 PDE4AP27815 886 aa13.06□□□□□ -0.32
TNFRSF11B-201ENST00000297350 MYO5BQ9ULV0 1848 aa13.06□□□□□ -0.32
TNFRSF11B-201ENST00000297350 IQSEC2Q5JU85 1478 aa13.06□□□□□ -0.32
TNFRSF11B-201ENST00000297350 ZBTB47Q9UFB7 747 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF11B-201ENST00000297350 TULP4Q9NRJ4 1543 aa13.05□□□□□ -0.32
TNFRSF11B-201ENST00000297350 CHGAP10645 457 aaKnown RBP13.04□□□□□ -0.32
TNFRSF11B-201ENST00000297350 CFAP53Q96M91 514 aa13.04□□□□□ -0.32
TNFRSF11B-201ENST00000297350 MORC1Q86VD1 984 aa13.04□□□□□ -0.32
TNFRSF11B-201ENST00000297350 ANKRD26Q9UPS8 1709 aa13.04□□□□□ -0.32
TNFRSF11B-201ENST00000297350 MED14O60244 1454 aa13.03□□□□□ -0.32
TNFRSF11B-201ENST00000297350 APAF1O14727 1248 aa13.03□□□□□ -0.32
TNFRSF11B-201ENST00000297350 PLIN1O60240 522 aa13.03□□□□□ -0.32
TNFRSF11B-201ENST00000297350 PDE3AQ14432 1141 aa13.03□□□□□ -0.32
TNFRSF11B-201ENST00000297350 CCDC27Q2M243 656 aa13.03□□□□□ -0.32
TNFRSF11B-201ENST00000297350 DDRGK1Q96HY6 314 aa13.03□□□□□ -0.32
TNFRSF11B-201ENST00000297350 TRAK1Q9UPV9 953 aa13.02□□□□□ -0.32
TNFRSF11B-201ENST00000297350 RUNDC1Q96C34 613 aa13.02□□□□□ -0.33
TNFRSF11B-201ENST00000297350 BCL11AQ9H165 835 aa13.02□□□□□ -0.33
TNFRSF11B-201ENST00000297350 ADGRB2O60241 1585 aa13.01□□□□□ -0.33
TNFRSF11B-201ENST00000297350 WDR63Q8IWG1 891 aa13.01□□□□□ -0.33
TNFRSF11B-201ENST00000297350 ATAD2Q6PL18 1390 aa13.01□□□□□ -0.33
TNFRSF11B-201ENST00000297350 PHF23Q9BUL5 403 aaPredicted RBP13□□□□□ -0.33
TNFRSF11B-201ENST00000297350 CCDC146Q8IYE0 955 aa13□□□□□ -0.33
TNFRSF11B-201ENST00000297350 ABCC11Q96J66 1382 aa12.99□□□□□ -0.33
TNFRSF11B-201ENST00000297350 WWC1Q8IX03 1113 aa12.99□□□□□ -0.33
TNFRSF11B-201ENST00000297350 ZMYM3Q14202 1370 aa12.98□□□□□ -0.33
TNFRSF11B-201ENST00000297350 C20orf194Q5TEA3 1177 aa12.98□□□□□ -0.33
TNFRSF11B-201ENST00000297350 VIRMAQ69YN4 1812 aaKnown RBP12.98□□□□□ -0.33
TNFRSF11B-201ENST00000297350 DLC1Q96QB1 1528 aa12.97□□□□□ -0.33
TNFRSF11B-201ENST00000297350 PTPRMP28827 1452 aa12.97□□□□□ -0.33
TNFRSF11B-201ENST00000297350 CT47B1P0C2W7 299 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF11B-201ENST00000297350 SLC12A5Q9H2X9 1139 aa12.97□□□□□ -0.33
TNFRSF11B-201ENST00000297350 PAK3O75914 559 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF11B-201ENST00000297350 SETD1AO15047 1707 aaKnown RBP12.96□□□□□ -0.34
TNFRSF11B-201ENST00000297350 FAM161AQ3B820 660 aa12.96□□□□□ -0.34
TNFRSF11B-201ENST00000297350 USP35Q9P2H5 1018 aa12.96□□□□□ -0.34
TNFRSF11B-201ENST00000297350 TMEM132EQ6IEE7 984 aa12.95□□□□□ -0.34
TNFRSF11B-201ENST00000297350 IDI1Q13907 227 aa12.94□□□□□ -0.34
TNFRSF11B-201ENST00000297350 MYH16Q9H6N6 1097 aa12.94□□□□□ -0.34
TNFRSF11B-201ENST00000297350 YTHDC2Q9H6S0 1430 aaKnown RBP12.94□□□□□ -0.34
TNFRSF11B-201ENST00000297350 TERF2IPQ9NYB0 399 aa12.94□□□□□ -0.34
TNFRSF11B-201ENST00000297350 KIF20BQ96Q89 1820 aa12.94□□□□□ -0.34
TNFRSF11B-201ENST00000297350 MAPK8IP3Q9UPT6 1336 aa12.94□□□□□ -0.34
TNFRSF11B-201ENST00000297350 A2ML1A8K2U0 1454 aa12.93□□□□□ -0.34
TNFRSF11B-201ENST00000297350 PPM1GO15355 546 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF11B-201ENST00000297350 RTL5Q5HYW3 569 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF11B-201ENST00000297350 SPINK5Q9NQ38 1064 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF11B-201ENST00000297350 ALKQ9UM73 1620 aa12.93□□□□□ -0.34
TNFRSF11B-201ENST00000297350 MTHFSP49914 203 aa12.93□□□□□ -0.34
TNFRSF11B-201ENST00000297350 TCP11L2Q8N4U5 519 aa12.93□□□□□ -0.34
TNFRSF11B-201ENST00000297350 CDC42BPGQ6DT37 1551 aa12.93□□□□□ -0.34
TNFRSF11B-201ENST00000297350 PNNQ9H307 717 aaKnown RBP12.92□□□□□ -0.34
TNFRSF11B-201ENST00000297350 COL3A1P02461 1466 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF11B-201ENST00000297350 A0A1W2PP64 1363 aa12.92□□□□□ -0.34
TNFRSF11B-201ENST00000297350 CANXP27824 592 aaKnown RBP12.91□□□□□ -0.34
TNFRSF11B-201ENST00000297350 CLUAP1Q96AJ1 413 aa12.91□□□□□ -0.34
TNFRSF11B-201ENST00000297350 ATP7BP35670 1465 aa12.91□□□□□ -0.34
TNFRSF11B-201ENST00000297350 IL16Q14005 1332 aa12.91□□□□□ -0.34
TNFRSF11B-201ENST00000297350 UBR1Q8IWV7 1749 aa12.91□□□□□ -0.34
TNFRSF11B-201ENST00000297350 PMFBP1Q8TBY8 1022 aa12.9□□□□□ -0.34
TNFRSF11B-201ENST00000297350 NLRP1Q9C000 1473 aa12.9□□□□□ -0.34
TNFRSF11B-201ENST00000297350 KNDC1Q76NI1 1749 aa12.9□□□□□ -0.34
TNFRSF11B-201ENST00000297350 BCAR3O75815 825 aa12.9□□□□□ -0.34
TNFRSF11B-201ENST00000297350 RARSP54136 660 aaKnown RBP12.9□□□□□ -0.34
TNFRSF11B-201ENST00000297350 NRXN3Q9Y4C0 1643 aa12.9□□□□□ -0.35
TNFRSF11B-201ENST00000297350 FER1L4A9Z1Z3 1794 aa12.89□□□□□ -0.35
TNFRSF11B-201ENST00000297350 NPM2Q86SE8 214 aaKnown RBP12.89□□□□□ -0.35
TNFRSF11B-201ENST00000297350 CD163L1Q9NR16 1453 aa12.88□□□□□ -0.35
TNFRSF11B-201ENST00000297350 HDGFL2Q7Z4V5 671 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF11B-201ENST00000297350 DMRT2Q9Y5R5 561 aa12.88□□□□□ -0.35
TNFRSF11B-201ENST00000297350 SRPK2P78362 688 aaKnown RBP12.88□□□□□ -0.35
TNFRSF11B-201ENST00000297350 C3P01024 1663 aa12.87□□□□□ -0.35
TNFRSF11B-201ENST00000297350 C8orf34Q49A92 452 aa12.87□□□□□ -0.35
TNFRSF11B-201ENST00000297350 PNPLA6Q8IY17 1366 aa12.87□□□□□ -0.35
TNFRSF11B-201ENST00000297350 CABP2Q9NPB3 220 aa12.87□□□□□ -0.35
TNFRSF11B-201ENST00000297350 FBXO31Q5XUX0 539 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF11B-201ENST00000297350 RIMS2Q9UQ26 1411 aa12.86□□□□□ -0.35
TNFRSF11B-201ENST00000297350 U2AF1L5P0DN76 240 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF11B-201ENST00000297350 U2AF1Q01081 240 aaKnown RBP eCLIP12.86□□□□□ -0.35
TNFRSF11B-201ENST00000297350 DEKP35659 375 aaKnown RBP12.86□□□□□ -0.35
TNFRSF11B-201ENST00000297350 TNNT2P45379 298 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms