RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 VGFO15240 615 aaPredicted RBP16.18■□□□□ 0.18
CAGE1-201ENST00000296742 NRXN1Q9ULB1 1477 aa16.18■□□□□ 0.18
CAGE1-201ENST00000296742 WDR43Q15061 677 aaKnown RBP eCLIP16.18■□□□□ 0.18
CAGE1-201ENST00000296742 PKNOX2Q96KN3 472 aa16.16■□□□□ 0.18
CAGE1-201ENST00000296742 CABP2Q9NPB3 220 aa16.16■□□□□ 0.18
CAGE1-201ENST00000296742 MYOM1P52179 1685 aa16.16■□□□□ 0.18
CAGE1-201ENST00000296742 DIP2BQ9P265 1576 aa16.16■□□□□ 0.18
CAGE1-201ENST00000296742 KIAA1210Q9ULL0 1709 aa16.16■□□□□ 0.18
CAGE1-201ENST00000296742 PPLO60437 1756 aa16.16■□□□□ 0.18
CAGE1-201ENST00000296742 NEURL4Q96JN8 1562 aa16.15■□□□□ 0.18
CAGE1-201ENST00000296742 PDE3BQ13370 1112 aa16.15■□□□□ 0.18
CAGE1-201ENST00000296742 RPGRIP1LQ68CZ1 1315 aa16.15■□□□□ 0.18
CAGE1-201ENST00000296742 ASXL1Q8IXJ9 1541 aa16.15■□□□□ 0.18
CAGE1-201ENST00000296742 KDM5AP29375 1690 aaKnown RBP16.14■□□□□ 0.17
CAGE1-201ENST00000296742 SLC52A1Q9NWF4 448 aa16.14■□□□□ 0.17
CAGE1-201ENST00000296742 C20orf194Q5TEA3 1177 aa16.13■□□□□ 0.17
CAGE1-201ENST00000296742 FAM161AQ3B820 660 aa16.13■□□□□ 0.17
CAGE1-201ENST00000296742 ADGRB1O14514 1584 aa16.12■□□□□ 0.17
CAGE1-201ENST00000296742 GLI2P10070 1586 aa16.12■□□□□ 0.17
CAGE1-201ENST00000296742 RGS3P49796 1198 aa16.11■□□□□ 0.17
CAGE1-201ENST00000296742 MINK1Q8N4C8 1332 aaPredicted RBP16.11■□□□□ 0.17
CAGE1-201ENST00000296742 MYO5BQ9ULV0 1848 aa16.11■□□□□ 0.17
CAGE1-201ENST00000296742 C8orf34Q49A92 452 aa16.1■□□□□ 0.17
CAGE1-201ENST00000296742 PLPPR3Q6T4P5 718 aa16.1■□□□□ 0.17
CAGE1-201ENST00000296742 NEXMIFQ5QGS0 1516 aa16.1■□□□□ 0.17
CAGE1-201ENST00000296742 NSD3Q9BZ95 1437 aa16.1■□□□□ 0.17
CAGE1-201ENST00000296742 SRPK2P78362 688 aaKnown RBP16.09■□□□□ 0.17
CAGE1-201ENST00000296742 ARXQ96QS3 562 aa16.09■□□□□ 0.17
CAGE1-201ENST00000296742 POGKQ9P215 609 aa16.09■□□□□ 0.17
CAGE1-201ENST00000296742 ARHGAP31Q2M1Z3 1444 aa16.09■□□□□ 0.17
CAGE1-201ENST00000296742 MORC1Q86VD1 984 aa16.09■□□□□ 0.17
CAGE1-201ENST00000296742 RRAGDQ9NQL2 400 aaPredicted RBP16.09■□□□□ 0.17
CAGE1-201ENST00000296742 PIK3C2BO00750 1634 aa16.09■□□□□ 0.17
CAGE1-201ENST00000296742 PRAM1Q96QH2 718 aa16.09■□□□□ 0.17
CAGE1-201ENST00000296742 PLEKHH1Q9ULM0 1364 aa16.08■□□□□ 0.17
CAGE1-201ENST00000296742 BLMP54132 1417 aaPredicted RBP16.08■□□□□ 0.16
CAGE1-201ENST00000296742 APAF1O14727 1248 aa16.08■□□□□ 0.16
CAGE1-201ENST00000296742 SLC24A1O60721 1099 aa16.08■□□□□ 0.16
CAGE1-201ENST00000296742 QRICH2Q9H0J4 1663 aa16.07■□□□□ 0.16
CAGE1-201ENST00000296742 KDM2BQ8NHM5 1336 aa16.07■□□□□ 0.16
CAGE1-201ENST00000296742 GLIPR1L2Q4G1C9 344 aa16.07■□□□□ 0.16
CAGE1-201ENST00000296742 CENPQQ7L2Z9 268 aaPredicted RBP16.07■□□□□ 0.16
CAGE1-201ENST00000296742 SETBP1Q9Y6X0 1596 aa16.06■□□□□ 0.16
CAGE1-201ENST00000296742 EVC2Q86UK5 1308 aa16.06■□□□□ 0.16
CAGE1-201ENST00000296742 NEUROD2Q15784 382 aa16.06■□□□□ 0.16
CAGE1-201ENST00000296742 SBNO2Q9Y2G9 1366 aa16.06■□□□□ 0.16
CAGE1-201ENST00000296742 PREX1Q8TCU6 1659 aa16.05■□□□□ 0.16
CAGE1-201ENST00000296742 WAPLQ7Z5K2 1190 aa16.04■□□□□ 0.16
CAGE1-201ENST00000296742 ESF1Q9H501 851 aaKnown RBP16.04■□□□□ 0.16
CAGE1-201ENST00000296742 VSIG10Q8N0Z9 540 aa16.04■□□□□ 0.16
CAGE1-201ENST00000296742 SPINK5Q9NQ38 1064 aaPredicted RBP16.04■□□□□ 0.16
CAGE1-201ENST00000296742 NAP1L5Q96NT1 182 aaPredicted RBP16.03■□□□□ 0.16
CAGE1-201ENST00000296742 SLKQ9H2G2 1235 aaPredicted RBP16.03■□□□□ 0.16
CAGE1-201ENST00000296742 RRP7AQ9Y3A4 280 aaKnown RBP16.03■□□□□ 0.16
CAGE1-201ENST00000296742 ZMYM4Q5VZL5 1548 aa16.03■□□□□ 0.16
CAGE1-201ENST00000296742 MYO3AQ8NEV4 1616 aa16.02■□□□□ 0.16
CAGE1-201ENST00000296742 TMEM131LA2VDJ0 1609 aa16.02■□□□□ 0.16
CAGE1-201ENST00000296742 NPC1L1Q9UHC9 1359 aa16.02■□□□□ 0.16
CAGE1-201ENST00000296742 MTHFSP49914 203 aa16.02■□□□□ 0.15
CAGE1-201ENST00000296742 DMRT2Q9Y5R5 561 aa16.02■□□□□ 0.15
CAGE1-201ENST00000296742 ZC3H13Q5T200 1668 aaKnown RBP16.02■□□□□ 0.15
CAGE1-201ENST00000296742 GGNBP2Q9H3C7 697 aa16.01■□□□□ 0.15
CAGE1-201ENST00000296742 CLTCQ00610 1675 aaKnown RBP16.01■□□□□ 0.15
CAGE1-201ENST00000296742 TULP4Q9NRJ4 1543 aa16.01■□□□□ 0.15
CAGE1-201ENST00000296742 CGNL1Q0VF96 1302 aa16■□□□□ 0.15
CAGE1-201ENST00000296742 GOLGA2Q08379 1002 aa16■□□□□ 0.15
CAGE1-201ENST00000296742 ARHGEF28Q8N1W1 1705 aaKnown RBP15.99■□□□□ 0.15
CAGE1-201ENST00000296742 DUSP27Q5VZP5 1158 aa15.99■□□□□ 0.15
CAGE1-201ENST00000296742 ZMYND15Q9H091 742 aa15.99■□□□□ 0.15
CAGE1-201ENST00000296742 L1TD1Q5T7N2 865 aaKnown RBP15.98■□□□□ 0.15
CAGE1-201ENST00000296742 YTHDC2Q9H6S0 1430 aaKnown RBP15.98■□□□□ 0.15
CAGE1-201ENST00000296742 FBLN1P23142 703 aa15.98■□□□□ 0.15
CAGE1-201ENST00000296742 CEBPAP49715 358 aaPredicted RBP15.98■□□□□ 0.15
CAGE1-201ENST00000296742 CDK19Q9BWU1 502 aa15.97■□□□□ 0.15
CAGE1-201ENST00000296742 KIF13AQ9H1H9 1805 aa15.96■□□□□ 0.15
CAGE1-201ENST00000296742 CABP1Q9NZU7 370 aa15.96■□□□□ 0.15
CAGE1-201ENST00000296742 A0A1W2PP64 1363 aa15.96■□□□□ 0.15
CAGE1-201ENST00000296742 ZMYM3Q14202 1370 aa15.96■□□□□ 0.15
CAGE1-201ENST00000296742 PNNQ9H307 717 aaKnown RBP15.96■□□□□ 0.15
CAGE1-201ENST00000296742 ZNF521Q96K83 1311 aa15.96■□□□□ 0.14
CAGE1-201ENST00000296742 ZFYVE9O95405 1425 aa15.95■□□□□ 0.14
CAGE1-201ENST00000296742 TXNDC2Q86VQ3 553 aa15.95■□□□□ 0.14
CAGE1-201ENST00000296742 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.95■□□□□ 0.14
CAGE1-201ENST00000296742 HSP90AA2PQ14568 343 aaPredicted RBP15.95■□□□□ 0.14
CAGE1-201ENST00000296742 ANKRD36BQ8N2N9 1353 aa15.94■□□□□ 0.14
CAGE1-201ENST00000296742 A2ML1A8K2U0 1454 aa15.94■□□□□ 0.14
CAGE1-201ENST00000296742 PTPRMP28827 1452 aa15.94■□□□□ 0.14
CAGE1-201ENST00000296742 ALKQ9UM73 1620 aa15.94■□□□□ 0.14
CAGE1-201ENST00000296742 RIMS2Q9UQ26 1411 aa15.93■□□□□ 0.14
CAGE1-201ENST00000296742 NCKAP5LQ9HCH0 1330 aa15.93■□□□□ 0.14
CAGE1-201ENST00000296742 SLFN5Q08AF3 891 aa15.93■□□□□ 0.14
CAGE1-201ENST00000296742 BECN1Q14457 450 aa15.93■□□□□ 0.14
CAGE1-201ENST00000296742 INSRP06213 1382 aa15.92■□□□□ 0.14
CAGE1-201ENST00000296742 U2AF1L5P0DN76 240 aaPredicted RBP15.92■□□□□ 0.14
CAGE1-201ENST00000296742 U2AF1Q01081 240 aaKnown RBP eCLIP15.92■□□□□ 0.14
CAGE1-201ENST00000296742 HSP90AA1P07900 732 aaKnown RBP15.92■□□□□ 0.14
CAGE1-201ENST00000296742 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.92■□□□□ 0.14
CAGE1-201ENST00000296742 GZF1Q9H116 711 aaPredicted RBP15.91■□□□□ 0.14
CAGE1-201ENST00000296742 PPP6R1Q9UPN7 881 aa15.91■□□□□ 0.14
CAGE1-201ENST00000296742 POLR3AO14802 1390 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms