RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 ZCCHC11Q5TAX3 1644 aaKnown RBP13.04□□□□□ -0.32
CCDC36-201ENST00000296449 TNNQ9UQP3 1299 aa13.04□□□□□ -0.32
CCDC36-201ENST00000296449 UGGT1Q9NYU2 1555 aa13.03□□□□□ -0.32
CCDC36-201ENST00000296449 KANK1Q14678 1352 aa13.03□□□□□ -0.32
CCDC36-201ENST00000296449 IQSEC2Q5JU85 1478 aa13.03□□□□□ -0.32
CCDC36-201ENST00000296449 RUNDC1Q96C34 613 aa13.03□□□□□ -0.32
CCDC36-201ENST00000296449 TBC1D32Q96NH3 1257 aa13.03□□□□□ -0.32
CCDC36-201ENST00000296449 ARAP3Q8WWN8 1544 aa13.03□□□□□ -0.32
CCDC36-201ENST00000296449 TCP11L2Q8N4U5 519 aa13.03□□□□□ -0.32
CCDC36-201ENST00000296449 PDZRN3Q9UPQ7 1066 aa13.02□□□□□ -0.32
CCDC36-201ENST00000296449 MORC1Q86VD1 984 aa13.02□□□□□ -0.33
CCDC36-201ENST00000296449 NSD3Q9BZ95 1437 aa13.02□□□□□ -0.33
CCDC36-201ENST00000296449 UPF2Q9HAU5 1272 aaKnown RBP13.01□□□□□ -0.33
CCDC36-201ENST00000296449 IFT172Q9UG01 1749 aa13.01□□□□□ -0.33
CCDC36-201ENST00000296449 TNNT2P45379 298 aaPredicted RBP13.01□□□□□ -0.33
CCDC36-201ENST00000296449 WDR63Q8IWG1 891 aa13.01□□□□□ -0.33
CCDC36-201ENST00000296449 BCL2L13Q9BXK5 485 aa13.01□□□□□ -0.33
CCDC36-201ENST00000296449 TBC1D2Q9BYX2 928 aa13.01□□□□□ -0.33
CCDC36-201ENST00000296449 KIF3BO15066 747 aa13□□□□□ -0.33
CCDC36-201ENST00000296449 NRXN1Q9ULB1 1477 aa12.99□□□□□ -0.33
CCDC36-201ENST00000296449 ATP7AQ04656 1500 aa12.99□□□□□ -0.33
CCDC36-201ENST00000296449 NCBP3Q53F19 620 aaKnown RBP12.99□□□□□ -0.33
CCDC36-201ENST00000296449 RWDD1Q9H446 243 aaPredicted RBP12.99□□□□□ -0.33
CCDC36-201ENST00000296449 INO80Q9ULG1 1556 aaPredicted RBP12.98□□□□□ -0.33
CCDC36-201ENST00000296449 CCDC27Q2M243 656 aa12.98□□□□□ -0.33
CCDC36-201ENST00000296449 KIF1BO60333 1816 aa12.98□□□□□ -0.33
CCDC36-201ENST00000296449 UHRF1BP1LA0JNW5 1464 aa12.98□□□□□ -0.33
CCDC36-201ENST00000296449 MROH1Q8NDA8 1641 aa12.98□□□□□ -0.33
CCDC36-201ENST00000296449 L1TD1Q5T7N2 865 aaKnown RBP12.98□□□□□ -0.33
CCDC36-201ENST00000296449 SLC12A5Q9H2X9 1139 aa12.98□□□□□ -0.33
CCDC36-201ENST00000296449 RSPH6AQ9H0K4 717 aa12.97□□□□□ -0.33
CCDC36-201ENST00000296449 USP32Q8NFA0 1604 aa12.97□□□□□ -0.33
CCDC36-201ENST00000296449 SETBP1Q9Y6X0 1596 aa12.97□□□□□ -0.33
CCDC36-201ENST00000296449 ZNF518AQ6AHZ1 1483 aa12.97□□□□□ -0.33
CCDC36-201ENST00000296449 MROH2AA6NES4 1674 aa12.97□□□□□ -0.33
CCDC36-201ENST00000296449 MTHFSP49914 203 aa12.96□□□□□ -0.33
CCDC36-201ENST00000296449 MVPQ14764 893 aaKnown RBP12.96□□□□□ -0.33
CCDC36-201ENST00000296449 NOS1P29475 1434 aa12.95□□□□□ -0.34
CCDC36-201ENST00000296449 EFCAB6Q5THR3 1501 aa12.95□□□□□ -0.34
CCDC36-201ENST00000296449 MYH16Q9H6N6 1097 aa12.95□□□□□ -0.34
CCDC36-201ENST00000296449 TRAK1Q9UPV9 953 aa12.95□□□□□ -0.34
CCDC36-201ENST00000296449 ZC3H13Q5T200 1668 aaKnown RBP12.95□□□□□ -0.34
CCDC36-201ENST00000296449 RRAGDQ9NQL2 400 aaPredicted RBP12.94□□□□□ -0.34
CCDC36-201ENST00000296449 ZKSCAN2Q63HK3 967 aa12.93□□□□□ -0.34
CCDC36-201ENST00000296449 CFAP53Q96M91 514 aa12.93□□□□□ -0.34
CCDC36-201ENST00000296449 SPRYD3Q8NCJ5 442 aa12.93□□□□□ -0.34
CCDC36-201ENST00000296449 FANCAO15360 1455 aa12.93□□□□□ -0.34
CCDC36-201ENST00000296449 ADGRB3O60242 1522 aa12.93□□□□□ -0.34
CCDC36-201ENST00000296449 QRICH2Q9H0J4 1663 aa12.93□□□□□ -0.34
CCDC36-201ENST00000296449 MCM4P33991 863 aa12.92□□□□□ -0.34
CCDC36-201ENST00000296449 DZIP1LQ8IYY4 767 aaKnown RBP12.92□□□□□ -0.34
CCDC36-201ENST00000296449 ADGRL1O94910 1474 aa12.92□□□□□ -0.34
CCDC36-201ENST00000296449 PPRC1Q5VV67 1664 aaKnown RBP12.92□□□□□ -0.34
CCDC36-201ENST00000296449 ABCA9Q8IUA7 1624 aa12.92□□□□□ -0.34
CCDC36-201ENST00000296449 FSD2A1L4K1 749 aa12.92□□□□□ -0.34
CCDC36-201ENST00000296449 FTSJ3Q8IY81 847 aaKnown RBP12.92□□□□□ -0.34
CCDC36-201ENST00000296449 UBE2Q2Q8WVN8 375 aa12.92□□□□□ -0.34
CCDC36-201ENST00000296449 C22orf23Q9BZE7 217 aa12.92□□□□□ -0.34
CCDC36-201ENST00000296449 XRCC6P12956 609 aaKnown RBP eCLIP12.91□□□□□ -0.34
CCDC36-201ENST00000296449 C14orf93Q9H972 538 aaKnown RBP12.91□□□□□ -0.34
CCDC36-201ENST00000296449 ADGRB1O14514 1584 aa12.91□□□□□ -0.34
CCDC36-201ENST00000296449 ADGRB2O60241 1585 aa12.91□□□□□ -0.34
CCDC36-201ENST00000296449 CT47B1P0C2W7 299 aaPredicted RBP12.91□□□□□ -0.34
CCDC36-201ENST00000296449 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
CCDC36-201ENST00000296449 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.34
CCDC36-201ENST00000296449 GOLGA6L3A6NEY3 463 aa12.9□□□□□ -0.34
CCDC36-201ENST00000296449 MFAP1P55081 439 aaKnown RBP12.9□□□□□ -0.34
CCDC36-201ENST00000296449 LMTK2Q8IWU2 1503 aa12.9□□□□□ -0.34
CCDC36-201ENST00000296449 CHGAP10645 457 aaKnown RBP12.9□□□□□ -0.35
CCDC36-201ENST00000296449 HDAC1Q13547 482 aaPredicted RBP12.9□□□□□ -0.35
CCDC36-201ENST00000296449 TMEM132EQ6IEE7 984 aa12.9□□□□□ -0.35
CCDC36-201ENST00000296449 TSR2Q969E8 191 aaKnown RBP12.9□□□□□ -0.35
CCDC36-201ENST00000296449 CHMP5Q9NZZ3 219 aa12.9□□□□□ -0.35
CCDC36-201ENST00000296449 TRIM27P14373 513 aa12.89□□□□□ -0.35
CCDC36-201ENST00000296449 ARXQ96QS3 562 aa12.89□□□□□ -0.35
CCDC36-201ENST00000296449 SMC4Q9NTJ3 1288 aa12.89□□□□□ -0.35
CCDC36-201ENST00000296449 NSD2O96028 1365 aa12.88□□□□□ -0.35
CCDC36-201ENST00000296449 GZF1Q9H116 711 aaPredicted RBP12.88□□□□□ -0.35
CCDC36-201ENST00000296449 EXOSC9Q06265 439 aaKnown RBP12.88□□□□□ -0.35
CCDC36-201ENST00000296449 SSH1Q8WYL5 1049 aa12.87□□□□□ -0.35
CCDC36-201ENST00000296449 PUS7Q96PZ0 661 aaKnown RBP12.87□□□□□ -0.35
CCDC36-201ENST00000296449 PPLO60437 1756 aa12.87□□□□□ -0.35
CCDC36-201ENST00000296449 ANKRD36BQ8N2N9 1353 aa12.87□□□□□ -0.35
CCDC36-201ENST00000296449 SMC5Q8IY18 1101 aa12.87□□□□□ -0.35
CCDC36-201ENST00000296449 PANK2Q9BZ23 570 aa12.87□□□□□ -0.35
CCDC36-201ENST00000296449 DDX19BQ9UMR2 479 aa12.87□□□□□ -0.35
CCDC36-201ENST00000296449 TRAK2O60296 914 aa12.86□□□□□ -0.35
CCDC36-201ENST00000296449 ITPRIPQ8IWB1 547 aa12.86□□□□□ -0.35
CCDC36-201ENST00000296449 CD109Q6YHK3 1445 aa12.86□□□□□ -0.35
CCDC36-201ENST00000296449 ATF7IPQ6VMQ6 1270 aa12.86□□□□□ -0.35
CCDC36-201ENST00000296449 ZNF692Q9BU19 519 aaPredicted RBP12.86□□□□□ -0.35
CCDC36-201ENST00000296449 PLEKHF1Q96S99 279 aa12.85□□□□□ -0.35
CCDC36-201ENST00000296449 TULP4Q9NRJ4 1543 aa12.85□□□□□ -0.35
CCDC36-201ENST00000296449 TRIM35Q9UPQ4 493 aa12.85□□□□□ -0.35
CCDC36-201ENST00000296449 KIDINS220Q9ULH0 1771 aa12.85□□□□□ -0.35
CCDC36-201ENST00000296449 EVC2Q86UK5 1308 aa12.84□□□□□ -0.35
CCDC36-201ENST00000296449 TMPOP42166 694 aaKnown RBP12.84□□□□□ -0.35
CCDC36-201ENST00000296449 NPATQ14207 1427 aa12.84□□□□□ -0.35
CCDC36-201ENST00000296449 NCOA3Q9Y6Q9 1424 aa12.84□□□□□ -0.35
CCDC36-201ENST00000296449 HSCBQ8IWL3 235 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms