RNA–Protein interactions for RNA: ENST00000296210.11

TPRA1-201, Transcript of transmembrane protein adipocyte associated 1, humanhuman

TSL 1 (best) BASIC

Gene TPRA1, Length 1,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRA1-201ENST00000296210 AEBP2Q6ZN18 517 aaPredicted RBP36.81■■■■□ 3.48
TPRA1-201ENST00000296210 SBNO2Q9Y2G9 1366 aa36.8■■■■□ 3.48
TPRA1-201ENST00000296210 FAM135BQ49AJ0 1406 aa36.8■■■■□ 3.48
TPRA1-201ENST00000296210 DISP3Q9P2K9 1392 aa36.78■■■■□ 3.48
TPRA1-201ENST00000296210 KNDC1Q76NI1 1749 aa36.77■■■■□ 3.48
TPRA1-201ENST00000296210 KCNA6P17658 529 aa36.76■■■■□ 3.47
TPRA1-201ENST00000296210 HNRNPUQ00839 825 aaKnown RBP eCLIP36.76■■■■□ 3.47
TPRA1-201ENST00000296210 DMRT2Q9Y5R5 561 aa36.76■■■■□ 3.47
TPRA1-201ENST00000296210 KTN1Q86UP2 1357 aaKnown RBP36.76■■■■□ 3.47
TPRA1-201ENST00000296210 ROBO2Q9HCK4 1378 aa36.76■■■■□ 3.47
TPRA1-201ENST00000296210 CPS1P31327 1500 aa36.76■■■■□ 3.47
TPRA1-201ENST00000296210 QRICH2Q9H0J4 1663 aa36.76■■■■□ 3.47
TPRA1-201ENST00000296210 MINK1Q8N4C8 1332 aaPredicted RBP36.75■■■■□ 3.47
TPRA1-201ENST00000296210 PLEKHH1Q9ULM0 1364 aa36.73■■■■□ 3.47
TPRA1-201ENST00000296210 EVC2Q86UK5 1308 aa36.73■■■■□ 3.47
TPRA1-201ENST00000296210 PTCH1Q13635 1447 aa36.72■■■■□ 3.47
TPRA1-201ENST00000296210 STRCQ7RTU9 1775 aa36.71■■■■□ 3.47
TPRA1-201ENST00000296210 SUPT16HQ9Y5B9 1047 aaKnown RBP36.71■■■■□ 3.47
TPRA1-201ENST00000296210 XRN1Q8IZH2 1706 aaKnown RBP36.67■■■■□ 3.46
TPRA1-201ENST00000296210 CHD2O14647 1828 aaKnown RBP36.67■■■■□ 3.46
TPRA1-201ENST00000296210 SRPK2P78362 688 aaKnown RBP36.62■■■■□ 3.45
TPRA1-201ENST00000296210 FAM9BQ8IZU0 186 aa36.62■■■■□ 3.45
TPRA1-201ENST00000296210 RALBP1Q15311 655 aa36.62■■■■□ 3.45
TPRA1-201ENST00000296210 PROSER2Q86WR7 435 aaPredicted RBP36.59■■■■□ 3.45
TPRA1-201ENST00000296210 CDK19Q9BWU1 502 aa36.59■■■■□ 3.45
TPRA1-201ENST00000296210 PUS7Q96PZ0 661 aaKnown RBP36.58■■■■□ 3.45
TPRA1-201ENST00000296210 PER1O15534 1290 aaPredicted RBP36.57■■■■□ 3.45
TPRA1-201ENST00000296210 PARD3Q8TEW0 1356 aa36.57■■■■□ 3.45
TPRA1-201ENST00000296210 NWD1Q149M9 1564 aa36.56■■■■□ 3.44
TPRA1-201ENST00000296210 MYBBP1AQ9BQG0 1328 aaKnown RBP36.56■■■■□ 3.44
TPRA1-201ENST00000296210 CABP2Q9NPB3 220 aa36.56■■■■□ 3.44
TPRA1-201ENST00000296210 WASLO00401 505 aaPredicted RBP36.56■■■■□ 3.44
TPRA1-201ENST00000296210 TULP4Q9NRJ4 1543 aa36.55■■■■□ 3.44
TPRA1-201ENST00000296210 C14orf37Q86TY3 774 aa36.55■■■■□ 3.44
TPRA1-201ENST00000296210 BRD4O60885 1362 aaPredicted RBP36.54■■■■□ 3.44
TPRA1-201ENST00000296210 ZBED9Q6R2W3 1325 aa36.54■■■■□ 3.44
TPRA1-201ENST00000296210 NKTRP30414 1462 aaKnown RBP36.53■■■■□ 3.44
TPRA1-201ENST00000296210 CNGB1Q14028 1251 aaPredicted RBP36.5■■■■□ 3.43
TPRA1-201ENST00000296210 TMC1Q8TDI8 760 aa36.5■■■■□ 3.43
TPRA1-201ENST00000296210 RBM33Q96EV2 1170 aaKnown RBP36.5■■■■□ 3.43
TPRA1-201ENST00000296210 MYOM1P52179 1685 aa36.49■■■■□ 3.43
TPRA1-201ENST00000296210 ATAD2Q6PL18 1390 aa36.48■■■■□ 3.43
TPRA1-201ENST00000296210 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.48■■■■□ 3.43
TPRA1-201ENST00000296210 ZNF335Q9H4Z2 1342 aaPredicted RBP36.46■■■■□ 3.43
TPRA1-201ENST00000296210 PANK3Q9H999 370 aa36.45■■■■□ 3.43
TPRA1-201ENST00000296210 PNISRQ8TF01 805 aaKnown RBP36.45■■■■□ 3.43
TPRA1-201ENST00000296210 ADGRB2O60241 1585 aa36.44■■■■□ 3.42
TPRA1-201ENST00000296210 ADGRL3Q9HAR2 1447 aa36.4■■■■□ 3.42
TPRA1-201ENST00000296210 NUDT16Q96DE0 195 aaKnown RBP36.39■■■■□ 3.42
TPRA1-201ENST00000296210 TMEM94Q12767 1356 aa36.39■■■■□ 3.42
TPRA1-201ENST00000296210 NEFLP07196 543 aa36.39■■■■□ 3.42
TPRA1-201ENST00000296210 NINLQ9Y2I6 1382 aa36.39■■■■□ 3.42
TPRA1-201ENST00000296210 NLRP13Q86W25 1043 aa36.38■■■■□ 3.41
TPRA1-201ENST00000296210 SLC12A5Q9H2X9 1139 aa36.38■■■■□ 3.41
TPRA1-201ENST00000296210 FKBP8Q14318 412 aa36.37■■■■□ 3.41
TPRA1-201ENST00000296210 NCOA3Q9Y6Q9 1424 aa36.37■■■■□ 3.41
TPRA1-201ENST00000296210 NUTM2FA1L443 756 aa36.36■■■■□ 3.41
TPRA1-201ENST00000296210 STRCP1A6NGW2 1772 aa36.36■■■■□ 3.41
TPRA1-201ENST00000296210 C19orf44Q9H6X5 657 aa36.35■■■■□ 3.41
TPRA1-201ENST00000296210 CCDC61Q9Y6R9 512 aa36.35■■■■□ 3.41
TPRA1-201ENST00000296210 CABP1Q9NZU7 370 aa36.33■■■■□ 3.41
TPRA1-201ENST00000296210 TERF2IPQ9NYB0 399 aa36.31■■■■□ 3.4
TPRA1-201ENST00000296210 NALCNQ8IZF0 1738 aa36.3■■■■□ 3.4
TPRA1-201ENST00000296210 CDC42BPGQ6DT37 1551 aa36.29■■■■□ 3.4
TPRA1-201ENST00000296210 ATF3P18847 181 aa36.28■■■■□ 3.4
TPRA1-201ENST00000296210 KNSTRNQ9Y448 316 aa36.28■■■■□ 3.4
TPRA1-201ENST00000296210 PRR36Q9H6K5 1346 aa36.28■■■■□ 3.4
TPRA1-201ENST00000296210 HDGFL2Q7Z4V5 671 aaPredicted RBP36.28■■■■□ 3.4
TPRA1-201ENST00000296210 PPIP5K1Q6PFW1 1433 aa36.27■■■■□ 3.4
TPRA1-201ENST00000296210 MSH6P52701 1360 aa36.26■■■■□ 3.4
TPRA1-201ENST00000296210 LRRC7Q96NW7 1537 aa36.26■■■■□ 3.4
TPRA1-201ENST00000296210 ATP7BP35670 1465 aa36.26■■■■□ 3.39
TPRA1-201ENST00000296210 CC2D1BQ5T0F9 858 aaKnown RBP36.25■■■■□ 3.39
TPRA1-201ENST00000296210 ANKARQ7Z5J8 1434 aa36.25■■■■□ 3.39
TPRA1-201ENST00000296210 ANKRD36BQ8N2N9 1353 aa36.24■■■■□ 3.39
TPRA1-201ENST00000296210 NPC1L1Q9UHC9 1359 aa36.24■■■■□ 3.39
TPRA1-201ENST00000296210 CADPS2Q86UW7 1296 aa36.21■■■■□ 3.39
TPRA1-201ENST00000296210 INSRP06213 1382 aa36.21■■■■□ 3.39
TPRA1-201ENST00000296210 SMG6Q86US8 1419 aaKnown RBP36.2■■■■□ 3.39
TPRA1-201ENST00000296210 FMN2Q9NZ56 1722 aa36.2■■■■□ 3.39
TPRA1-201ENST00000296210 AMER1Q5JTC6 1135 aaPredicted RBP36.2■■■■□ 3.38
TPRA1-201ENST00000296210 DCCP43146 1447 aa36.18■■■■□ 3.38
TPRA1-201ENST00000296210 PLEKHG3A1L390 1219 aa36.17■■■■□ 3.38
TPRA1-201ENST00000296210 A0A1W2PP64 1363 aa36.17■■■■□ 3.38
TPRA1-201ENST00000296210 CARD14Q9BXL6 1004 aa36.17■■■■□ 3.38
TPRA1-201ENST00000296210 ZNF692Q9BU19 519 aaPredicted RBP36.15■■■■□ 3.38
TPRA1-201ENST00000296210 NGDNQ8NEJ9 315 aaKnown RBP36.14■■■■□ 3.38
TPRA1-201ENST00000296210 PMFBP1Q8TBY8 1022 aa36.14■■■■□ 3.38
TPRA1-201ENST00000296210 ESCO1Q5FWF5 840 aa36.14■■■■□ 3.38
TPRA1-201ENST00000296210 NSD3Q9BZ95 1437 aa36.13■■■■□ 3.38
TPRA1-201ENST00000296210 USP32Q8NFA0 1604 aa36.12■■■■□ 3.37
TPRA1-201ENST00000296210 ACEP12821 1306 aa36.12■■■■□ 3.37
TPRA1-201ENST00000296210 PELP1Q8IZL8 1130 aaKnown RBP36.11■■■■□ 3.37
TPRA1-201ENST00000296210 ITSN1Q15811 1721 aa36.11■■■■□ 3.37
TPRA1-201ENST00000296210 PHF8Q9UPP1 1060 aa36.1■■■■□ 3.37
TPRA1-201ENST00000296210 CD163L1Q9NR16 1453 aa36.1■■■■□ 3.37
TPRA1-201ENST00000296210 BLMP54132 1417 aaPredicted RBP36.09■■■■□ 3.37
TPRA1-201ENST00000296210 TOPAZ1Q8N9V7 1692 aa36.09■■■■□ 3.37
TPRA1-201ENST00000296210 CGNL1Q0VF96 1302 aa36.08■■■■□ 3.37
TPRA1-201ENST00000296210 CPSF1Q10570 1443 aaKnown RBP36.07■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms