RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 MYO3AQ8NEV4 1616 aa12.53□□□□□ -0.4
CLRN1-201ENST00000295911 SYNMO15061 1565 aa12.53□□□□□ -0.4
CLRN1-201ENST00000295911 PER1O15534 1290 aaPredicted RBP12.53□□□□□ -0.4
CLRN1-201ENST00000295911 LHX8Q68G74 356 aa12.53□□□□□ -0.4
CLRN1-201ENST00000295911 MS4A3Q96HJ5 214 aa12.53□□□□□ -0.4
CLRN1-201ENST00000295911 SIGLEC1Q9BZZ2 1709 aa12.53□□□□□ -0.4
CLRN1-201ENST00000295911 NOS1P29475 1434 aa12.52□□□□□ -0.41
CLRN1-201ENST00000295911 PARD3Q8TEW0 1356 aa12.52□□□□□ -0.41
CLRN1-201ENST00000295911 FAM69CQ0P6D2 419 aa12.52□□□□□ -0.41
CLRN1-201ENST00000295911 PNISRQ8TF01 805 aaKnown RBP12.52□□□□□ -0.41
CLRN1-201ENST00000295911 REREQ9P2R6 1566 aa12.52□□□□□ -0.41
CLRN1-201ENST00000295911 FBXO3Q9UK99 471 aa12.51□□□□□ -0.41
CLRN1-201ENST00000295911 NLRP13Q86W25 1043 aa12.5□□□□□ -0.41
CLRN1-201ENST00000295911 PANK3Q9H999 370 aa12.5□□□□□ -0.41
CLRN1-201ENST00000295911 ADGRF5Q8IZF2 1346 aa12.49□□□□□ -0.41
CLRN1-201ENST00000295911 PREX1Q8TCU6 1659 aa12.49□□□□□ -0.41
CLRN1-201ENST00000295911 NUBP1P53384 320 aa12.49□□□□□ -0.41
CLRN1-201ENST00000295911 LRPPRCP42704 1394 aaKnown RBP12.49□□□□□ -0.41
CLRN1-201ENST00000295911 MYOM1P52179 1685 aa12.48□□□□□ -0.41
CLRN1-201ENST00000295911 CHGAP10645 457 aaKnown RBP12.48□□□□□ -0.41
CLRN1-201ENST00000295911 CNGB1Q14028 1251 aaPredicted RBP12.48□□□□□ -0.41
CLRN1-201ENST00000295911 CFAP70Q5T0N1 1121 aa12.48□□□□□ -0.41
CLRN1-201ENST00000295911 ERICH6BQ5W0A0 696 aa12.48□□□□□ -0.41
CLRN1-201ENST00000295911 KIF12Q96FN5 646 aa12.48□□□□□ -0.41
CLRN1-201ENST00000295911 ZBTB47Q9UFB7 747 aaPredicted RBP12.48□□□□□ -0.41
CLRN1-201ENST00000295911 YEATS2Q9ULM3 1422 aa12.48□□□□□ -0.41
CLRN1-201ENST00000295911 SBNO2Q9Y2G9 1366 aa12.48□□□□□ -0.41
CLRN1-201ENST00000295911 PIK3C2GO75747 1445 aa12.47□□□□□ -0.41
CLRN1-201ENST00000295911 SLC52A1Q9NWF4 448 aa12.47□□□□□ -0.41
CLRN1-201ENST00000295911 KIF13AQ9H1H9 1805 aa12.47□□□□□ -0.41
CLRN1-201ENST00000295911 AGLP35573 1532 aa12.47□□□□□ -0.41
CLRN1-201ENST00000295911 INSRP06213 1382 aa12.47□□□□□ -0.41
CLRN1-201ENST00000295911 VGFO15240 615 aaPredicted RBP12.46□□□□□ -0.41
CLRN1-201ENST00000295911 MYO5BQ9ULV0 1848 aa12.46□□□□□ -0.42
CLRN1-201ENST00000295911 C14orf93Q9H972 538 aaKnown RBP12.45□□□□□ -0.42
CLRN1-201ENST00000295911 KNSTRNQ9Y448 316 aa12.45□□□□□ -0.42
CLRN1-201ENST00000295911 QRICH2Q9H0J4 1663 aa12.45□□□□□ -0.42
CLRN1-201ENST00000295911 SMG6Q86US8 1419 aaKnown RBP12.45□□□□□ -0.42
CLRN1-201ENST00000295911 NEXMIFQ5QGS0 1516 aa12.45□□□□□ -0.42
CLRN1-201ENST00000295911 NPC1L1Q9UHC9 1359 aa12.45□□□□□ -0.42
CLRN1-201ENST00000295911 ZFYVE9O95405 1425 aa12.44□□□□□ -0.42
CLRN1-201ENST00000295911 ASXL1Q8IXJ9 1541 aa12.44□□□□□ -0.42
CLRN1-201ENST00000295911 ERVK-7P63135 1459 aa12.43□□□□□ -0.42
CLRN1-201ENST00000295911 TMEM131LA2VDJ0 1609 aa12.43□□□□□ -0.42
CLRN1-201ENST00000295911 ADGRB1O14514 1584 aa12.42□□□□□ -0.42
CLRN1-201ENST00000295911 MAP3K13O43283 966 aa12.42□□□□□ -0.42
CLRN1-201ENST00000295911 CC2D1BQ5T0F9 858 aaKnown RBP12.42□□□□□ -0.42
CLRN1-201ENST00000295911 CENPJQ9HC77 1338 aaPredicted RBP12.42□□□□□ -0.42
CLRN1-201ENST00000295911 CLTCQ00610 1675 aaKnown RBP12.4□□□□□ -0.42
CLRN1-201ENST00000295911 VASPP50552 380 aaPredicted RBP12.4□□□□□ -0.42
CLRN1-201ENST00000295911 IDI1Q13907 227 aa12.4□□□□□ -0.42
CLRN1-201ENST00000295911 PUS7Q96PZ0 661 aaKnown RBP12.4□□□□□ -0.42
CLRN1-201ENST00000295911 NUDCQ9Y266 331 aa12.4□□□□□ -0.42
CLRN1-201ENST00000295911 ARHGEF28Q8N1W1 1705 aaKnown RBP12.4□□□□□ -0.42
CLRN1-201ENST00000295911 ATMINO43313 823 aaPredicted RBP12.38□□□□□ -0.43
CLRN1-201ENST00000295911 PDE3BQ13370 1112 aa12.38□□□□□ -0.43
CLRN1-201ENST00000295911 ASTLQ6HA08 431 aaPredicted RBP12.38□□□□□ -0.43
CLRN1-201ENST00000295911 BCANQ96GW7 911 aa12.38□□□□□ -0.43
CLRN1-201ENST00000295911 TRPC6Q9Y210 931 aa12.38□□□□□ -0.43
CLRN1-201ENST00000295911 ARHGEF40Q8TER5 1519 aa12.38□□□□□ -0.43
CLRN1-201ENST00000295911 TRAK1Q9UPV9 953 aa12.37□□□□□ -0.43
CLRN1-201ENST00000295911 BLMP54132 1417 aaPredicted RBP12.36□□□□□ -0.43
CLRN1-201ENST00000295911 PPP2R1AP30153 589 aa12.36□□□□□ -0.43
CLRN1-201ENST00000295911 SPATA31D1Q6ZQQ2 1576 aa12.35□□□□□ -0.43
CLRN1-201ENST00000295911 USP32Q8NFA0 1604 aa12.35□□□□□ -0.43
CLRN1-201ENST00000295911 FAM212AQ96EL1 285 aa12.35□□□□□ -0.43
CLRN1-201ENST00000295911 PPP4R2Q9NY27 417 aa12.35□□□□□ -0.43
CLRN1-201ENST00000295911 EVC2Q86UK5 1308 aa12.34□□□□□ -0.43
CLRN1-201ENST00000295911 TMEM132EQ6IEE7 984 aa12.33□□□□□ -0.44
CLRN1-201ENST00000295911 RNF123Q5XPI4 1314 aa12.33□□□□□ -0.44
CLRN1-201ENST00000295911 WDR43Q15061 677 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLRN1-201ENST00000295911 POTEB2H3BUK9 544 aa12.31□□□□□ -0.44
CLRN1-201ENST00000295911 ATN1P54259 1190 aaPredicted RBP12.31□□□□□ -0.44
CLRN1-201ENST00000295911 KLHL34Q8N239 644 aa12.31□□□□□ -0.44
CLRN1-201ENST00000295911 BMP2KQ9NSY1 1161 aaPredicted RBP12.31□□□□□ -0.44
CLRN1-201ENST00000295911 NINLQ9Y2I6 1382 aa12.3□□□□□ -0.44
CLRN1-201ENST00000295911 DCAF8Q5TAQ9 597 aa12.3□□□□□ -0.44
CLRN1-201ENST00000295911 FBXO31Q5XUX0 539 aaPredicted RBP12.3□□□□□ -0.44
CLRN1-201ENST00000295911 ALKQ9UM73 1620 aa12.3□□□□□ -0.44
CLRN1-201ENST00000295911 CARD14Q9BXL6 1004 aa12.29□□□□□ -0.44
CLRN1-201ENST00000295911 ESF1Q9H501 851 aaKnown RBP12.29□□□□□ -0.44
CLRN1-201ENST00000295911 PCDHB13Q9Y5F0 798 aa12.29□□□□□ -0.44
CLRN1-201ENST00000295911 IRX6P78412 446 aaPredicted RBP12.28□□□□□ -0.44
CLRN1-201ENST00000295911 NUTM2DQ5VT03 806 aaPredicted RBP12.28□□□□□ -0.44
CLRN1-201ENST00000295911 NGEFQ8N5V2 710 aa12.28□□□□□ -0.44
CLRN1-201ENST00000295911 ADAMTS8Q9UP79 889 aa12.28□□□□□ -0.44
CLRN1-201ENST00000295911 TULP4Q9NRJ4 1543 aa12.28□□□□□ -0.44
CLRN1-201ENST00000295911 A2ML1A8K2U0 1454 aa12.27□□□□□ -0.44
CLRN1-201ENST00000295911 YTHDC2Q9H6S0 1430 aaKnown RBP12.27□□□□□ -0.44
CLRN1-201ENST00000295911 SGIP1Q9BQI5 828 aa12.27□□□□□ -0.45
CLRN1-201ENST00000295911 METRNQ9UJH8 293 aa12.27□□□□□ -0.45
CLRN1-201ENST00000295911 PTPRMP28827 1452 aa12.27□□□□□ -0.45
CLRN1-201ENST00000295911 NSD3Q9BZ95 1437 aa12.26□□□□□ -0.45
CLRN1-201ENST00000295911 NSD2O96028 1365 aa12.26□□□□□ -0.45
CLRN1-201ENST00000295911 ANKRD36BQ8N2N9 1353 aa12.26□□□□□ -0.45
CLRN1-201ENST00000295911 DLC1Q96QB1 1528 aa12.26□□□□□ -0.45
CLRN1-201ENST00000295911 TIE1P35590 1138 aa12.26□□□□□ -0.45
CLRN1-201ENST00000295911 HDGFP51858 240 aaKnown RBP12.26□□□□□ -0.45
CLRN1-201ENST00000295911 IFNL1Q8IU54 200 aa12.26□□□□□ -0.45
CLRN1-201ENST00000295911 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms