RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 SLIT2O94813 1529 aa24.35■■□□□ 1.49
UBXN1-201ENST00000294119 PXDNQ92626 1479 aa24.33■■□□□ 1.49
UBXN1-201ENST00000294119 PRAG1Q86YV5 1406 aa24.32■■□□□ 1.48
UBXN1-201ENST00000294119 LOC105371045A0A1W2PR82 267 aa24.31■■□□□ 1.48
UBXN1-201ENST00000294119 UNC5CLQ8IV45 518 aa24.29■■□□□ 1.48
UBXN1-201ENST00000294119 PSDA5PKW4 1024 aaPredicted RBP24.27■■□□□ 1.48
UBXN1-201ENST00000294119 SF3B2Q13435 895 aaKnown RBP24.27■■□□□ 1.48
UBXN1-201ENST00000294119 ROBO2Q9HCK4 1378 aa24.25■■□□□ 1.47
UBXN1-201ENST00000294119 NEXMIFQ5QGS0 1516 aa24.25■■□□□ 1.47
UBXN1-201ENST00000294119 ONECUT3O60422 494 aaPredicted RBP24.24■■□□□ 1.47
UBXN1-201ENST00000294119 NPHP3Q7Z494 1330 aa24.24■■□□□ 1.47
UBXN1-201ENST00000294119 SEPT12Q8IYM1 358 aa24.22■■□□□ 1.47
UBXN1-201ENST00000294119 USP32Q8NFA0 1604 aa24.18■■□□□ 1.46
UBXN1-201ENST00000294119 CDC42BPGQ6DT37 1551 aa24.18■■□□□ 1.46
UBXN1-201ENST00000294119 BAG6P46379 1132 aa24.16■■□□□ 1.46
UBXN1-201ENST00000294119 VPS72Q15906 364 aa24.16■■□□□ 1.46
UBXN1-201ENST00000294119 KRT27Q7Z3Y8 459 aa24.16■■□□□ 1.46
UBXN1-201ENST00000294119 HFM1A2PYH4 1435 aa24.16■■□□□ 1.46
UBXN1-201ENST00000294119 YY1P25490 414 aa24.15■■□□□ 1.46
UBXN1-201ENST00000294119 NWD2Q9ULI1 1742 aa24.13■■□□□ 1.45
UBXN1-201ENST00000294119 DISP2A7MBM2 1401 aa24.13■■□□□ 1.45
UBXN1-201ENST00000294119 FOXO3O43524 673 aa24.12■■□□□ 1.45
UBXN1-201ENST00000294119 ZNF326Q5BKZ1 582 aaKnown RBP24.11■■□□□ 1.45
UBXN1-201ENST00000294119 ESCO1Q5FWF5 840 aa24.11■■□□□ 1.45
UBXN1-201ENST00000294119 XPCQ01831 940 aaPredicted RBP24.1■■□□□ 1.45
UBXN1-201ENST00000294119 NUP155O75694 1391 aa24.1■■□□□ 1.45
UBXN1-201ENST00000294119 PLCH1Q4KWH8 1693 aa24.1■■□□□ 1.45
UBXN1-201ENST00000294119 RGPD1P0DJD0 1748 aa24.1■■□□□ 1.45
UBXN1-201ENST00000294119 SPATA31A3Q5VYP0 1347 aa24.1■■□□□ 1.45
UBXN1-201ENST00000294119 LRPPRCP42704 1394 aaKnown RBP24.09■■□□□ 1.45
UBXN1-201ENST00000294119 R3HDM1Q15032 1099 aaKnown RBP24.09■■□□□ 1.45
UBXN1-201ENST00000294119 ROCK1Q13464 1354 aa24.08■■□□□ 1.45
UBXN1-201ENST00000294119 CLTCL1P53675 1640 aa24.08■■□□□ 1.45
UBXN1-201ENST00000294119 EN1Q05925 392 aaPredicted RBP24.06■■□□□ 1.44
UBXN1-201ENST00000294119 TNS1Q9HBL0 1735 aaKnown RBP24.05■■□□□ 1.44
UBXN1-201ENST00000294119 FAM50AQ14320 339 aaKnown RBP24.03■■□□□ 1.44
UBXN1-201ENST00000294119 ABCA3Q99758 1704 aa24.01■■□□□ 1.43
UBXN1-201ENST00000294119 CCDC144AA2RUR9 1427 aa24.01■■□□□ 1.43
UBXN1-201ENST00000294119 NRAPQ86VF7 1730 aa24■■□□□ 1.43
UBXN1-201ENST00000294119 NAIPQ13075 1403 aa24■■□□□ 1.43
UBXN1-201ENST00000294119 KIF1AQ12756 1690 aa23.99■■□□□ 1.43
UBXN1-201ENST00000294119 UTRNP46939 3433 aa23.98■■□□□ 1.43
UBXN1-201ENST00000294119 KIF1BO60333 1816 aa23.98■■□□□ 1.43
UBXN1-201ENST00000294119 TNS3Q68CZ2 1445 aa23.96■■□□□ 1.43
UBXN1-201ENST00000294119 VGFO15240 615 aaPredicted RBP23.96■■□□□ 1.43
UBXN1-201ENST00000294119 APLP2Q06481 763 aa23.96■■□□□ 1.43
UBXN1-201ENST00000294119 TECPR2O15040 1411 aa23.95■■□□□ 1.42
UBXN1-201ENST00000294119 FMN2Q9NZ56 1722 aa23.95■■□□□ 1.42
UBXN1-201ENST00000294119 CAMKK2Q96RR4 588 aa23.94■■□□□ 1.42
UBXN1-201ENST00000294119 THSD7AQ9UPZ6 1657 aa23.93■■□□□ 1.42
UBXN1-201ENST00000294119 EZH2Q15910 746 aaKnown RBP23.93■■□□□ 1.42
UBXN1-201ENST00000294119 CCDC9Q9Y3X0 531 aaKnown RBP23.93■■□□□ 1.42
UBXN1-201ENST00000294119 FAM98CQ17RN3 349 aaKnown RBP23.92■■□□□ 1.42
UBXN1-201ENST00000294119 KRT28Q7Z3Y7 464 aa23.92■■□□□ 1.42
UBXN1-201ENST00000294119 FAM83GA6ND36 823 aa23.91■■□□□ 1.42
UBXN1-201ENST00000294119 CABLES1Q8TDN4 633 aa23.91■■□□□ 1.42
UBXN1-201ENST00000294119 ADGRB2O60241 1585 aa23.91■■□□□ 1.42
UBXN1-201ENST00000294119 RREB1Q92766 1687 aa23.9■■□□□ 1.42
UBXN1-201ENST00000294119 IFFO2Q5TF58 517 aa23.9■■□□□ 1.42
UBXN1-201ENST00000294119 PARD3Q8TEW0 1356 aa23.9■■□□□ 1.42
UBXN1-201ENST00000294119 PPLO60437 1756 aa23.89■■□□□ 1.42
UBXN1-201ENST00000294119 NUTM2FA1L443 756 aa23.88■■□□□ 1.41
UBXN1-201ENST00000294119 FAM182BQ5T319 152 aa23.88■■□□□ 1.41
UBXN1-201ENST00000294119 SBNO1A3KN83 1393 aa23.88■■□□□ 1.41
UBXN1-201ENST00000294119 RPGRIP1LQ68CZ1 1315 aa23.87■■□□□ 1.41
UBXN1-201ENST00000294119 NINLQ9Y2I6 1382 aa23.87■■□□□ 1.41
UBXN1-201ENST00000294119 NUP188Q5SRE5 1749 aa23.85■■□□□ 1.41
UBXN1-201ENST00000294119 A0A0G2JS52 829 aa23.85■■□□□ 1.41
UBXN1-201ENST00000294119 MYT1Q01538 1121 aa23.85■■□□□ 1.41
UBXN1-201ENST00000294119 KNDC1Q76NI1 1749 aa23.84■■□□□ 1.41
UBXN1-201ENST00000294119 ARHGEF10O15013 1369 aa23.84■■□□□ 1.41
UBXN1-201ENST00000294119 HAP1P54257 671 aaPredicted RBP23.84■■□□□ 1.41
UBXN1-201ENST00000294119 WAPLQ7Z5K2 1190 aa23.84■■□□□ 1.41
UBXN1-201ENST00000294119 PLEKHH1Q9ULM0 1364 aa23.83■■□□□ 1.41
UBXN1-201ENST00000294119 SPATA31A5Q5VU36 1347 aa23.83■■□□□ 1.4
UBXN1-201ENST00000294119 SPATA31A7Q8IWB4 1347 aa23.83■■□□□ 1.4
UBXN1-201ENST00000294119 NRXN1Q9ULB1 1477 aa23.82■■□□□ 1.4
UBXN1-201ENST00000294119 COL14A1Q05707 1796 aaKnown RBP23.82■■□□□ 1.4
UBXN1-201ENST00000294119 ABCC11Q96J66 1382 aa23.81■■□□□ 1.4
UBXN1-201ENST00000294119 RGPD8O14715 1765 aaPredicted RBP23.81■■□□□ 1.4
UBXN1-201ENST00000294119 CAMTA1Q9Y6Y1 1673 aa23.8■■□□□ 1.4
UBXN1-201ENST00000294119 PSME1Q06323 249 aa23.8■■□□□ 1.4
UBXN1-201ENST00000294119 BTG4Q9NY30 223 aa23.8■■□□□ 1.4
UBXN1-201ENST00000294119 RRBP1Q9P2E9 1410 aaKnown RBP23.78■■□□□ 1.4
UBXN1-201ENST00000294119 ZNF784Q8NCA9 323 aaPredicted RBP23.78■■□□□ 1.4
UBXN1-201ENST00000294119 PHF8Q9UPP1 1060 aa23.78■■□□□ 1.4
UBXN1-201ENST00000294119 IFT172Q9UG01 1749 aa23.77■■□□□ 1.4
UBXN1-201ENST00000294119 CEP350Q5VT06 3117 aa23.77■■□□□ 1.4
UBXN1-201ENST00000294119 TRIM37O94972 964 aa23.76■■□□□ 1.39
UBXN1-201ENST00000294119 FAM196AQ6ZSG2 479 aa23.76■■□□□ 1.39
UBXN1-201ENST00000294119 SPON1Q9HCB6 807 aa23.76■■□□□ 1.39
UBXN1-201ENST00000294119 TRPM3Q9HCF6 1732 aaPredicted RBP23.75■■□□□ 1.39
UBXN1-201ENST00000294119 KCNQ2O43526 872 aa23.74■■□□□ 1.39
UBXN1-201ENST00000294119 ALS2Q96Q42 1657 aa23.73■■□□□ 1.39
UBXN1-201ENST00000294119 DCAF8L1A6NGE4 600 aa23.73■■□□□ 1.39
UBXN1-201ENST00000294119 APBA3O96018 575 aa23.73■■□□□ 1.39
UBXN1-201ENST00000294119 CRYBG1Q9Y4K1 1723 aa23.73■■□□□ 1.39
UBXN1-201ENST00000294119 SENP3-EIF4A1A0A087X0R7 540 aa23.71■■□□□ 1.39
UBXN1-201ENST00000294119 STK26Q9P289 416 aa23.71■■□□□ 1.39
UBXN1-201ENST00000294119 ADGRF5Q8IZF2 1346 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms