RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 APAF1O14727 1248 aa26.32■■□□□ 1.8
CXCL16-201ENST00000293778 CGNL1Q0VF96 1302 aa26.31■■□□□ 1.8
CXCL16-201ENST00000293778 PPP6R1Q9UPN7 881 aa26.31■■□□□ 1.8
CXCL16-201ENST00000293778 ANKRD36BQ8N2N9 1353 aa26.3■■□□□ 1.8
CXCL16-201ENST00000293778 STK26Q9P289 416 aa26.3■■□□□ 1.8
CXCL16-201ENST00000293778 SLFN5Q08AF3 891 aa26.29■■□□□ 1.8
CXCL16-201ENST00000293778 SAFB2Q14151 953 aaKnown RBP eCLIP26.29■■□□□ 1.8
CXCL16-201ENST00000293778 SENP3Q9H4L4 574 aaPredicted RBP26.29■■□□□ 1.8
CXCL16-201ENST00000293778 CABP2Q9NPB3 220 aa26.29■■□□□ 1.8
CXCL16-201ENST00000293778 ANP32EQ9BTT0 268 aa26.28■■□□□ 1.8
CXCL16-201ENST00000293778 TNNT2P45379 298 aaPredicted RBP26.27■■□□□ 1.8
CXCL16-201ENST00000293778 NGEFQ8N5V2 710 aa26.27■■□□□ 1.8
CXCL16-201ENST00000293778 PTPRMP28827 1452 aa26.26■■□□□ 1.79
CXCL16-201ENST00000293778 STAG3Q9UJ98 1225 aa26.26■■□□□ 1.79
CXCL16-201ENST00000293778 CLTCQ00610 1675 aaKnown RBP26.25■■□□□ 1.79
CXCL16-201ENST00000293778 TRMT2AQ8IZ69 625 aaKnown RBP26.25■■□□□ 1.79
CXCL16-201ENST00000293778 SHPRHQ149N8 1683 aa26.25■■□□□ 1.79
CXCL16-201ENST00000293778 YTHDC2Q9H6S0 1430 aaKnown RBP26.25■■□□□ 1.79
CXCL16-201ENST00000293778 CRBNQ96SW2 442 aa26.24■■□□□ 1.79
CXCL16-201ENST00000293778 NSD2O96028 1365 aa26.24■■□□□ 1.79
CXCL16-201ENST00000293778 NINLQ9Y2I6 1382 aa26.23■■□□□ 1.79
CXCL16-201ENST00000293778 MSH5O43196 834 aa26.23■■□□□ 1.79
CXCL16-201ENST00000293778 ALKQ9UM73 1620 aa26.22■■□□□ 1.79
CXCL16-201ENST00000293778 SRPK2P78362 688 aaKnown RBP26.22■■□□□ 1.79
CXCL16-201ENST00000293778 PRAM1Q96QH2 718 aa26.2■■□□□ 1.79
CXCL16-201ENST00000293778 POGKQ9P215 609 aa26.2■■□□□ 1.78
CXCL16-201ENST00000293778 SPATA31D1Q6ZQQ2 1576 aa26.2■■□□□ 1.78
CXCL16-201ENST00000293778 E9PSI1 815 aa26.19■■□□□ 1.78
CXCL16-201ENST00000293778 SPINK5Q9NQ38 1064 aaPredicted RBP26.19■■□□□ 1.78
CXCL16-201ENST00000293778 NKTRP30414 1462 aaKnown RBP26.19■■□□□ 1.78
CXCL16-201ENST00000293778 MTHFSP49914 203 aa26.19■■□□□ 1.78
CXCL16-201ENST00000293778 CFAP53Q96M91 514 aa26.19■■□□□ 1.78
CXCL16-201ENST00000293778 C20orf194Q5TEA3 1177 aa26.18■■□□□ 1.78
CXCL16-201ENST00000293778 MINK1Q8N4C8 1332 aaPredicted RBP26.18■■□□□ 1.78
CXCL16-201ENST00000293778 A0A1W2PP64 1363 aa26.17■■□□□ 1.78
CXCL16-201ENST00000293778 ATAD2Q6PL18 1390 aa26.17■■□□□ 1.78
CXCL16-201ENST00000293778 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.17■■□□□ 1.78
CXCL16-201ENST00000293778 MLECQ14165 292 aa26.16■■□□□ 1.78
CXCL16-201ENST00000293778 A2ML1A8K2U0 1454 aa26.16■■□□□ 1.78
CXCL16-201ENST00000293778 ARHGEF40Q8TER5 1519 aa26.16■■□□□ 1.78
CXCL16-201ENST00000293778 ABCC11Q96J66 1382 aa26.15■■□□□ 1.78
CXCL16-201ENST00000293778 RUNDC1Q96C34 613 aa26.15■■□□□ 1.78
CXCL16-201ENST00000293778 DMRT2Q9Y5R5 561 aa26.14■■□□□ 1.77
CXCL16-201ENST00000293778 WWC1Q8IX03 1113 aa26.13■■□□□ 1.77
CXCL16-201ENST00000293778 TERF2IPQ9NYB0 399 aa26.12■■□□□ 1.77
CXCL16-201ENST00000293778 KIF13AQ9H1H9 1805 aa26.12■■□□□ 1.77
CXCL16-201ENST00000293778 RIMS2Q9UQ26 1411 aa26.12■■□□□ 1.77
CXCL16-201ENST00000293778 TCERG1O14776 1098 aaKnown RBP26.11■■□□□ 1.77
CXCL16-201ENST00000293778 IQSEC2Q5JU85 1478 aa26.11■■□□□ 1.77
CXCL16-201ENST00000293778 TCP11L2Q8N4U5 519 aa26.08■■□□□ 1.77
CXCL16-201ENST00000293778 CD163L1Q9NR16 1453 aa26.07■■□□□ 1.76
CXCL16-201ENST00000293778 CDK19Q9BWU1 502 aa26.07■■□□□ 1.76
CXCL16-201ENST00000293778 DLC1Q96QB1 1528 aa26.07■■□□□ 1.76
CXCL16-201ENST00000293778 NEUROD2Q15784 382 aa26.06■■□□□ 1.76
CXCL16-201ENST00000293778 GGNBP2Q9H3C7 697 aa26.06■■□□□ 1.76
CXCL16-201ENST00000293778 RRP7AQ9Y3A4 280 aaKnown RBP26.06■■□□□ 1.76
CXCL16-201ENST00000293778 MED14O60244 1454 aa26.04■■□□□ 1.76
CXCL16-201ENST00000293778 ESF1Q9H501 851 aaKnown RBP26.04■■□□□ 1.76
CXCL16-201ENST00000293778 SETD1AO15047 1707 aaKnown RBP26.04■■□□□ 1.76
CXCL16-201ENST00000293778 HDGFL2Q7Z4V5 671 aaPredicted RBP26.04■■□□□ 1.76
CXCL16-201ENST00000293778 PHF23Q9BUL5 403 aaPredicted RBP26.04■■□□□ 1.76
CXCL16-201ENST00000293778 ANKRD26Q9UPS8 1709 aa26.04■■□□□ 1.76
CXCL16-201ENST00000293778 BCAR3O75815 825 aa26.03■■□□□ 1.76
CXCL16-201ENST00000293778 ERICH6Q7L0X2 663 aa26.03■■□□□ 1.76
CXCL16-201ENST00000293778 FYB1O15117 783 aa26.02■■□□□ 1.76
CXCL16-201ENST00000293778 U2AF1L5P0DN76 240 aaPredicted RBP26.02■■□□□ 1.76
CXCL16-201ENST00000293778 MS4A1P11836 297 aa26.02■■□□□ 1.76
CXCL16-201ENST00000293778 U2AF1Q01081 240 aaKnown RBP eCLIP26.02■■□□□ 1.76
CXCL16-201ENST00000293778 ZMYM3Q14202 1370 aa26.02■■□□□ 1.76
CXCL16-201ENST00000293778 NLRP1Q9C000 1473 aa26.01■■□□□ 1.75
CXCL16-201ENST00000293778 CCDC27Q2M243 656 aa26■■□□□ 1.75
CXCL16-201ENST00000293778 WDR63Q8IWG1 891 aa26■■□□□ 1.75
CXCL16-201ENST00000293778 KDM2BQ8NHM5 1336 aa26■■□□□ 1.75
CXCL16-201ENST00000293778 CABP1Q9NZU7 370 aa26■■□□□ 1.75
CXCL16-201ENST00000293778 WAPLQ7Z5K2 1190 aa25.99■■□□□ 1.75
CXCL16-201ENST00000293778 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.99■■□□□ 1.75
CXCL16-201ENST00000293778 NCBP3Q53F19 620 aaKnown RBP25.99■■□□□ 1.75
CXCL16-201ENST00000293778 CENPQQ7L2Z9 268 aaPredicted RBP25.98■■□□□ 1.75
CXCL16-201ENST00000293778 NRXN3Q9Y4C0 1643 aa25.97■■□□□ 1.75
CXCL16-201ENST00000293778 ANP32AP39687 249 aaKnown RBP25.97■■□□□ 1.75
CXCL16-201ENST00000293778 COL3A1P02461 1466 aaPredicted RBP25.97■■□□□ 1.75
CXCL16-201ENST00000293778 DNAJC5Q9H3Z4 198 aa25.96■■□□□ 1.75
CXCL16-201ENST00000293778 ADGRB2O60241 1585 aa25.96■■□□□ 1.75
CXCL16-201ENST00000293778 PDE4AP27815 886 aa25.95■■□□□ 1.75
CXCL16-201ENST00000293778 KIF20BQ96Q89 1820 aa25.95■■□□□ 1.74
CXCL16-201ENST00000293778 ATP7BP35670 1465 aa25.94■■□□□ 1.74
CXCL16-201ENST00000293778 U2SURPO15042 1029 aaKnown RBP25.93■■□□□ 1.74
CXCL16-201ENST00000293778 METP08581 1390 aa25.92■■□□□ 1.74
CXCL16-201ENST00000293778 PDE3AQ14432 1141 aa25.92■■□□□ 1.74
CXCL16-201ENST00000293778 TNRQ92752 1358 aa25.91■■□□□ 1.74
CXCL16-201ENST00000293778 BACH2Q9BYV9 841 aa25.91■■□□□ 1.74
CXCL16-201ENST00000293778 HDGFP51858 240 aaKnown RBP25.91■■□□□ 1.74
CXCL16-201ENST00000293778 CANXP27824 592 aaKnown RBP25.9■■□□□ 1.74
CXCL16-201ENST00000293778 SKAP1Q86WV1 359 aa25.9■■□□□ 1.74
CXCL16-201ENST00000293778 PLEKHF1Q96S99 279 aa25.89■■□□□ 1.74
CXCL16-201ENST00000293778 MYH16Q9H6N6 1097 aa25.89■■□□□ 1.74
CXCL16-201ENST00000293778 RARSP54136 660 aaKnown RBP25.88■■□□□ 1.73
CXCL16-201ENST00000293778 NOP58Q9Y2X3 529 aaKnown RBP25.88■■□□□ 1.73
CXCL16-201ENST00000293778 IPO9Q96P70 1041 aaKnown RBP25.87■■□□□ 1.73
CXCL16-201ENST00000293778 WASLO00401 505 aaPredicted RBP25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms