RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 TMEM131LA2VDJ0 1609 aa15.42■□□□□ 0.06
SYNGAP1-201ENST00000293748 TNNT2P45379 298 aaPredicted RBP15.42■□□□□ 0.06
SYNGAP1-201ENST00000293748 SUPT16HQ9Y5B9 1047 aaKnown RBP15.42■□□□□ 0.06
SYNGAP1-201ENST00000293748 DIP2AQ14689 1571 aa15.41■□□□□ 0.06
SYNGAP1-201ENST00000293748 HIRIP3Q9BW71 556 aaPredicted RBP15.41■□□□□ 0.06
SYNGAP1-201ENST00000293748 TMEM94Q12767 1356 aa15.4■□□□□ 0.06
SYNGAP1-201ENST00000293748 MYOM2P54296 1465 aa15.4■□□□□ 0.06
SYNGAP1-201ENST00000293748 SRPK2P78362 688 aaKnown RBP15.39■□□□□ 0.06
SYNGAP1-201ENST00000293748 MYH16Q9H6N6 1097 aa15.39■□□□□ 0.06
SYNGAP1-201ENST00000293748 IQGAP1P46940 1657 aa15.39■□□□□ 0.05
SYNGAP1-201ENST00000293748 LRPPRCP42704 1394 aaKnown RBP15.39■□□□□ 0.05
SYNGAP1-201ENST00000293748 NOP58Q9Y2X3 529 aaKnown RBP15.39■□□□□ 0.05
SYNGAP1-201ENST00000293748 HAP1P54257 671 aaPredicted RBP15.38■□□□□ 0.05
SYNGAP1-201ENST00000293748 PRAM1Q96QH2 718 aa15.38■□□□□ 0.05
SYNGAP1-201ENST00000293748 CENPJQ9HC77 1338 aaPredicted RBP15.37■□□□□ 0.05
SYNGAP1-201ENST00000293748 NKTRP30414 1462 aaKnown RBP15.37■□□□□ 0.05
SYNGAP1-201ENST00000293748 NCLP19338 710 aaKnown RBP15.37■□□□□ 0.05
SYNGAP1-201ENST00000293748 MINK1Q8N4C8 1332 aaPredicted RBP15.36■□□□□ 0.05
SYNGAP1-201ENST00000293748 FBXO41Q8TF61 875 aa15.36■□□□□ 0.05
SYNGAP1-201ENST00000293748 POLR1AO95602 1720 aaPredicted RBP15.36■□□□□ 0.05
SYNGAP1-201ENST00000293748 NEURL4Q96JN8 1562 aa15.36■□□□□ 0.05
SYNGAP1-201ENST00000293748 SIRT1Q96EB6 747 aa15.36■□□□□ 0.05
SYNGAP1-201ENST00000293748 NEXMIFQ5QGS0 1516 aa15.35■□□□□ 0.05
SYNGAP1-201ENST00000293748 EVC2Q86UK5 1308 aa15.35■□□□□ 0.05
SYNGAP1-201ENST00000293748 YTHDC2Q9H6S0 1430 aaKnown RBP15.35■□□□□ 0.05
SYNGAP1-201ENST00000293748 ABCC11Q96J66 1382 aa15.34■□□□□ 0.05
SYNGAP1-201ENST00000293748 RBM33Q96EV2 1170 aaKnown RBP15.34■□□□□ 0.05
SYNGAP1-201ENST00000293748 NCOA3Q9Y6Q9 1424 aa15.34■□□□□ 0.05
SYNGAP1-201ENST00000293748 NGDNQ8NEJ9 315 aaKnown RBP15.33■□□□□ 0.05
SYNGAP1-201ENST00000293748 METP08581 1390 aa15.33■□□□□ 0.04
SYNGAP1-201ENST00000293748 ADAMTS13Q76LX8 1427 aa15.33■□□□□ 0.04
SYNGAP1-201ENST00000293748 PIK3C2GO75747 1445 aa15.33■□□□□ 0.04
SYNGAP1-201ENST00000293748 TMF1P82094 1093 aa15.32■□□□□ 0.04
SYNGAP1-201ENST00000293748 ESCO1Q5FWF5 840 aa15.32■□□□□ 0.04
SYNGAP1-201ENST00000293748 LMOD2Q6P5Q4 547 aa15.32■□□□□ 0.04
SYNGAP1-201ENST00000293748 NUTM2FA1L443 756 aa15.32■□□□□ 0.04
SYNGAP1-201ENST00000293748 PSME1Q06323 249 aa15.31■□□□□ 0.04
SYNGAP1-201ENST00000293748 WAPLQ7Z5K2 1190 aa15.31■□□□□ 0.04
SYNGAP1-201ENST00000293748 PRAG1Q86YV5 1406 aa15.31■□□□□ 0.04
SYNGAP1-201ENST00000293748 SLAIN2Q9P270 581 aa15.3■□□□□ 0.04
SYNGAP1-201ENST00000293748 SETBP1Q9Y6X0 1596 aa15.3■□□□□ 0.04
SYNGAP1-201ENST00000293748 ALKQ9UM73 1620 aa15.29■□□□□ 0.04
SYNGAP1-201ENST00000293748 IQSEC2Q5JU85 1478 aa15.29■□□□□ 0.04
SYNGAP1-201ENST00000293748 NAP1L5Q96NT1 182 aaPredicted RBP15.29■□□□□ 0.04
SYNGAP1-201ENST00000293748 GPRASP1Q5JY77 1395 aa15.29■□□□□ 0.04
SYNGAP1-201ENST00000293748 NBPF1Q3BBV0 1214 aa15.28■□□□□ 0.04
SYNGAP1-201ENST00000293748 PTMAP06454 111 aaKnown RBP15.28■□□□□ 0.04
SYNGAP1-201ENST00000293748 LAS1LQ9Y4W2 734 aaKnown RBP15.28■□□□□ 0.04
SYNGAP1-201ENST00000293748 HDGFL2Q7Z4V5 671 aaPredicted RBP15.27■□□□□ 0.04
SYNGAP1-201ENST00000293748 LAMC1P11047 1609 aa15.27■□□□□ 0.04
SYNGAP1-201ENST00000293748 PTCH1Q13635 1447 aa15.27■□□□□ 0.03
SYNGAP1-201ENST00000293748 FAM135BQ49AJ0 1406 aa15.27■□□□□ 0.03
SYNGAP1-201ENST00000293748 MEX3CQ5U5Q3 659 aaKnown RBP15.26■□□□□ 0.03
SYNGAP1-201ENST00000293748 RTN4Q9NQC3 1192 aaKnown RBP15.26■□□□□ 0.03
SYNGAP1-201ENST00000293748 ADGRL3Q9HAR2 1447 aa15.25■□□□□ 0.03
SYNGAP1-201ENST00000293748 NPHP3Q7Z494 1330 aa15.25■□□□□ 0.03
SYNGAP1-201ENST00000293748 PAK3O75914 559 aaPredicted RBP15.25■□□□□ 0.03
SYNGAP1-201ENST00000293748 WASLO00401 505 aaPredicted RBP15.24■□□□□ 0.03
SYNGAP1-201ENST00000293748 DEKP35659 375 aaKnown RBP15.24■□□□□ 0.03
SYNGAP1-201ENST00000293748 PHF23Q9BUL5 403 aaPredicted RBP15.24■□□□□ 0.03
SYNGAP1-201ENST00000293748 TERF2IPQ9NYB0 399 aa15.24■□□□□ 0.03
SYNGAP1-201ENST00000293748 PHF8Q9UPP1 1060 aa15.23■□□□□ 0.03
SYNGAP1-201ENST00000293748 CDK19Q9BWU1 502 aa15.23■□□□□ 0.03
SYNGAP1-201ENST00000293748 STRCQ7RTU9 1775 aa15.23■□□□□ 0.03
SYNGAP1-201ENST00000293748 LRRC7Q96NW7 1537 aa15.23■□□□□ 0.03
SYNGAP1-201ENST00000293748 ROBO2Q9HCK4 1378 aa15.23■□□□□ 0.03
SYNGAP1-201ENST00000293748 DNTTIP2Q5QJE6 756 aaKnown RBP15.23■□□□□ 0.03
SYNGAP1-201ENST00000293748 RBM19Q9Y4C8 960 aaKnown RBP15.23■□□□□ 0.03
SYNGAP1-201ENST00000293748 MYO5BQ9ULV0 1848 aa15.23■□□□□ 0.03
SYNGAP1-201ENST00000293748 NBPF8Q3BBV2 869 aa15.22■□□□□ 0.03
SYNGAP1-201ENST00000293748 PPLO60437 1756 aa15.22■□□□□ 0.03
SYNGAP1-201ENST00000293748 DCCP43146 1447 aa15.22■□□□□ 0.03
SYNGAP1-201ENST00000293748 USP47Q96K76 1375 aa15.21■□□□□ 0.03
SYNGAP1-201ENST00000293748 CCER2I3L3R5 266 aa15.21■□□□□ 0.03
SYNGAP1-201ENST00000293748 LRRC59Q96AG4 307 aaKnown RBP15.21■□□□□ 0.02
SYNGAP1-201ENST00000293748 CCDC61Q9Y6R9 512 aa15.21■□□□□ 0.02
SYNGAP1-201ENST00000293748 ATAD2Q6PL18 1390 aa15.2■□□□□ 0.02
SYNGAP1-201ENST00000293748 NUDT16Q96DE0 195 aaKnown RBP15.2■□□□□ 0.02
SYNGAP1-201ENST00000293748 ST20-MTHFSA0A0A6YYL1 179 aa15.19■□□□□ 0.02
SYNGAP1-201ENST00000293748 RALGAPBQ86X10 1494 aa15.19■□□□□ 0.02
SYNGAP1-201ENST00000293748 NRXN1Q9ULB1 1477 aa15.19■□□□□ 0.02
SYNGAP1-201ENST00000293748 B4GALNT3Q6L9W6 998 aa15.19■□□□□ 0.02
SYNGAP1-201ENST00000293748 CFAP53Q96M91 514 aa15.19■□□□□ 0.02
SYNGAP1-201ENST00000293748 PLEKHG5O94827 1062 aa15.19■□□□□ 0.02
SYNGAP1-201ENST00000293748 PTPRUQ92729 1446 aa15.19■□□□□ 0.02
SYNGAP1-201ENST00000293748 L1TD1Q5T7N2 865 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-201ENST00000293748 CASC1Q6TDU7 716 aa15.17■□□□□ 0.02
SYNGAP1-201ENST00000293748 TECPR2O15040 1411 aa15.17■□□□□ 0.02
SYNGAP1-201ENST00000293748 PMFBP1Q8TBY8 1022 aa15.17■□□□□ 0.02
SYNGAP1-201ENST00000293748 KNSTRNQ9Y448 316 aa15.17■□□□□ 0.02
SYNGAP1-201ENST00000293748 ZNF692Q9BU19 519 aaPredicted RBP15.17■□□□□ 0.02
SYNGAP1-201ENST00000293748 CABP2Q9NPB3 220 aa15.17■□□□□ 0.02
SYNGAP1-201ENST00000293748 DLC1Q96QB1 1528 aa15.16■□□□□ 0.02
SYNGAP1-201ENST00000293748 FOXO3O43524 673 aa15.16■□□□□ 0.02
SYNGAP1-201ENST00000293748 RGS3P49796 1198 aa15.16■□□□□ 0.02
SYNGAP1-201ENST00000293748 FTSJ3Q8IY81 847 aaKnown RBP15.15■□□□□ 0.02
SYNGAP1-201ENST00000293748 KRT28Q7Z3Y7 464 aa15.15■□□□□ 0.02
SYNGAP1-201ENST00000293748 CDK11BP21127 795 aaKnown RBP15.15■□□□□ 0.02
SYNGAP1-201ENST00000293748 ZRSR1Q15695 479 aaKnown RBP15.15■□□□□ 0.02
SYNGAP1-201ENST00000293748 NWD1Q149M9 1564 aa15.14■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms