RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 CEP350Q5VT06 3117 aa19.82■□□□□ 0.76
PSMB4-201ENST00000290541 MYOM2P54296 1465 aa19.81■□□□□ 0.76
PSMB4-201ENST00000290541 TMEM131LA2VDJ0 1609 aa19.8■□□□□ 0.76
PSMB4-201ENST00000290541 IQGAP3Q86VI3 1631 aa19.8■□□□□ 0.76
PSMB4-201ENST00000290541 NALCNQ8IZF0 1738 aa19.79■□□□□ 0.76
PSMB4-201ENST00000290541 UTRNP46939 3433 aa19.77■□□□□ 0.76
PSMB4-201ENST00000290541 PPP1R15AO75807 674 aaPredicted RBP19.77■□□□□ 0.76
PSMB4-201ENST00000290541 R3HDM1Q15032 1099 aaKnown RBP19.77■□□□□ 0.76
PSMB4-201ENST00000290541 SOS2Q07890 1332 aaPredicted RBP19.76■□□□□ 0.75
PSMB4-201ENST00000290541 BAG6P46379 1132 aa19.74■□□□□ 0.75
PSMB4-201ENST00000290541 SLC52A1Q9NWF4 448 aa19.74■□□□□ 0.75
PSMB4-201ENST00000290541 AMOTL2Q9Y2J4 779 aa19.74■□□□□ 0.75
PSMB4-201ENST00000290541 CAMTA1Q9Y6Y1 1673 aa19.74■□□□□ 0.75
PSMB4-201ENST00000290541 RGPD1P0DJD0 1748 aa19.73■□□□□ 0.75
PSMB4-201ENST00000290541 ZNF784Q8NCA9 323 aaPredicted RBP19.73■□□□□ 0.75
PSMB4-201ENST00000290541 E9PCH4 1651 aa19.72■□□□□ 0.75
PSMB4-201ENST00000290541 SLC4A1APQ9BWU0 796 aaKnown RBP19.72■□□□□ 0.75
PSMB4-201ENST00000290541 ADGRL3Q9HAR2 1447 aa19.72■□□□□ 0.75
PSMB4-201ENST00000290541 MPHOSPH9Q99550 1183 aa19.71■□□□□ 0.75
PSMB4-201ENST00000290541 C1orf167Q5SNV9 1468 aa19.71■□□□□ 0.75
PSMB4-201ENST00000290541 SLIT2O94813 1529 aa19.71■□□□□ 0.75
PSMB4-201ENST00000290541 C1QTNF8P60827 252 aa19.7■□□□□ 0.74
PSMB4-201ENST00000290541 TNS1Q9HBL0 1735 aaKnown RBP19.69■□□□□ 0.74
PSMB4-201ENST00000290541 SEPT12Q8IYM1 358 aa19.68■□□□□ 0.74
PSMB4-201ENST00000290541 NRXN3Q9Y4C0 1643 aa19.68■□□□□ 0.74
PSMB4-201ENST00000290541 HDGFP51858 240 aaKnown RBP19.67■□□□□ 0.74
PSMB4-201ENST00000290541 DISP2A7MBM2 1401 aa19.66■□□□□ 0.74
PSMB4-201ENST00000290541 EN1Q05925 392 aaPredicted RBP19.65■□□□□ 0.74
PSMB4-201ENST00000290541 UNC5CLQ8IV45 518 aa19.65■□□□□ 0.74
PSMB4-201ENST00000290541 RPRD2Q5VT52 1461 aaKnown RBP19.65■□□□□ 0.74
PSMB4-201ENST00000290541 ACIN1Q9UKV3 1341 aaKnown RBP19.64■□□□□ 0.73
PSMB4-201ENST00000290541 KRT27Q7Z3Y8 459 aa19.63■□□□□ 0.73
PSMB4-201ENST00000290541 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.63■□□□□ 0.73
PSMB4-201ENST00000290541 NINLQ9Y2I6 1382 aa19.62■□□□□ 0.73
PSMB4-201ENST00000290541 ONECUT3O60422 494 aaPredicted RBP19.61■□□□□ 0.73
PSMB4-201ENST00000290541 ORAI2Q96SN7 254 aa19.59■□□□□ 0.73
PSMB4-201ENST00000290541 PXDNQ92626 1479 aa19.59■□□□□ 0.73
PSMB4-201ENST00000290541 DCAF8L1A6NGE4 600 aa19.58■□□□□ 0.72
PSMB4-201ENST00000290541 PLCH1Q4KWH8 1693 aa19.58■□□□□ 0.72
PSMB4-201ENST00000290541 USP32Q8NFA0 1604 aa19.58■□□□□ 0.72
PSMB4-201ENST00000290541 RREB1Q92766 1687 aa19.57■□□□□ 0.72
PSMB4-201ENST00000290541 CHD4Q14839 1912 aa19.57■□□□□ 0.72
PSMB4-201ENST00000290541 NWD2Q9ULI1 1742 aa19.56■□□□□ 0.72
PSMB4-201ENST00000290541 DHX57Q6P158 1386 aaKnown RBP19.56■□□□□ 0.72
PSMB4-201ENST00000290541 NUP188Q5SRE5 1749 aa19.54■□□□□ 0.72
PSMB4-201ENST00000290541 VPS72Q15906 364 aa19.53■□□□□ 0.72
PSMB4-201ENST00000290541 EZH2Q15910 746 aaKnown RBP19.53■□□□□ 0.72
PSMB4-201ENST00000290541 CLTCL1P53675 1640 aa19.53■□□□□ 0.72
PSMB4-201ENST00000290541 ANKRD30BQ9BXX2 1392 aa19.53■□□□□ 0.72
PSMB4-201ENST00000290541 ADGRB2O60241 1585 aa19.53■□□□□ 0.72
PSMB4-201ENST00000290541 METP08581 1390 aa19.52■□□□□ 0.72
PSMB4-201ENST00000290541 PPP1R1BQ9UD71 204 aaPredicted RBP19.49■□□□□ 0.71
PSMB4-201ENST00000290541 CHGAP10645 457 aaKnown RBP19.48■□□□□ 0.71
PSMB4-201ENST00000290541 CAMKK2Q96RR4 588 aa19.48■□□□□ 0.71
PSMB4-201ENST00000290541 NRAPQ86VF7 1730 aa19.46■□□□□ 0.71
PSMB4-201ENST00000290541 NPHP3Q7Z494 1330 aa19.46■□□□□ 0.71
PSMB4-201ENST00000290541 CCDC144AA2RUR9 1427 aa19.45■□□□□ 0.7
PSMB4-201ENST00000290541 SPON1Q9HCB6 807 aa19.45■□□□□ 0.7
PSMB4-201ENST00000290541 PARD3Q8TEW0 1356 aa19.44■□□□□ 0.7
PSMB4-201ENST00000290541 ABCA3Q99758 1704 aa19.43■□□□□ 0.7
PSMB4-201ENST00000290541 SIN3AQ96ST3 1273 aa19.43■□□□□ 0.7
PSMB4-201ENST00000290541 NRKQ7Z2Y5 1582 aa19.42■□□□□ 0.7
PSMB4-201ENST00000290541 KCNQ2O43526 872 aa19.42■□□□□ 0.7
PSMB4-201ENST00000290541 FAM182BQ5T319 152 aa19.42■□□□□ 0.7
PSMB4-201ENST00000290541 THSD7AQ9UPZ6 1657 aa19.42■□□□□ 0.7
PSMB4-201ENST00000290541 KIF1BO60333 1816 aa19.41■□□□□ 0.7
PSMB4-201ENST00000290541 XPCQ01831 940 aaPredicted RBP19.39■□□□□ 0.69
PSMB4-201ENST00000290541 CCDC9Q9Y3X0 531 aaKnown RBP19.39■□□□□ 0.69
PSMB4-201ENST00000290541 SPATA31E1Q6ZUB1 1445 aa19.39■□□□□ 0.69
PSMB4-201ENST00000290541 MYOM1P52179 1685 aa19.39■□□□□ 0.69
PSMB4-201ENST00000290541 RGL3Q3MIN7 710 aa19.38■□□□□ 0.69
PSMB4-201ENST00000290541 CASZ1Q86V15 1759 aa19.38■□□□□ 0.69
PSMB4-201ENST00000290541 CDC42BPGQ6DT37 1551 aa19.37■□□□□ 0.69
PSMB4-201ENST00000290541 A0A0G2JS52 829 aa19.37■□□□□ 0.69
PSMB4-201ENST00000290541 MYT1Q01538 1121 aa19.37■□□□□ 0.69
PSMB4-201ENST00000290541 ZNF326Q5BKZ1 582 aaKnown RBP19.37■□□□□ 0.69
PSMB4-201ENST00000290541 NEUROD1Q13562 356 aa19.36■□□□□ 0.69
PSMB4-201ENST00000290541 FAM98CQ17RN3 349 aaKnown RBP19.36■□□□□ 0.69
PSMB4-201ENST00000290541 PRAG1Q86YV5 1406 aa19.35■□□□□ 0.69
PSMB4-201ENST00000290541 ROBO2Q9HCK4 1378 aa19.35■□□□□ 0.69
PSMB4-201ENST00000290541 GIGYF1O75420 1035 aaPredicted RBP19.35■□□□□ 0.69
PSMB4-201ENST00000290541 FOXO3O43524 673 aa19.34■□□□□ 0.69
PSMB4-201ENST00000290541 SPATA31A3Q5VYP0 1347 aa19.33■□□□□ 0.69
PSMB4-201ENST00000290541 CCER1Q8TC90 406 aaPredicted RBP19.33■□□□□ 0.68
PSMB4-201ENST00000290541 NEXMIFQ5QGS0 1516 aa19.32■□□□□ 0.68
PSMB4-201ENST00000290541 ESCO1Q5FWF5 840 aa19.32■□□□□ 0.68
PSMB4-201ENST00000290541 TRIM37O94972 964 aa19.3■□□□□ 0.68
PSMB4-201ENST00000290541 LRPPRCP42704 1394 aaKnown RBP19.3■□□□□ 0.68
PSMB4-201ENST00000290541 SHANK3Q9BYB0 1731 aa19.29■□□□□ 0.68
PSMB4-201ENST00000290541 NBPF8Q3BBV2 869 aa19.29■□□□□ 0.68
PSMB4-201ENST00000290541 NBPF14Q5TI25 921 aa19.29■□□□□ 0.68
PSMB4-201ENST00000290541 PPLO60437 1756 aa19.29■□□□□ 0.68
PSMB4-201ENST00000290541 RPGRIP1LQ68CZ1 1315 aa19.27■□□□□ 0.68
PSMB4-201ENST00000290541 KIF1AQ12756 1690 aa19.27■□□□□ 0.68
PSMB4-201ENST00000290541 APBA3O96018 575 aa19.27■□□□□ 0.68
PSMB4-201ENST00000290541 IFT172Q9UG01 1749 aa19.27■□□□□ 0.68
PSMB4-201ENST00000290541 ADGRF5Q8IZF2 1346 aa19.25■□□□□ 0.67
PSMB4-201ENST00000290541 GOLGB1Q14789 3259 aaKnown RBP19.25■□□□□ 0.67
PSMB4-201ENST00000290541 L3MBTL2Q969R5 705 aa19.25■□□□□ 0.67
PSMB4-201ENST00000290541 KDM2AQ9Y2K7 1162 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms