RNA–Protein interactions for RNA: ENST00000288839.6

SSX2B-201, Transcript of SSX family member 2B, humanhuman

TSL 3

Gene SSX2B, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2B-201ENST00000288839 IFT172Q9UG01 1749 aa9.93□□□□□ -0.82
SSX2B-201ENST00000288839 DCAF11Q8TEB1 546 aa9.92□□□□□ -0.82
SSX2B-201ENST00000288839 ASXL1Q8IXJ9 1541 aa9.92□□□□□ -0.82
SSX2B-201ENST00000288839 MSH6P52701 1360 aa9.91□□□□□ -0.82
SSX2B-201ENST00000288839 SPDYE2BA6NHP3 402 aa9.91□□□□□ -0.82
SSX2B-201ENST00000288839 SPDYE6P0CI01 402 aa9.91□□□□□ -0.82
SSX2B-201ENST00000288839 SPDYE2Q495Y8 402 aa9.91□□□□□ -0.82
SSX2B-201ENST00000288839 PIP4P2Q8N4L2 257 aa9.91□□□□□ -0.82
SSX2B-201ENST00000288839 AMOTL2Q9Y2J4 779 aa9.9□□□□□ -0.82
SSX2B-201ENST00000288839 MYOM2P54296 1465 aa9.9□□□□□ -0.83
SSX2B-201ENST00000288839 PIK3C2GO75747 1445 aa9.9□□□□□ -0.83
SSX2B-201ENST00000288839 COL16A1Q07092 1604 aaPredicted RBP9.89□□□□□ -0.83
SSX2B-201ENST00000288839 CFAP70Q5T0N1 1121 aa9.89□□□□□ -0.83
SSX2B-201ENST00000288839 TMEM132EQ6IEE7 984 aa9.89□□□□□ -0.83
SSX2B-201ENST00000288839 PHLPP1O60346 1717 aa9.89□□□□□ -0.83
SSX2B-201ENST00000288839 NRXN1Q9ULB1 1477 aa9.89□□□□□ -0.83
SSX2B-201ENST00000288839 FAM135BQ49AJ0 1406 aa9.89□□□□□ -0.83
SSX2B-201ENST00000288839 PIK3R4Q99570 1358 aa9.88□□□□□ -0.83
SSX2B-201ENST00000288839 C14orf37Q86TY3 774 aa9.88□□□□□ -0.83
SSX2B-201ENST00000288839 L3MBTL2Q969R5 705 aa9.88□□□□□ -0.83
SSX2B-201ENST00000288839 ZNF692Q9BU19 519 aaPredicted RBP9.88□□□□□ -0.83
SSX2B-201ENST00000288839 ROBO2Q9HCK4 1378 aa9.88□□□□□ -0.83
SSX2B-201ENST00000288839 C14orf93Q9H972 538 aaKnown RBP9.87□□□□□ -0.83
SSX2B-201ENST00000288839 STK26Q9P289 416 aa9.87□□□□□ -0.83
SSX2B-201ENST00000288839 MST1RQ04912 1400 aa9.86□□□□□ -0.83
SSX2B-201ENST00000288839 ADGRL3Q9HAR2 1447 aa9.86□□□□□ -0.83
SSX2B-201ENST00000288839 LRP6O75581 1613 aa9.85□□□□□ -0.83
SSX2B-201ENST00000288839 PTCH1Q13635 1447 aa9.85□□□□□ -0.83
SSX2B-201ENST00000288839 CCER1Q8TC90 406 aaPredicted RBP9.85□□□□□ -0.83
SSX2B-201ENST00000288839 STAC3Q96MF2 364 aa9.85□□□□□ -0.83
SSX2B-201ENST00000288839 SLAIN2Q9P270 581 aa9.85□□□□□ -0.83
SSX2B-201ENST00000288839 AHDC1Q5TGY3 1603 aaPredicted RBP9.85□□□□□ -0.83
SSX2B-201ENST00000288839 PITPNM1O00562 1244 aa9.84□□□□□ -0.83
SSX2B-201ENST00000288839 SSUH2Q9Y2M2 353 aa9.84□□□□□ -0.83
SSX2B-201ENST00000288839 LRPPRCP42704 1394 aaKnown RBP9.84□□□□□ -0.83
SSX2B-201ENST00000288839 PRAG1Q86YV5 1406 aa9.83□□□□□ -0.84
SSX2B-201ENST00000288839 NHSL1Q5SYE7 1610 aa9.83□□□□□ -0.84
SSX2B-201ENST00000288839 FXR2P51116 673 aaKnown RBP eCLIP9.83□□□□□ -0.84
SSX2B-201ENST00000288839 DDX17Q92841 729 aaKnown RBP9.83□□□□□ -0.84
SSX2B-201ENST00000288839 TONSLQ96HA7 1378 aa9.83□□□□□ -0.84
SSX2B-201ENST00000288839 PLEKHH1Q9ULM0 1364 aa9.83□□□□□ -0.84
SSX2B-201ENST00000288839 DCCP43146 1447 aa9.82□□□□□ -0.84
SSX2B-201ENST00000288839 YTHDC2Q9H6S0 1430 aaKnown RBP9.82□□□□□ -0.84
SSX2B-201ENST00000288839 NCOA3Q9Y6Q9 1424 aa9.82□□□□□ -0.84
SSX2B-201ENST00000288839 LAMC1P11047 1609 aa9.82□□□□□ -0.84
SSX2B-201ENST00000288839 NBPF1Q3BBV0 1214 aa9.82□□□□□ -0.84
SSX2B-201ENST00000288839 BRINP3Q76B58 766 aa9.82□□□□□ -0.84
SSX2B-201ENST00000288839 WAPLQ7Z5K2 1190 aa9.82□□□□□ -0.84
SSX2B-201ENST00000288839 ADGRB1O14514 1584 aa9.81□□□□□ -0.84
SSX2B-201ENST00000288839 ABCC11Q96J66 1382 aa9.81□□□□□ -0.84
SSX2B-201ENST00000288839 ATF3P18847 181 aa9.81□□□□□ -0.84
SSX2B-201ENST00000288839 NBPF8Q3BBV2 869 aa9.81□□□□□ -0.84
SSX2B-201ENST00000288839 C19orf44Q9H6X5 657 aa9.81□□□□□ -0.84
SSX2B-201ENST00000288839 RGS17Q9UGC6 210 aaPredicted RBP9.81□□□□□ -0.84
SSX2B-201ENST00000288839 TRAK1Q9UPV9 953 aa9.81□□□□□ -0.84
SSX2B-201ENST00000288839 KNDC1Q76NI1 1749 aa9.81□□□□□ -0.84
SSX2B-201ENST00000288839 SAFB2Q14151 953 aaKnown RBP eCLIP9.8□□□□□ -0.84
SSX2B-201ENST00000288839 CADPS2Q86UW7 1296 aa9.8□□□□□ -0.84
SSX2B-201ENST00000288839 TECPR2O15040 1411 aa9.8□□□□□ -0.84
SSX2B-201ENST00000288839 SHPRHQ149N8 1683 aa9.8□□□□□ -0.84
SSX2B-201ENST00000288839 CLSPNQ9HAW4 1339 aa9.8□□□□□ -0.84
SSX2B-201ENST00000288839 CDC42BPGQ6DT37 1551 aa9.8□□□□□ -0.84
SSX2B-201ENST00000288839 C1orf167Q5SNV9 1468 aa9.79□□□□□ -0.84
SSX2B-201ENST00000288839 PRAM1Q96QH2 718 aa9.79□□□□□ -0.84
SSX2B-201ENST00000288839 JCADQ9P266 1359 aa9.78□□□□□ -0.84
SSX2B-201ENST00000288839 SOCS7O14512 581 aa9.78□□□□□ -0.84
SSX2B-201ENST00000288839 KIAA1210Q9ULL0 1709 aa9.77□□□□□ -0.85
SSX2B-201ENST00000288839 HAX1O00165 279 aa9.77□□□□□ -0.85
SSX2B-201ENST00000288839 POGKQ9P215 609 aa9.77□□□□□ -0.85
SSX2B-201ENST00000288839 ROCK2O75116 1388 aaKnown RBP9.76□□□□□ -0.85
SSX2B-201ENST00000288839 TRPM1Q7Z4N2 1603 aa9.76□□□□□ -0.85
SSX2B-201ENST00000288839 NUTM2FA1L443 756 aa9.76□□□□□ -0.85
SSX2B-201ENST00000288839 POTEAQ6S8J7 498 aa9.76□□□□□ -0.85
SSX2B-201ENST00000288839 SIRT1Q96EB6 747 aa9.76□□□□□ -0.85
SSX2B-201ENST00000288839 ORAI2Q96SN7 254 aa9.76□□□□□ -0.85
SSX2B-201ENST00000288839 DLC1Q96QB1 1528 aa9.76□□□□□ -0.85
SSX2B-201ENST00000288839 FMN2Q9NZ56 1722 aa9.76□□□□□ -0.85
SSX2B-201ENST00000288839 SPDYE4A6NLX3 237 aa9.75□□□□□ -0.85
SSX2B-201ENST00000288839 HIRIP3Q9BW71 556 aaPredicted RBP9.75□□□□□ -0.85
SSX2B-201ENST00000288839 MINK1Q8N4C8 1332 aaPredicted RBP9.75□□□□□ -0.85
SSX2B-201ENST00000288839 XPCQ01831 940 aaPredicted RBP9.74□□□□□ -0.85
SSX2B-201ENST00000288839 CLEC11AQ9Y240 323 aa9.74□□□□□ -0.85
SSX2B-201ENST00000288839 PNPLA6Q8IY17 1366 aa9.74□□□□□ -0.85
SSX2B-201ENST00000288839 ARHGEF28Q8N1W1 1705 aaKnown RBP9.73□□□□□ -0.85
SSX2B-201ENST00000288839 RALGAPBQ86X10 1494 aa9.73□□□□□ -0.85
SSX2B-201ENST00000288839 NUTM2BA6NNL0 878 aaPredicted RBP9.73□□□□□ -0.85
SSX2B-201ENST00000288839 NUTM2EB1AL46 878 aaPredicted RBP9.73□□□□□ -0.85
SSX2B-201ENST00000288839 NUTM2AQ8IVF1 878 aaPredicted RBP9.73□□□□□ -0.85
SSX2B-201ENST00000288839 CARD11Q9BXL7 1154 aa9.73□□□□□ -0.85
SSX2B-201ENST00000288839 USP32Q8NFA0 1604 aa9.73□□□□□ -0.85
SSX2B-201ENST00000288839 PXDNQ92626 1479 aa9.72□□□□□ -0.85
SSX2B-201ENST00000288839 TIMELESSQ9UNS1 1208 aa9.72□□□□□ -0.85
SSX2B-201ENST00000288839 RGPD8O14715 1765 aaPredicted RBP9.72□□□□□ -0.85
SSX2B-201ENST00000288839 GPRASP1Q5JY77 1395 aa9.72□□□□□ -0.85
SSX2B-201ENST00000288839 CENPJQ9HC77 1338 aaPredicted RBP9.71□□□□□ -0.86
SSX2B-201ENST00000288839 MEX3CQ5U5Q3 659 aaKnown RBP9.7□□□□□ -0.86
SSX2B-201ENST00000288839 ADGRB2O60241 1585 aa9.7□□□□□ -0.86
SSX2B-201ENST00000288839 WASLO00401 505 aaPredicted RBP9.69□□□□□ -0.86
SSX2B-201ENST00000288839 ESCO1Q5FWF5 840 aa9.69□□□□□ -0.86
SSX2B-201ENST00000288839 SPATA31A6Q5VVP1 1343 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms