RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 PRAM1Q96QH2 718 aa13.71□□□□□ -0.21
C9orf43-201ENST00000288462 DNAJC5Q9H3Z4 198 aa13.71□□□□□ -0.21
C9orf43-201ENST00000288462 ARHGAP23Q9P227 1491 aa13.71□□□□□ -0.22
C9orf43-201ENST00000288462 ANKRD26Q9UPS8 1709 aa13.7□□□□□ -0.22
C9orf43-201ENST00000288462 ATAD2Q6PL18 1390 aa13.7□□□□□ -0.22
C9orf43-201ENST00000288462 SLC12A5Q9H2X9 1139 aa13.69□□□□□ -0.22
C9orf43-201ENST00000288462 SENP3Q9H4L4 574 aaPredicted RBP13.69□□□□□ -0.22
C9orf43-201ENST00000288462 METP08581 1390 aa13.69□□□□□ -0.22
C9orf43-201ENST00000288462 HDGFP51858 240 aaKnown RBP13.69□□□□□ -0.22
C9orf43-201ENST00000288462 ADAMTS13Q76LX8 1427 aa13.68□□□□□ -0.22
C9orf43-201ENST00000288462 PLEKHG1Q9ULL1 1385 aa13.68□□□□□ -0.22
C9orf43-201ENST00000288462 RIMS1Q86UR5 1692 aaKnown RBP13.68□□□□□ -0.22
C9orf43-201ENST00000288462 NSD2O96028 1365 aa13.68□□□□□ -0.22
C9orf43-201ENST00000288462 NEFLP07196 543 aa13.67□□□□□ -0.22
C9orf43-201ENST00000288462 SAFB2Q14151 953 aaKnown RBP eCLIP13.67□□□□□ -0.22
C9orf43-201ENST00000288462 POGKQ9P215 609 aa13.67□□□□□ -0.22
C9orf43-201ENST00000288462 FAM135BQ49AJ0 1406 aa13.67□□□□□ -0.22
C9orf43-201ENST00000288462 MED14O60244 1454 aa13.67□□□□□ -0.22
C9orf43-201ENST00000288462 CD163L1Q9NR16 1453 aa13.67□□□□□ -0.22
C9orf43-201ENST00000288462 CABP2Q9NPB3 220 aa13.67□□□□□ -0.22
C9orf43-201ENST00000288462 MINK1Q8N4C8 1332 aaPredicted RBP13.67□□□□□ -0.22
C9orf43-201ENST00000288462 SHPRHQ149N8 1683 aa13.67□□□□□ -0.22
C9orf43-201ENST00000288462 FKBP8Q14318 412 aa13.66□□□□□ -0.22
C9orf43-201ENST00000288462 ADAMTSL3P82987 1691 aa13.66□□□□□ -0.22
C9orf43-201ENST00000288462 A0A1W2PP64 1363 aa13.66□□□□□ -0.22
C9orf43-201ENST00000288462 PLEKHH1Q9ULM0 1364 aa13.66□□□□□ -0.22
C9orf43-201ENST00000288462 CEBPAP49715 358 aaPredicted RBP13.66□□□□□ -0.22
C9orf43-201ENST00000288462 ADGRB2O60241 1585 aa13.65□□□□□ -0.22
C9orf43-201ENST00000288462 DIP2AQ14689 1571 aa13.65□□□□□ -0.22
C9orf43-201ENST00000288462 KIF20BQ96Q89 1820 aa13.65□□□□□ -0.22
C9orf43-201ENST00000288462 ZNF142P52746 1687 aaPredicted RBP13.65□□□□□ -0.22
C9orf43-201ENST00000288462 CEP170BQ9Y4F5 1589 aaPredicted RBP13.64□□□□□ -0.23
C9orf43-201ENST00000288462 CGNL1Q0VF96 1302 aa13.64□□□□□ -0.23
C9orf43-201ENST00000288462 SRPK2P78362 688 aaKnown RBP13.64□□□□□ -0.23
C9orf43-201ENST00000288462 SIRT1Q96EB6 747 aa13.64□□□□□ -0.23
C9orf43-201ENST00000288462 NUDCQ9Y266 331 aa13.64□□□□□ -0.23
C9orf43-201ENST00000288462 ATP7BP35670 1465 aa13.64□□□□□ -0.23
C9orf43-201ENST00000288462 POLR3AO14802 1390 aaPredicted RBP13.63□□□□□ -0.23
C9orf43-201ENST00000288462 LTKP29376 864 aa13.61□□□□□ -0.23
C9orf43-201ENST00000288462 CDK19Q9BWU1 502 aa13.61□□□□□ -0.23
C9orf43-201ENST00000288462 WAPLQ7Z5K2 1190 aa13.61□□□□□ -0.23
C9orf43-201ENST00000288462 WDR43Q15061 677 aaKnown RBP eCLIP13.6□□□□□ -0.23
C9orf43-201ENST00000288462 ADAMTS8Q9UP79 889 aa13.6□□□□□ -0.23
C9orf43-201ENST00000288462 MON2Q7Z3U7 1717 aa13.6□□□□□ -0.23
C9orf43-201ENST00000288462 TOPAZ1Q8N9V7 1692 aa13.6□□□□□ -0.23
C9orf43-201ENST00000288462 AKAP12Q02952 1782 aa13.6□□□□□ -0.23
C9orf43-201ENST00000288462 XRN1Q8IZH2 1706 aaKnown RBP13.6□□□□□ -0.23
C9orf43-201ENST00000288462 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.6□□□□□ -0.23
C9orf43-201ENST00000288462 MORC1Q86VD1 984 aa13.6□□□□□ -0.23
C9orf43-201ENST00000288462 CDC42BPGQ6DT37 1551 aa13.59□□□□□ -0.23
C9orf43-201ENST00000288462 PDE3BQ13370 1112 aa13.59□□□□□ -0.23
C9orf43-201ENST00000288462 TERF2IPQ9NYB0 399 aa13.59□□□□□ -0.23
C9orf43-201ENST00000288462 ITSN1Q15811 1721 aa13.59□□□□□ -0.23
C9orf43-201ENST00000288462 ROBO2Q9HCK4 1378 aa13.59□□□□□ -0.23
C9orf43-201ENST00000288462 TXNDC2Q86VQ3 553 aa13.58□□□□□ -0.24
C9orf43-201ENST00000288462 EID1Q9Y6B2 187 aa13.58□□□□□ -0.24
C9orf43-201ENST00000288462 PTPRUQ92729 1446 aa13.58□□□□□ -0.24
C9orf43-201ENST00000288462 RNF123Q5XPI4 1314 aa13.57□□□□□ -0.24
C9orf43-201ENST00000288462 SENP3-EIF4A1A0A087X0R7 540 aa13.57□□□□□ -0.24
C9orf43-201ENST00000288462 PTCH1Q13635 1447 aa13.57□□□□□ -0.24
C9orf43-201ENST00000288462 WASLO00401 505 aaPredicted RBP13.57□□□□□ -0.24
C9orf43-201ENST00000288462 THEMISQ8N1K5 641 aaPredicted RBP13.57□□□□□ -0.24
C9orf43-201ENST00000288462 CPSF1Q10570 1443 aaKnown RBP13.56□□□□□ -0.24
C9orf43-201ENST00000288462 ERICH6BQ5W0A0 696 aa13.56□□□□□ -0.24
C9orf43-201ENST00000288462 HDGFL2Q7Z4V5 671 aaPredicted RBP13.55□□□□□ -0.24
C9orf43-201ENST00000288462 BCANQ96GW7 911 aa13.55□□□□□ -0.24
C9orf43-201ENST00000288462 PPIP5K1Q6PFW1 1433 aa13.55□□□□□ -0.24
C9orf43-201ENST00000288462 NRKQ7Z2Y5 1582 aa13.55□□□□□ -0.24
C9orf43-201ENST00000288462 CABP1Q9NZU7 370 aa13.54□□□□□ -0.24
C9orf43-201ENST00000288462 COL3A1P02461 1466 aaPredicted RBP13.54□□□□□ -0.24
C9orf43-201ENST00000288462 TBX22Q9Y458 520 aa13.54□□□□□ -0.24
C9orf43-201ENST00000288462 EDC4Q6P2E9 1401 aaKnown RBP13.53□□□□□ -0.24
C9orf43-201ENST00000288462 ZNF521Q96K83 1311 aa13.53□□□□□ -0.24
C9orf43-201ENST00000288462 IQSEC2Q5JU85 1478 aa13.53□□□□□ -0.24
C9orf43-201ENST00000288462 FYB1O15117 783 aa13.52□□□□□ -0.25
C9orf43-201ENST00000288462 PLPPR3Q6T4P5 718 aa13.52□□□□□ -0.25
C9orf43-201ENST00000288462 SETD1BQ9UPS6 1966 aaKnown RBP13.51□□□□□ -0.25
C9orf43-201ENST00000288462 TNNT2P45379 298 aaPredicted RBP13.51□□□□□ -0.25
C9orf43-201ENST00000288462 SALL2Q9Y467 1007 aaPredicted RBP13.51□□□□□ -0.25
C9orf43-201ENST00000288462 PIK3R4Q99570 1358 aa13.51□□□□□ -0.25
C9orf43-201ENST00000288462 MTHFSP49914 203 aa13.51□□□□□ -0.25
C9orf43-201ENST00000288462 IRX6P78412 446 aaPredicted RBP13.51□□□□□ -0.25
C9orf43-201ENST00000288462 SLC26A8Q96RN1 970 aa13.51□□□□□ -0.25
C9orf43-201ENST00000288462 NUDT16Q96DE0 195 aaKnown RBP13.5□□□□□ -0.25
C9orf43-201ENST00000288462 CFAP53Q96M91 514 aa13.5□□□□□ -0.25
C9orf43-201ENST00000288462 GGNBP2Q9H3C7 697 aa13.5□□□□□ -0.25
C9orf43-201ENST00000288462 PRR36Q9H6K5 1346 aa13.5□□□□□ -0.25
C9orf43-201ENST00000288462 NGEFQ8N5V2 710 aa13.49□□□□□ -0.25
C9orf43-201ENST00000288462 CDCA7LQ96GN5 454 aa13.49□□□□□ -0.25
C9orf43-201ENST00000288462 CHD2O14647 1828 aaKnown RBP13.49□□□□□ -0.25
C9orf43-201ENST00000288462 CCDC146Q8IYE0 955 aa13.48□□□□□ -0.25
C9orf43-201ENST00000288462 PELP1Q8IZL8 1130 aaKnown RBP13.48□□□□□ -0.25
C9orf43-201ENST00000288462 CCDC61Q9Y6R9 512 aa13.48□□□□□ -0.25
C9orf43-201ENST00000288462 NKTRP30414 1462 aaKnown RBP13.48□□□□□ -0.25
C9orf43-201ENST00000288462 AMOTL2Q9Y2J4 779 aa13.47□□□□□ -0.25
C9orf43-201ENST00000288462 FMN2Q9NZ56 1722 aa13.47□□□□□ -0.25
C9orf43-201ENST00000288462 PNPLA6Q8IY17 1366 aa13.46□□□□□ -0.25
C9orf43-201ENST00000288462 NALCNQ8IZF0 1738 aa13.46□□□□□ -0.25
C9orf43-201ENST00000288462 MAP2P11137 1827 aaKnown RBP13.46□□□□□ -0.25
C9orf43-201ENST00000288462 APAF1O14727 1248 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms