RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 RRP1P56182 461 aaKnown RBP13.81□□□□□ -0.2
ERCC3-201ENST00000285398 STAC3Q96MF2 364 aa13.81□□□□□ -0.2
ERCC3-201ENST00000285398 KCNA4P22459 653 aa13.8□□□□□ -0.2
ERCC3-201ENST00000285398 TXNDC2Q86VQ3 553 aa13.8□□□□□ -0.2
ERCC3-201ENST00000285398 PODXL2Q9NZ53 605 aa13.8□□□□□ -0.2
ERCC3-201ENST00000285398 NRXN1Q9ULB1 1477 aa13.8□□□□□ -0.2
ERCC3-201ENST00000285398 TULP1O00294 542 aaPredicted RBP13.79□□□□□ -0.2
ERCC3-201ENST00000285398 SLC26A8Q96RN1 970 aa13.79□□□□□ -0.2
ERCC3-201ENST00000285398 TESK2Q96S53 571 aa13.79□□□□□ -0.2
ERCC3-201ENST00000285398 TMEM2Q9UHN6 1383 aa13.79□□□□□ -0.2
ERCC3-201ENST00000285398 KDM4FA0A1W2PPD8 638 aa13.77□□□□□ -0.2
ERCC3-201ENST00000285398 EXOC6Q8TAG9 804 aa13.77□□□□□ -0.2
ERCC3-201ENST00000285398 TMC1Q8TDI8 760 aa13.77□□□□□ -0.2
ERCC3-201ENST00000285398 RSPH6AQ9H0K4 717 aa13.77□□□□□ -0.2
ERCC3-201ENST00000285398 DISP3Q9P2K9 1392 aa13.77□□□□□ -0.2
ERCC3-201ENST00000285398 PTPRMP28827 1452 aa13.77□□□□□ -0.21
ERCC3-201ENST00000285398 ZFYVE9O95405 1425 aa13.77□□□□□ -0.21
ERCC3-201ENST00000285398 NLRP1Q9C000 1473 aa13.77□□□□□ -0.21
ERCC3-201ENST00000285398 NFKBIBQ15653 356 aa13.77□□□□□ -0.21
ERCC3-201ENST00000285398 BRD4O60885 1362 aaPredicted RBP13.76□□□□□ -0.21
ERCC3-201ENST00000285398 UBR1Q8IWV7 1749 aa13.76□□□□□ -0.21
ERCC3-201ENST00000285398 SCAF11Q99590 1463 aaKnown RBP13.76□□□□□ -0.21
ERCC3-201ENST00000285398 KTN1Q86UP2 1357 aaKnown RBP13.75□□□□□ -0.21
ERCC3-201ENST00000285398 THEMISQ8N1K5 641 aaPredicted RBP13.75□□□□□ -0.21
ERCC3-201ENST00000285398 RCAN3Q9UKA8 241 aa13.75□□□□□ -0.21
ERCC3-201ENST00000285398 METP08581 1390 aa13.74□□□□□ -0.21
ERCC3-201ENST00000285398 ADGRB1O14514 1584 aa13.74□□□□□ -0.21
ERCC3-201ENST00000285398 MYO3AQ8NEV4 1616 aa13.74□□□□□ -0.21
ERCC3-201ENST00000285398 FRAT1Q92837 279 aaPredicted RBP13.74□□□□□ -0.21
ERCC3-201ENST00000285398 WAPLQ7Z5K2 1190 aa13.73□□□□□ -0.21
ERCC3-201ENST00000285398 EID1Q9Y6B2 187 aa13.73□□□□□ -0.21
ERCC3-201ENST00000285398 ASXL1Q8IXJ9 1541 aa13.73□□□□□ -0.21
ERCC3-201ENST00000285398 HSPA2P54652 639 aa13.72□□□□□ -0.21
ERCC3-201ENST00000285398 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.72□□□□□ -0.21
ERCC3-201ENST00000285398 FAM43AQ8N2R8 423 aa13.72□□□□□ -0.21
ERCC3-201ENST00000285398 PRAM1Q96QH2 718 aa13.72□□□□□ -0.21
ERCC3-201ENST00000285398 MYBBP1AQ9BQG0 1328 aaKnown RBP13.72□□□□□ -0.21
ERCC3-201ENST00000285398 SENP3-EIF4A1A0A087X0R7 540 aa13.71□□□□□ -0.21
ERCC3-201ENST00000285398 CENPJQ9HC77 1338 aaPredicted RBP13.71□□□□□ -0.21
ERCC3-201ENST00000285398 ALKQ9UM73 1620 aa13.71□□□□□ -0.21
ERCC3-201ENST00000285398 MINK1Q8N4C8 1332 aaPredicted RBP13.71□□□□□ -0.22
ERCC3-201ENST00000285398 TMF1P82094 1093 aa13.71□□□□□ -0.22
ERCC3-201ENST00000285398 CEP170BQ9Y4F5 1589 aaPredicted RBP13.7□□□□□ -0.22
ERCC3-201ENST00000285398 HDGFP51858 240 aaKnown RBP13.7□□□□□ -0.22
ERCC3-201ENST00000285398 PDE3BQ13370 1112 aa13.7□□□□□ -0.22
ERCC3-201ENST00000285398 RALBP1Q15311 655 aa13.7□□□□□ -0.22
ERCC3-201ENST00000285398 KIAA1210Q9ULL0 1709 aa13.7□□□□□ -0.22
ERCC3-201ENST00000285398 IQGAP1P46940 1657 aa13.69□□□□□ -0.22
ERCC3-201ENST00000285398 RBM33Q96EV2 1170 aaKnown RBP13.69□□□□□ -0.22
ERCC3-201ENST00000285398 POGKQ9P215 609 aa13.69□□□□□ -0.22
ERCC3-201ENST00000285398 YTHDC2Q9H6S0 1430 aaKnown RBP13.69□□□□□ -0.22
ERCC3-201ENST00000285398 EIF3AQ14152 1382 aaKnown RBP13.69□□□□□ -0.22
ERCC3-201ENST00000285398 KDM5AP29375 1690 aaKnown RBP13.69□□□□□ -0.22
ERCC3-201ENST00000285398 LAMC1P11047 1609 aa13.68□□□□□ -0.22
ERCC3-201ENST00000285398 PLEKHH1Q9ULM0 1364 aa13.68□□□□□ -0.22
ERCC3-201ENST00000285398 SETD1BQ9UPS6 1966 aaKnown RBP13.68□□□□□ -0.22
ERCC3-201ENST00000285398 NCKAP5LQ9HCH0 1330 aa13.67□□□□□ -0.22
ERCC3-201ENST00000285398 ADAMTS13Q76LX8 1427 aa13.67□□□□□ -0.22
ERCC3-201ENST00000285398 NRXN3Q9Y4C0 1643 aa13.67□□□□□ -0.22
ERCC3-201ENST00000285398 CABP2Q9NPB3 220 aa13.66□□□□□ -0.22
ERCC3-201ENST00000285398 ARHGAP23Q9P227 1491 aa13.66□□□□□ -0.22
ERCC3-201ENST00000285398 SETBP1Q9Y6X0 1596 aa13.66□□□□□ -0.22
ERCC3-201ENST00000285398 ANKLE2Q86XL3 938 aa13.66□□□□□ -0.22
ERCC3-201ENST00000285398 SLIT1O75093 1534 aa13.66□□□□□ -0.22
ERCC3-201ENST00000285398 PLEKHG1Q9ULL1 1385 aa13.65□□□□□ -0.22
ERCC3-201ENST00000285398 PANK3Q9H999 370 aa13.65□□□□□ -0.22
ERCC3-201ENST00000285398 NUTM2FA1L443 756 aa13.64□□□□□ -0.23
ERCC3-201ENST00000285398 PARD3Q8TEW0 1356 aa13.63□□□□□ -0.23
ERCC3-201ENST00000285398 NLRP13Q86W25 1043 aa13.63□□□□□ -0.23
ERCC3-201ENST00000285398 AMOTL2Q9Y2J4 779 aa13.63□□□□□ -0.23
ERCC3-201ENST00000285398 INSRP06213 1382 aa13.62□□□□□ -0.23
ERCC3-201ENST00000285398 SRPK2P78362 688 aaKnown RBP13.62□□□□□ -0.23
ERCC3-201ENST00000285398 GLIPR1L2Q4G1C9 344 aa13.62□□□□□ -0.23
ERCC3-201ENST00000285398 SLC12A5Q9H2X9 1139 aa13.62□□□□□ -0.23
ERCC3-201ENST00000285398 ROBO2Q9HCK4 1378 aa13.62□□□□□ -0.23
ERCC3-201ENST00000285398 ZNF142P52746 1687 aaPredicted RBP13.62□□□□□ -0.23
ERCC3-201ENST00000285398 SLC4A3P48751 1232 aa13.62□□□□□ -0.23
ERCC3-201ENST00000285398 SETD1AO15047 1707 aaKnown RBP13.62□□□□□ -0.23
ERCC3-201ENST00000285398 PTPRUQ92729 1446 aa13.62□□□□□ -0.23
ERCC3-201ENST00000285398 KCNA6P17658 529 aa13.61□□□□□ -0.23
ERCC3-201ENST00000285398 ARHGEF28Q8N1W1 1705 aaKnown RBP13.6□□□□□ -0.23
ERCC3-201ENST00000285398 CC2D1BQ5T0F9 858 aaKnown RBP13.6□□□□□ -0.23
ERCC3-201ENST00000285398 BLMP54132 1417 aaPredicted RBP13.59□□□□□ -0.23
ERCC3-201ENST00000285398 FRAT2O75474 233 aaPredicted RBP13.59□□□□□ -0.23
ERCC3-201ENST00000285398 FAM161AQ3B820 660 aa13.59□□□□□ -0.23
ERCC3-201ENST00000285398 QRICH2Q9H0J4 1663 aa13.59□□□□□ -0.23
ERCC3-201ENST00000285398 ABCC11Q96J66 1382 aa13.59□□□□□ -0.23
ERCC3-201ENST00000285398 TBX22Q9Y458 520 aa13.59□□□□□ -0.23
ERCC3-201ENST00000285398 AEBP2Q6ZN18 517 aaPredicted RBP13.58□□□□□ -0.24
ERCC3-201ENST00000285398 CDCA7LQ96GN5 454 aa13.58□□□□□ -0.24
ERCC3-201ENST00000285398 CRBNQ96SW2 442 aa13.58□□□□□ -0.24
ERCC3-201ENST00000285398 CDK19Q9BWU1 502 aa13.58□□□□□ -0.24
ERCC3-201ENST00000285398 MED14O60244 1454 aa13.58□□□□□ -0.24
ERCC3-201ENST00000285398 EVC2Q86UK5 1308 aa13.58□□□□□ -0.24
ERCC3-201ENST00000285398 PKNOX2Q96KN3 472 aa13.58□□□□□ -0.24
ERCC3-201ENST00000285398 CENPQQ7L2Z9 268 aaPredicted RBP13.57□□□□□ -0.24
ERCC3-201ENST00000285398 KDM2BQ8NHM5 1336 aa13.57□□□□□ -0.24
ERCC3-201ENST00000285398 PER1O15534 1290 aaPredicted RBP13.57□□□□□ -0.24
ERCC3-201ENST00000285398 CDCA8Q53HL2 280 aa13.57□□□□□ -0.24
ERCC3-201ENST00000285398 TULP4Q9NRJ4 1543 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms