RNA–Protein interactions for RNA: ENST00000270361.15

CAPN10-201, Transcript of calpain 10, humanhuman

TSL 1 (best)

Gene CAPN10, Length 2,453 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-201ENST00000270361 RTN4Q9NQC3 1192 aaKnown RBP27.23■■□□□ 1.95
CAPN10-201ENST00000270361 NOS1P29475 1434 aa27.23■■□□□ 1.95
CAPN10-201ENST00000270361 PHF23Q9BUL5 403 aaPredicted RBP27.23■■□□□ 1.95
CAPN10-201ENST00000270361 PANK1Q8TE04 598 aa27.22■■□□□ 1.95
CAPN10-201ENST00000270361 PPRC1Q5VV67 1664 aaKnown RBP27.22■■□□□ 1.95
CAPN10-201ENST00000270361 MROH2AA6NES4 1674 aa27.21■■□□□ 1.95
CAPN10-201ENST00000270361 RARSP54136 660 aaKnown RBP27.21■■□□□ 1.95
CAPN10-201ENST00000270361 CCDC27Q2M243 656 aa27.21■■□□□ 1.95
CAPN10-201ENST00000270361 CFAP53Q96M91 514 aa27.21■■□□□ 1.95
CAPN10-201ENST00000270361 SHPRHQ149N8 1683 aa27.2■■□□□ 1.95
CAPN10-201ENST00000270361 C14orf93Q9H972 538 aaKnown RBP27.2■■□□□ 1.94
CAPN10-201ENST00000270361 IQSEC2Q5JU85 1478 aa27.2■■□□□ 1.94
CAPN10-201ENST00000270361 BECN1Q14457 450 aa27.19■■□□□ 1.94
CAPN10-201ENST00000270361 TCP11L2Q8N4U5 519 aa27.19■■□□□ 1.94
CAPN10-201ENST00000270361 USP32Q8NFA0 1604 aa27.19■■□□□ 1.94
CAPN10-201ENST00000270361 FRAT2O75474 233 aaPredicted RBP27.18■■□□□ 1.94
CAPN10-201ENST00000270361 PUS7Q96PZ0 661 aaKnown RBP27.18■■□□□ 1.94
CAPN10-201ENST00000270361 BRPF3Q9ULD4 1205 aa27.18■■□□□ 1.94
CAPN10-201ENST00000270361 USP19O94966 1318 aa27.17■■□□□ 1.94
CAPN10-201ENST00000270361 RPGRIP1LQ68CZ1 1315 aa27.17■■□□□ 1.94
CAPN10-201ENST00000270361 ANO8Q9HCE9 1232 aaPredicted RBP27.16■■□□□ 1.94
CAPN10-201ENST00000270361 TRAK1Q9UPV9 953 aa27.16■■□□□ 1.94
CAPN10-201ENST00000270361 SLC12A5Q9H2X9 1139 aa27.16■■□□□ 1.94
CAPN10-201ENST00000270361 ZNF518AQ6AHZ1 1483 aa27.15■■□□□ 1.94
CAPN10-201ENST00000270361 NEUROD2Q15784 382 aa27.15■■□□□ 1.94
CAPN10-201ENST00000270361 ZC3H13Q5T200 1668 aaKnown RBP27.14■■□□□ 1.94
CAPN10-201ENST00000270361 KIDINS220Q9ULH0 1771 aa27.14■■□□□ 1.93
CAPN10-201ENST00000270361 CHGAP10645 457 aaKnown RBP27.14■■□□□ 1.93
CAPN10-201ENST00000270361 MYH16Q9H6N6 1097 aa27.14■■□□□ 1.93
CAPN10-201ENST00000270361 UPF2Q9HAU5 1272 aaKnown RBP27.14■■□□□ 1.93
CAPN10-201ENST00000270361 NSD2O96028 1365 aa27.14■■□□□ 1.93
CAPN10-201ENST00000270361 QRICH2Q9H0J4 1663 aa27.14■■□□□ 1.93
CAPN10-201ENST00000270361 ADGRB1O14514 1584 aa27.13■■□□□ 1.93
CAPN10-201ENST00000270361 TNNT2P45379 298 aaPredicted RBP27.12■■□□□ 1.93
CAPN10-201ENST00000270361 RRP7AQ9Y3A4 280 aaKnown RBP27.12■■□□□ 1.93
CAPN10-201ENST00000270361 MTHFSP49914 203 aa27.11■■□□□ 1.93
CAPN10-201ENST00000270361 RWDD1Q9H446 243 aaPredicted RBP27.1■■□□□ 1.93
CAPN10-201ENST00000270361 PPLO60437 1756 aa27.09■■□□□ 1.93
CAPN10-201ENST00000270361 NPATQ14207 1427 aa27.08■■□□□ 1.93
CAPN10-201ENST00000270361 CT47B1P0C2W7 299 aaPredicted RBP27.08■■□□□ 1.93
CAPN10-201ENST00000270361 EVC2Q86UK5 1308 aa27.07■■□□□ 1.92
CAPN10-201ENST00000270361 ASXL2Q76L83 1435 aa27.07■■□□□ 1.92
CAPN10-201ENST00000270361 PCDHB15Q9Y5E8 787 aa27.07■■□□□ 1.92
CAPN10-201ENST00000270361 SEC24BO95487 1268 aa27.06■■□□□ 1.92
CAPN10-201ENST00000270361 ANKRD36BQ8N2N9 1353 aa27.06■■□□□ 1.92
CAPN10-201ENST00000270361 NLRP1Q9C000 1473 aa27.05■■□□□ 1.92
CAPN10-201ENST00000270361 RLBP1P12271 317 aa27.05■■□□□ 1.92
CAPN10-201ENST00000270361 TMEM132EQ6IEE7 984 aa27.02■■□□□ 1.92
CAPN10-201ENST00000270361 PDZRN3Q9UPQ7 1066 aa27.02■■□□□ 1.92
CAPN10-201ENST00000270361 MVPQ14764 893 aaKnown RBP27.01■■□□□ 1.92
CAPN10-201ENST00000270361 ZKSCAN2Q63HK3 967 aa27.01■■□□□ 1.91
CAPN10-201ENST00000270361 TBC1D32Q96NH3 1257 aa27.01■■□□□ 1.91
CAPN10-201ENST00000270361 U2AF1L5P0DN76 240 aaPredicted RBP27■■□□□ 1.91
CAPN10-201ENST00000270361 U2AF1Q01081 240 aaKnown RBP eCLIP27■■□□□ 1.91
CAPN10-201ENST00000270361 MLH3Q9UHC1 1453 aa26.99■■□□□ 1.91
CAPN10-201ENST00000270361 VGFO15240 615 aaPredicted RBP26.99■■□□□ 1.91
CAPN10-201ENST00000270361 BCL2L13Q9BXK5 485 aa26.99■■□□□ 1.91
CAPN10-201ENST00000270361 ADGRB2O60241 1585 aa26.98■■□□□ 1.91
CAPN10-201ENST00000270361 FTSJ3Q8IY81 847 aaKnown RBP26.98■■□□□ 1.91
CAPN10-201ENST00000270361 GLI2P10070 1586 aa26.97■■□□□ 1.91
CAPN10-201ENST00000270361 GGT6Q6P531 493 aa26.97■■□□□ 1.91
CAPN10-201ENST00000270361 CFAP74Q9C0B2 1584 aa26.97■■□□□ 1.91
CAPN10-201ENST00000270361 POGZQ7Z3K3 1410 aa26.96■■□□□ 1.91
CAPN10-201ENST00000270361 DZIP1LQ8IYY4 767 aaKnown RBP26.96■■□□□ 1.91
CAPN10-201ENST00000270361 HECW2Q9P2P5 1572 aa26.96■■□□□ 1.91
CAPN10-201ENST00000270361 TNNQ9UQP3 1299 aa26.95■■□□□ 1.91
CAPN10-201ENST00000270361 TULP4Q9NRJ4 1543 aa26.94■■□□□ 1.9
CAPN10-201ENST00000270361 FRMPD1Q5SYB0 1578 aa26.94■■□□□ 1.9
CAPN10-201ENST00000270361 ANTXR1Q9H6X2 564 aa26.93■■□□□ 1.9
CAPN10-201ENST00000270361 ABCC3O15438 1527 aa26.93■■□□□ 1.9
CAPN10-201ENST00000270361 FAM43AQ8N2R8 423 aa26.92■■□□□ 1.9
CAPN10-201ENST00000270361 SLKQ9H2G2 1235 aaPredicted RBP26.92■■□□□ 1.9
CAPN10-201ENST00000270361 ARHGEF28Q8N1W1 1705 aaKnown RBP26.9■■□□□ 1.9
CAPN10-201ENST00000270361 ABCC11Q96J66 1382 aa26.9■■□□□ 1.9
CAPN10-201ENST00000270361 DDX19BQ9UMR2 479 aa26.9■■□□□ 1.9
CAPN10-201ENST00000270361 IL16Q14005 1332 aa26.89■■□□□ 1.9
CAPN10-201ENST00000270361 HDAC1Q13547 482 aaPredicted RBP26.89■■□□□ 1.9
CAPN10-201ENST00000270361 SMC4Q9NTJ3 1288 aa26.89■■□□□ 1.9
CAPN10-201ENST00000270361 TBC1D2Q9BYX2 928 aa26.89■■□□□ 1.89
CAPN10-201ENST00000270361 POGKQ9P215 609 aa26.88■■□□□ 1.89
CAPN10-201ENST00000270361 NPM1P06748 294 aaKnown RBP eCLIP26.88■■□□□ 1.89
CAPN10-201ENST00000270361 CD109Q6YHK3 1445 aa26.87■■□□□ 1.89
CAPN10-201ENST00000270361 CAMSAP1Q5T5Y3 1602 aa26.87■■□□□ 1.89
CAPN10-201ENST00000270361 CABP2Q9NPB3 220 aa26.87■■□□□ 1.89
CAPN10-201ENST00000270361 NEXMIFQ5QGS0 1516 aa26.86■■□□□ 1.89
CAPN10-201ENST00000270361 TMPOP42166 694 aaKnown RBP26.86■■□□□ 1.89
CAPN10-201ENST00000270361 L1TD1Q5T7N2 865 aaKnown RBP26.86■■□□□ 1.89
CAPN10-201ENST00000270361 PLEKHF1Q96S99 279 aa26.86■■□□□ 1.89
CAPN10-201ENST00000270361 PIK3C2BO00750 1634 aa26.86■■□□□ 1.89
CAPN10-201ENST00000270361 PNNQ9H307 717 aaKnown RBP26.85■■□□□ 1.89
CAPN10-201ENST00000270361 ZFYVE9O95405 1425 aa26.85■■□□□ 1.89
CAPN10-201ENST00000270361 EXOSC9Q06265 439 aaKnown RBP26.84■■□□□ 1.89
CAPN10-201ENST00000270361 CFAP65Q6ZU64 1925 aaKnown RBP26.84■■□□□ 1.89
CAPN10-201ENST00000270361 ATF7IPQ6VMQ6 1270 aa26.84■■□□□ 1.89
CAPN10-201ENST00000270361 TSR2Q969E8 191 aaKnown RBP26.84■■□□□ 1.89
CAPN10-201ENST00000270361 A0A1W2PP64 1363 aa26.84■■□□□ 1.89
CAPN10-201ENST00000270361 U2SURPO15042 1029 aaKnown RBP26.83■■□□□ 1.89
CAPN10-201ENST00000270361 TRIM27P14373 513 aa26.83■■□□□ 1.89
CAPN10-201ENST00000270361 MED14O60244 1454 aa26.82■■□□□ 1.88
CAPN10-201ENST00000270361 ATAD2Q6PL18 1390 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms