RNA–Protein interactions for RNA: ENST00000269886.7

SH3GL1-201, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL1, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-201ENST00000269886 RPGRIP1LQ68CZ1 1315 aa31.28■■■□□ 2.6
SH3GL1-201ENST00000269886 CFAP74Q9C0B2 1584 aa31.28■■■□□ 2.6
SH3GL1-201ENST00000269886 LAS1LQ9Y4W2 734 aaKnown RBP31.28■■■□□ 2.6
SH3GL1-201ENST00000269886 RAPGEF3O95398 923 aa31.27■■■□□ 2.6
SH3GL1-201ENST00000269886 RIMBP3CA6NJZ7 1639 aa31.27■■■□□ 2.6
SH3GL1-201ENST00000269886 RIMBP3BA6NNM3 1639 aa31.27■■■□□ 2.6
SH3GL1-201ENST00000269886 RIMBP3Q9UFD9 1639 aa31.27■■■□□ 2.6
SH3GL1-201ENST00000269886 RRP7AQ9Y3A4 280 aaKnown RBP31.27■■■□□ 2.6
SH3GL1-201ENST00000269886 SHPRHQ149N8 1683 aa31.26■■■□□ 2.59
SH3GL1-201ENST00000269886 CYB5RLQ6IPT4 315 aa31.24■■■□□ 2.59
SH3GL1-201ENST00000269886 RGS3P49796 1198 aa31.24■■■□□ 2.59
SH3GL1-201ENST00000269886 SIGLEC1Q9BZZ2 1709 aa31.22■■■□□ 2.59
SH3GL1-201ENST00000269886 MTHFSP49914 203 aa31.22■■■□□ 2.59
SH3GL1-201ENST00000269886 RUNDC1Q96C34 613 aa31.22■■■□□ 2.59
SH3GL1-201ENST00000269886 C8orf34Q49A92 452 aa31.21■■■□□ 2.59
SH3GL1-201ENST00000269886 FAM161AQ3B820 660 aa31.21■■■□□ 2.59
SH3GL1-201ENST00000269886 TCP11L2Q8N4U5 519 aa31.21■■■□□ 2.59
SH3GL1-201ENST00000269886 CGNL1Q0VF96 1302 aa31.2■■■□□ 2.59
SH3GL1-201ENST00000269886 CAMSAP1Q5T5Y3 1602 aa31.2■■■□□ 2.59
SH3GL1-201ENST00000269886 GLI2P10070 1586 aa31.19■■■□□ 2.58
SH3GL1-201ENST00000269886 SENP3Q9H4L4 574 aaPredicted RBP31.19■■■□□ 2.58
SH3GL1-201ENST00000269886 DDRGK1Q96HY6 314 aa31.18■■■□□ 2.58
SH3GL1-201ENST00000269886 VGFO15240 615 aaPredicted RBP31.18■■■□□ 2.58
SH3GL1-201ENST00000269886 IGHDP01880 384 aa31.17■■■□□ 2.58
SH3GL1-201ENST00000269886 PANK1Q8TE04 598 aa31.17■■■□□ 2.58
SH3GL1-201ENST00000269886 EVC2Q86UK5 1308 aa31.17■■■□□ 2.58
SH3GL1-201ENST00000269886 CANXP27824 592 aaKnown RBP31.16■■■□□ 2.58
SH3GL1-201ENST00000269886 SAFB2Q14151 953 aaKnown RBP eCLIP31.16■■■□□ 2.58
SH3GL1-201ENST00000269886 PDE3AQ14432 1141 aa31.16■■■□□ 2.58
SH3GL1-201ENST00000269886 CABP2Q9NPB3 220 aa31.15■■■□□ 2.58
SH3GL1-201ENST00000269886 COG6Q9Y2V7 657 aa31.15■■■□□ 2.58
SH3GL1-201ENST00000269886 TULP4Q9NRJ4 1543 aa31.15■■■□□ 2.58
SH3GL1-201ENST00000269886 NEXMIFQ5QGS0 1516 aa31.14■■■□□ 2.58
SH3GL1-201ENST00000269886 IQSEC2Q5JU85 1478 aa31.14■■■□□ 2.58
SH3GL1-201ENST00000269886 USP32Q8NFA0 1604 aa31.13■■■□□ 2.57
SH3GL1-201ENST00000269886 NEFMP07197 916 aa31.13■■■□□ 2.57
SH3GL1-201ENST00000269886 FRAT1Q92837 279 aaPredicted RBP31.13■■■□□ 2.57
SH3GL1-201ENST00000269886 PIK3C2BO00750 1634 aa31.12■■■□□ 2.57
SH3GL1-201ENST00000269886 IDI1Q13907 227 aa31.12■■■□□ 2.57
SH3GL1-201ENST00000269886 PHF23Q9BUL5 403 aaPredicted RBP31.12■■■□□ 2.57
SH3GL1-201ENST00000269886 ARHGEF28Q8N1W1 1705 aaKnown RBP31.12■■■□□ 2.57
SH3GL1-201ENST00000269886 CFAP53Q96M91 514 aa31.12■■■□□ 2.57
SH3GL1-201ENST00000269886 SLC4A3P48751 1232 aa31.11■■■□□ 2.57
SH3GL1-201ENST00000269886 ANKRD36BQ8N2N9 1353 aa31.11■■■□□ 2.57
SH3GL1-201ENST00000269886 RARSP54136 660 aaKnown RBP31.09■■■□□ 2.57
SH3GL1-201ENST00000269886 CLUAP1Q96AJ1 413 aa31.09■■■□□ 2.57
SH3GL1-201ENST00000269886 PUS7Q96PZ0 661 aaKnown RBP31.08■■■□□ 2.57
SH3GL1-201ENST00000269886 STK26Q9P289 416 aa31.08■■■□□ 2.57
SH3GL1-201ENST00000269886 DIP2CQ9Y2E4 1556 aa31.08■■■□□ 2.57
SH3GL1-201ENST00000269886 NEO1Q92859 1461 aa31.08■■■□□ 2.57
SH3GL1-201ENST00000269886 NINLQ9Y2I6 1382 aa31.07■■■□□ 2.56
SH3GL1-201ENST00000269886 WDR63Q8IWG1 891 aa31.07■■■□□ 2.56
SH3GL1-201ENST00000269886 PPM1GO15355 546 aaPredicted RBP31.05■■■□□ 2.56
SH3GL1-201ENST00000269886 U2AF1L5P0DN76 240 aaPredicted RBP31.05■■■□□ 2.56
SH3GL1-201ENST00000269886 U2AF1Q01081 240 aaKnown RBP eCLIP31.05■■■□□ 2.56
SH3GL1-201ENST00000269886 BCL2L13Q9BXK5 485 aa31.04■■■□□ 2.56
SH3GL1-201ENST00000269886 TNNQ9UQP3 1299 aa31.04■■■□□ 2.56
SH3GL1-201ENST00000269886 NSD2O96028 1365 aa31.02■■■□□ 2.56
SH3GL1-201ENST00000269886 CCDC27Q2M243 656 aa31.01■■■□□ 2.56
SH3GL1-201ENST00000269886 ARHGAP31Q2M1Z3 1444 aa31.01■■■□□ 2.55
SH3GL1-201ENST00000269886 RLBP1P12271 317 aa31■■■□□ 2.55
SH3GL1-201ENST00000269886 SRPK2P78362 688 aaKnown RBP31■■■□□ 2.55
SH3GL1-201ENST00000269886 USP35Q9P2H5 1018 aa31■■■□□ 2.55
SH3GL1-201ENST00000269886 YEATS2Q9ULM3 1422 aa31■■■□□ 2.55
SH3GL1-201ENST00000269886 A0A1W2PP64 1363 aa30.99■■■□□ 2.55
SH3GL1-201ENST00000269886 DAXXQ9UER7 740 aaPredicted RBP30.98■■■□□ 2.55
SH3GL1-201ENST00000269886 GGNBP2Q9H3C7 697 aa30.97■■■□□ 2.55
SH3GL1-201ENST00000269886 SLC52A1Q9NWF4 448 aa30.97■■■□□ 2.55
SH3GL1-201ENST00000269886 ZFYVE9O95405 1425 aa30.94■■■□□ 2.54
SH3GL1-201ENST00000269886 MINK1Q8N4C8 1332 aaPredicted RBP30.94■■■□□ 2.54
SH3GL1-201ENST00000269886 ABCC11Q96J66 1382 aa30.94■■■□□ 2.54
SH3GL1-201ENST00000269886 RICTORQ6R327 1708 aa30.94■■■□□ 2.54
SH3GL1-201ENST00000269886 MYH16Q9H6N6 1097 aa30.94■■■□□ 2.54
SH3GL1-201ENST00000269886 MYO5BQ9ULV0 1848 aa30.94■■■□□ 2.54
SH3GL1-201ENST00000269886 PCDHB15Q9Y5E8 787 aa30.93■■■□□ 2.54
SH3GL1-201ENST00000269886 U2SURPO15042 1029 aaKnown RBP30.92■■■□□ 2.54
SH3GL1-201ENST00000269886 PRAM1Q96QH2 718 aa30.91■■■□□ 2.54
SH3GL1-201ENST00000269886 MAPK8IP3Q9UPT6 1336 aa30.9■■■□□ 2.54
SH3GL1-201ENST00000269886 PTPRMP28827 1452 aa30.89■■■□□ 2.54
SH3GL1-201ENST00000269886 TSR2Q969E8 191 aaKnown RBP30.89■■■□□ 2.54
SH3GL1-201ENST00000269886 FBXO31Q5XUX0 539 aaPredicted RBP30.88■■■□□ 2.53
SH3GL1-201ENST00000269886 ADGRB2O60241 1585 aa30.88■■■□□ 2.53
SH3GL1-201ENST00000269886 POGKQ9P215 609 aa30.88■■■□□ 2.53
SH3GL1-201ENST00000269886 FYB1O15117 783 aa30.87■■■□□ 2.53
SH3GL1-201ENST00000269886 NCBP3Q53F19 620 aaKnown RBP30.87■■■□□ 2.53
SH3GL1-201ENST00000269886 PMFBP1Q8TBY8 1022 aa30.87■■■□□ 2.53
SH3GL1-201ENST00000269886 TMEM131LA2VDJ0 1609 aa30.87■■■□□ 2.53
SH3GL1-201ENST00000269886 SEC24BO95487 1268 aa30.87■■■□□ 2.53
SH3GL1-201ENST00000269886 PLEKHF1Q96S99 279 aa30.87■■■□□ 2.53
SH3GL1-201ENST00000269886 DIP2BQ9P265 1576 aa30.87■■■□□ 2.53
SH3GL1-201ENST00000269886 USP19O94966 1318 aa30.86■■■□□ 2.53
SH3GL1-201ENST00000269886 NFKBIBQ15653 356 aa30.86■■■□□ 2.53
SH3GL1-201ENST00000269886 PREX1Q8TCU6 1659 aa30.86■■■□□ 2.53
SH3GL1-201ENST00000269886 AAMPQ13685 434 aa30.84■■■□□ 2.53
SH3GL1-201ENST00000269886 TERF2IPQ9NYB0 399 aa30.84■■■□□ 2.53
SH3GL1-201ENST00000269886 YTHDC2Q9H6S0 1430 aaKnown RBP30.84■■■□□ 2.53
SH3GL1-201ENST00000269886 ATAD2Q6PL18 1390 aa30.84■■■□□ 2.53
SH3GL1-201ENST00000269886 FAM69CQ0P6D2 419 aa30.84■■■□□ 2.53
SH3GL1-201ENST00000269886 TMPOP42166 694 aaKnown RBP30.83■■■□□ 2.53
SH3GL1-201ENST00000269886 VIRMAQ69YN4 1812 aaKnown RBP30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms