RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 RRP1P56182 461 aaKnown RBP14.5□□□□□ -0.09
SRRM4-201ENST00000267260 IQCEQ6IPM2 695 aa14.5□□□□□ -0.09
SRRM4-201ENST00000267260 MAGEC2Q9UBF1 373 aaPredicted RBP14.5□□□□□ -0.09
SRRM4-201ENST00000267260 PSMA5P28066 241 aa14.5□□□□□ -0.09
SRRM4-201ENST00000267260 ERLIN1O75477 346 aa14.49□□□□□ -0.09
SRRM4-201ENST00000267260 HSP90AB4PQ58FF6 505 aa14.49□□□□□ -0.09
SRRM4-201ENST00000267260 TXLNAP40222 546 aa14.49□□□□□ -0.09
SRRM4-201ENST00000267260 MLECQ14165 292 aa14.49□□□□□ -0.09
SRRM4-201ENST00000267260 SLC4A3P48751 1232 aa14.48□□□□□ -0.09
SRRM4-201ENST00000267260 SKIDA1Q1XH10 827 aa14.48□□□□□ -0.09
SRRM4-201ENST00000267260 RALYLQ86SE5 291 aaKnown RBP14.48□□□□□ -0.09
SRRM4-201ENST00000267260 RAD21O60216 631 aa14.48□□□□□ -0.09
SRRM4-201ENST00000267260 CWC22Q9HCG8 908 aaKnown RBP14.48□□□□□ -0.09
SRRM4-201ENST00000267260 PDCP20941 246 aa14.48□□□□□ -0.09
SRRM4-201ENST00000267260 VPS37CA5D8V6 355 aaPredicted RBP14.47□□□□□ -0.09
SRRM4-201ENST00000267260 GBP2P32456 591 aaPredicted RBP14.47□□□□□ -0.09
SRRM4-201ENST00000267260 MBD3O95983 291 aa14.47□□□□□ -0.09
SRRM4-201ENST00000267260 FBXW7Q969H0 707 aa14.47□□□□□ -0.09
SRRM4-201ENST00000267260 CARMIL1Q5VZK9 1371 aa14.47□□□□□ -0.09
SRRM4-201ENST00000267260 CUX2O14529 1486 aa14.47□□□□□ -0.09
SRRM4-201ENST00000267260 GGT6Q6P531 493 aa14.47□□□□□ -0.09
SRRM4-201ENST00000267260 TTC5Q8N0Z6 440 aa14.47□□□□□ -0.09
SRRM4-201ENST00000267260 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.47□□□□□ -0.09
SRRM4-201ENST00000267260 KINO60870 393 aaKnown RBP14.47□□□□□ -0.09
SRRM4-201ENST00000267260 MCM2P49736 904 aa14.47□□□□□ -0.09
SRRM4-201ENST00000267260 ZNHIT6Q9NWK9 470 aaKnown RBP14.47□□□□□ -0.09
SRRM4-201ENST00000267260 TRIM5Q9C035 493 aa14.46□□□□□ -0.09
SRRM4-201ENST00000267260 RSPH4AQ5TD94 716 aa14.46□□□□□ -0.09
SRRM4-201ENST00000267260 TTLL5Q6EMB2 1281 aa14.46□□□□□ -0.1
SRRM4-201ENST00000267260 ANKRD62A6NC57 917 aa14.45□□□□□ -0.1
SRRM4-201ENST00000267260 G3BP1Q13283 466 aaKnown RBP eCLIP14.45□□□□□ -0.1
SRRM4-201ENST00000267260 TEFQ10587 303 aa14.45□□□□□ -0.1
SRRM4-201ENST00000267260 SDF4Q9BRK5 362 aa14.45□□□□□ -0.1
SRRM4-201ENST00000267260 BCL11BQ9C0K0 894 aaPredicted RBP14.45□□□□□ -0.1
SRRM4-201ENST00000267260 SART3Q15020 963 aaKnown RBP14.44□□□□□ -0.1
SRRM4-201ENST00000267260 SLC26A8Q96RN1 970 aa14.44□□□□□ -0.1
SRRM4-201ENST00000267260 CCDC144AA2RUR9 1427 aa14.44□□□□□ -0.1
SRRM4-201ENST00000267260 DDX11Q96FC9 970 aa14.44□□□□□ -0.1
SRRM4-201ENST00000267260 EVC2Q86UK5 1308 aa14.43□□□□□ -0.1
SRRM4-201ENST00000267260 SMC2O95347 1197 aa14.43□□□□□ -0.1
SRRM4-201ENST00000267260 COG3Q96JB2 828 aa14.43□□□□□ -0.1
SRRM4-201ENST00000267260 CENPHQ9H3R5 247 aa14.43□□□□□ -0.1
SRRM4-201ENST00000267260 TSPY26PQ9H489 355 aa14.43□□□□□ -0.1
SRRM4-201ENST00000267260 API5Q9BZZ5 524 aaKnown RBP14.43□□□□□ -0.1
SRRM4-201ENST00000267260 LRRCC1Q9C099 1032 aa14.43□□□□□ -0.1
SRRM4-201ENST00000267260 NF2P35240 595 aa14.42□□□□□ -0.1
SRRM4-201ENST00000267260 HIP1O00291 1037 aa14.42□□□□□ -0.1
SRRM4-201ENST00000267260 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.42□□□□□ -0.1
SRRM4-201ENST00000267260 DACH1Q9UI36 760 aa14.42□□□□□ -0.1
SRRM4-201ENST00000267260 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.42□□□□□ -0.1
SRRM4-201ENST00000267260 CDK5RAP3Q96JB5 506 aa14.42□□□□□ -0.1
SRRM4-201ENST00000267260 EVA1CP58658 441 aa14.42□□□□□ -0.1
SRRM4-201ENST00000267260 STIM1Q13586 685 aa14.42□□□□□ -0.1
SRRM4-201ENST00000267260 CCAR1Q8IX12 1150 aaKnown RBP14.42□□□□□ -0.1
SRRM4-201ENST00000267260 RBM10P98175 930 aaKnown RBP14.41□□□□□ -0.1
SRRM4-201ENST00000267260 CRBNQ96SW2 442 aa14.41□□□□□ -0.1
SRRM4-201ENST00000267260 ZNF396Q96N95 335 aaPredicted RBP14.41□□□□□ -0.1
SRRM4-201ENST00000267260 CCDC181Q5TID7 509 aa14.41□□□□□ -0.1
SRRM4-201ENST00000267260 WASHC2AQ641Q2 1341 aa14.41□□□□□ -0.1
SRRM4-201ENST00000267260 SPATA24Q86W54 205 aa14.41□□□□□ -0.1
SRRM4-201ENST00000267260 CNTROBQ8N137 903 aa14.41□□□□□ -0.1
SRRM4-201ENST00000267260 SLC3A2P08195 630 aaKnown RBP14.4□□□□□ -0.1
SRRM4-201ENST00000267260 DESP17661 470 aa14.4□□□□□ -0.1
SRRM4-201ENST00000267260 CCDC112Q8NEF3 446 aa14.4□□□□□ -0.1
SRRM4-201ENST00000267260 C22orf23Q9BZE7 217 aa14.4□□□□□ -0.1
SRRM4-201ENST00000267260 NFKBIBQ15653 356 aa14.4□□□□□ -0.1
SRRM4-201ENST00000267260 RBM33Q96EV2 1170 aaKnown RBP14.4□□□□□ -0.1
SRRM4-201ENST00000267260 SMARCA2P51531 1590 aa14.4□□□□□ -0.1
SRRM4-201ENST00000267260 JMYQ8N9B5 988 aa14.4□□□□□ -0.1
SRRM4-201ENST00000267260 PDCL2Q8N4E4 241 aa14.39□□□□□ -0.11
SRRM4-201ENST00000267260 CCDC91Q7Z6B0 441 aa14.39□□□□□ -0.11
SRRM4-201ENST00000267260 DZIP1LQ8IYY4 767 aaKnown RBP14.39□□□□□ -0.11
SRRM4-201ENST00000267260 UQCRHLA0A096LP55 91 aa14.39□□□□□ -0.11
SRRM4-201ENST00000267260 UQCRHP07919 91 aa14.39□□□□□ -0.11
SRRM4-201ENST00000267260 FAM107BQ9H098 131 aa14.39□□□□□ -0.11
SRRM4-201ENST00000267260 TRHP20396 242 aaPredicted RBP14.38□□□□□ -0.11
SRRM4-201ENST00000267260 TAX1BP1Q86VP1 789 aa14.38□□□□□ -0.11
SRRM4-201ENST00000267260 FOXD1Q16676 465 aa14.38□□□□□ -0.11
SRRM4-201ENST00000267260 EFCAB2Q5VUJ9 269 aa14.38□□□□□ -0.11
SRRM4-201ENST00000267260 PAF1Q8N7H5 531 aa14.38□□□□□ -0.11
SRRM4-201ENST00000267260 LTV1Q96GA3 475 aaPredicted RBP14.38□□□□□ -0.11
SRRM4-201ENST00000267260 SHTN1A0MZ66 631 aa14.37□□□□□ -0.11
SRRM4-201ENST00000267260 PPM1EQ8WY54 764 aa14.37□□□□□ -0.11
SRRM4-201ENST00000267260 ERICH4A6NGS2 130 aa14.36□□□□□ -0.11
SRRM4-201ENST00000267260 TRAK2O60296 914 aa14.36□□□□□ -0.11
SRRM4-201ENST00000267260 GOLGA6L10A0A0M3HER8 536 aa14.36□□□□□ -0.11
SRRM4-201ENST00000267260 PPFIBP1Q86W92 1011 aa14.36□□□□□ -0.11
SRRM4-201ENST00000267260 MIA2Q96PC5 1412 aa14.36□□□□□ -0.11
SRRM4-201ENST00000267260 CEP63Q96MT8 703 aa14.36□□□□□ -0.11
SRRM4-201ENST00000267260 CBFA2T2O43439 604 aa14.36□□□□□ -0.11
SRRM4-201ENST00000267260 CCDC192P0DO97 292 aa14.35□□□□□ -0.11
SRRM4-201ENST00000267260 TMEM132AQ24JP5 1023 aa14.35□□□□□ -0.11
SRRM4-201ENST00000267260 CALCOCO1Q9P1Z2 691 aa14.35□□□□□ -0.11
SRRM4-201ENST00000267260 STAMBPO95630 424 aa14.35□□□□□ -0.11
SRRM4-201ENST00000267260 TRIM21P19474 475 aaKnown RBP14.35□□□□□ -0.11
SRRM4-201ENST00000267260 RNF214Q8ND24 703 aa14.34□□□□□ -0.11
SRRM4-201ENST00000267260 CDC45O75419 566 aa14.34□□□□□ -0.11
SRRM4-201ENST00000267260 PDIA4P13667 645 aaKnown RBP14.34□□□□□ -0.11
SRRM4-201ENST00000267260 ANKRD1Q15327 319 aa14.34□□□□□ -0.11
SRRM4-201ENST00000267260 RRP7AQ9Y3A4 280 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms