RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 NUTM2FA1L443 756 aa17.02■□□□□ 0.32
PRPF6-201ENST00000266079 SETBP1Q9Y6X0 1596 aa17.01■□□□□ 0.31
PRPF6-201ENST00000266079 CABP2Q9NPB3 220 aa17.01■□□□□ 0.31
PRPF6-201ENST00000266079 LAMC1P11047 1609 aa17■□□□□ 0.31
PRPF6-201ENST00000266079 TBX22Q9Y458 520 aa17■□□□□ 0.31
PRPF6-201ENST00000266079 KCNA6P17658 529 aa17■□□□□ 0.31
PRPF6-201ENST00000266079 TMC1Q8TDI8 760 aa17■□□□□ 0.31
PRPF6-201ENST00000266079 ZNF142P52746 1687 aaPredicted RBP16.99■□□□□ 0.31
PRPF6-201ENST00000266079 SRPK2P78362 688 aaKnown RBP16.99■□□□□ 0.31
PRPF6-201ENST00000266079 LRPPRCP42704 1394 aaKnown RBP16.99■□□□□ 0.31
PRPF6-201ENST00000266079 ROBO2Q9HCK4 1378 aa16.99■□□□□ 0.31
PRPF6-201ENST00000266079 PTPRUQ92729 1446 aa16.99■□□□□ 0.31
PRPF6-201ENST00000266079 NPHP4O75161 1426 aaPredicted RBP16.98■□□□□ 0.31
PRPF6-201ENST00000266079 NOP58Q9Y2X3 529 aaKnown RBP16.96■□□□□ 0.31
PRPF6-201ENST00000266079 LMTK3Q96Q04 1460 aa16.96■□□□□ 0.31
PRPF6-201ENST00000266079 ABCC11Q96J66 1382 aa16.96■□□□□ 0.31
PRPF6-201ENST00000266079 SETD1AO15047 1707 aaKnown RBP16.95■□□□□ 0.3
PRPF6-201ENST00000266079 ARHGEF28Q8N1W1 1705 aaKnown RBP16.94■□□□□ 0.3
PRPF6-201ENST00000266079 PANK3Q9H999 370 aa16.94■□□□□ 0.3
PRPF6-201ENST00000266079 SLC12A5Q9H2X9 1139 aa16.94■□□□□ 0.3
PRPF6-201ENST00000266079 MED14O60244 1454 aa16.93■□□□□ 0.3
PRPF6-201ENST00000266079 EVC2Q86UK5 1308 aa16.93■□□□□ 0.3
PRPF6-201ENST00000266079 CDK19Q9BWU1 502 aa16.93■□□□□ 0.3
PRPF6-201ENST00000266079 QRICH2Q9H0J4 1663 aa16.93■□□□□ 0.3
PRPF6-201ENST00000266079 C14orf37Q86TY3 774 aa16.93■□□□□ 0.3
PRPF6-201ENST00000266079 CDCA8Q53HL2 280 aa16.92■□□□□ 0.3
PRPF6-201ENST00000266079 B4GALNT3Q6L9W6 998 aa16.91■□□□□ 0.3
PRPF6-201ENST00000266079 NBR1Q14596 966 aa16.89■□□□□ 0.29
PRPF6-201ENST00000266079 PAK3O75914 559 aaPredicted RBP16.88■□□□□ 0.29
PRPF6-201ENST00000266079 CC2D1BQ5T0F9 858 aaKnown RBP16.88■□□□□ 0.29
PRPF6-201ENST00000266079 TULP4Q9NRJ4 1543 aa16.88■□□□□ 0.29
PRPF6-201ENST00000266079 SBNO2Q9Y2G9 1366 aa16.87■□□□□ 0.29
PRPF6-201ENST00000266079 PROSER2Q86WR7 435 aaPredicted RBP16.87■□□□□ 0.29
PRPF6-201ENST00000266079 WASLO00401 505 aaPredicted RBP16.86■□□□□ 0.29
PRPF6-201ENST00000266079 POLR1AO95602 1720 aaPredicted RBP16.86■□□□□ 0.29
PRPF6-201ENST00000266079 CABP1Q9NZU7 370 aa16.86■□□□□ 0.29
PRPF6-201ENST00000266079 SLC24A1O60721 1099 aa16.85■□□□□ 0.29
PRPF6-201ENST00000266079 ANO8Q9HCE9 1232 aaPredicted RBP16.85■□□□□ 0.29
PRPF6-201ENST00000266079 TECPR2O15040 1411 aa16.85■□□□□ 0.29
PRPF6-201ENST00000266079 ZNF335Q9H4Z2 1342 aaPredicted RBP16.84■□□□□ 0.29
PRPF6-201ENST00000266079 FAM135BQ49AJ0 1406 aa16.83■□□□□ 0.28
PRPF6-201ENST00000266079 DLC1Q96QB1 1528 aa16.83■□□□□ 0.28
PRPF6-201ENST00000266079 AEBP2Q6ZN18 517 aaPredicted RBP16.83■□□□□ 0.28
PRPF6-201ENST00000266079 NUDT16Q96DE0 195 aaKnown RBP16.83■□□□□ 0.28
PRPF6-201ENST00000266079 KNSTRNQ9Y448 316 aa16.82■□□□□ 0.28
PRPF6-201ENST00000266079 DIP2AQ14689 1571 aa16.82■□□□□ 0.28
PRPF6-201ENST00000266079 CARD14Q9BXL6 1004 aa16.82■□□□□ 0.28
PRPF6-201ENST00000266079 CPS1P31327 1500 aa16.82■□□□□ 0.28
PRPF6-201ENST00000266079 PMFBP1Q8TBY8 1022 aa16.81■□□□□ 0.28
PRPF6-201ENST00000266079 PIK3R4Q99570 1358 aa16.81■□□□□ 0.28
PRPF6-201ENST00000266079 SIRT1Q96EB6 747 aa16.81■□□□□ 0.28
PRPF6-201ENST00000266079 ZBED9Q6R2W3 1325 aa16.81■□□□□ 0.28
PRPF6-201ENST00000266079 PRR36Q9H6K5 1346 aa16.81■□□□□ 0.28
PRPF6-201ENST00000266079 PER1O15534 1290 aaPredicted RBP16.8■□□□□ 0.28
PRPF6-201ENST00000266079 CCDC184Q52MB2 194 aa16.8■□□□□ 0.28
PRPF6-201ENST00000266079 PRKRIP1Q9H875 184 aaPredicted RBP16.8■□□□□ 0.28
PRPF6-201ENST00000266079 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.8■□□□□ 0.28
PRPF6-201ENST00000266079 PTCH1Q13635 1447 aa16.79■□□□□ 0.28
PRPF6-201ENST00000266079 STRCQ7RTU9 1775 aa16.79■□□□□ 0.28
PRPF6-201ENST00000266079 RTL5Q5HYW3 569 aaPredicted RBP16.79■□□□□ 0.28
PRPF6-201ENST00000266079 TNNT2P45379 298 aaPredicted RBP16.78■□□□□ 0.28
PRPF6-201ENST00000266079 IPO9Q96P70 1041 aaKnown RBP16.78■□□□□ 0.28
PRPF6-201ENST00000266079 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.78■□□□□ 0.28
PRPF6-201ENST00000266079 KNDC1Q76NI1 1749 aa16.77■□□□□ 0.28
PRPF6-201ENST00000266079 XRN1Q8IZH2 1706 aaKnown RBP16.77■□□□□ 0.28
PRPF6-201ENST00000266079 CHD2O14647 1828 aaKnown RBP16.77■□□□□ 0.28
PRPF6-201ENST00000266079 ANP32AP39687 249 aaKnown RBP16.77■□□□□ 0.27
PRPF6-201ENST00000266079 ATAD2Q6PL18 1390 aa16.77■□□□□ 0.27
PRPF6-201ENST00000266079 CCDC61Q9Y6R9 512 aa16.77■□□□□ 0.27
PRPF6-201ENST00000266079 TMEM94Q12767 1356 aa16.76■□□□□ 0.27
PRPF6-201ENST00000266079 FAM9BQ8IZU0 186 aa16.76■□□□□ 0.27
PRPF6-201ENST00000266079 PPIP5K1Q6PFW1 1433 aa16.75■□□□□ 0.27
PRPF6-201ENST00000266079 NSD3Q9BZ95 1437 aa16.75■□□□□ 0.27
PRPF6-201ENST00000266079 A0A1W2PP64 1363 aa16.75■□□□□ 0.27
PRPF6-201ENST00000266079 MYOM1P52179 1685 aa16.75■□□□□ 0.27
PRPF6-201ENST00000266079 PLEKHG5O94827 1062 aa16.75■□□□□ 0.27
PRPF6-201ENST00000266079 TERF2IPQ9NYB0 399 aa16.74■□□□□ 0.27
PRPF6-201ENST00000266079 ZBTB47Q9UFB7 747 aaPredicted RBP16.74■□□□□ 0.27
PRPF6-201ENST00000266079 SALL2Q9Y467 1007 aaPredicted RBP16.74■□□□□ 0.27
PRPF6-201ENST00000266079 HDGFL2Q7Z4V5 671 aaPredicted RBP16.73■□□□□ 0.27
PRPF6-201ENST00000266079 AMER1Q5JTC6 1135 aaPredicted RBP16.73■□□□□ 0.27
PRPF6-201ENST00000266079 ESCO1Q5FWF5 840 aa16.72■□□□□ 0.27
PRPF6-201ENST00000266079 GGNBP2Q9H3C7 697 aa16.72■□□□□ 0.27
PRPF6-201ENST00000266079 MRS2Q9HD23 443 aa16.72■□□□□ 0.27
PRPF6-201ENST00000266079 NGDNQ8NEJ9 315 aaKnown RBP16.72■□□□□ 0.27
PRPF6-201ENST00000266079 KTN1Q86UP2 1357 aaKnown RBP16.72■□□□□ 0.27
PRPF6-201ENST00000266079 XPCQ01831 940 aaPredicted RBP16.71■□□□□ 0.27
PRPF6-201ENST00000266079 SENP3-EIF4A1A0A087X0R7 540 aa16.71■□□□□ 0.27
PRPF6-201ENST00000266079 ORAI2Q96SN7 254 aa16.71■□□□□ 0.27
PRPF6-201ENST00000266079 ACEP12821 1306 aa16.71■□□□□ 0.26
PRPF6-201ENST00000266079 ATP7BP35670 1465 aa16.7■□□□□ 0.26
PRPF6-201ENST00000266079 ANKRD36BQ8N2N9 1353 aa16.7■□□□□ 0.26
PRPF6-201ENST00000266079 STRCP1A6NGW2 1772 aa16.7■□□□□ 0.26
PRPF6-201ENST00000266079 PUS7Q96PZ0 661 aaKnown RBP16.7■□□□□ 0.26
PRPF6-201ENST00000266079 DMRT2Q9Y5R5 561 aa16.7■□□□□ 0.26
PRPF6-201ENST00000266079 ATF3P18847 181 aa16.69■□□□□ 0.26
PRPF6-201ENST00000266079 C19orf44Q9H6X5 657 aa16.69■□□□□ 0.26
PRPF6-201ENST00000266079 ZRANB1Q9UGI0 708 aa16.69■□□□□ 0.26
PRPF6-201ENST00000266079 ADGRL3Q9HAR2 1447 aa16.69■□□□□ 0.26
PRPF6-201ENST00000266079 FBLN1P23142 703 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms