RNA–Protein interactions for RNA: ENST00000265807.7

SH2D4A-201, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SH2D4A, Length 3,352 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-201ENST00000265807 NPC1L1Q9UHC9 1359 aa15.22■□□□□ 0.03
SH2D4A-201ENST00000265807 EVC2Q86UK5 1308 aa15.21■□□□□ 0.03
SH2D4A-201ENST00000265807 TNNT2P45379 298 aaPredicted RBP15.21■□□□□ 0.03
SH2D4A-201ENST00000265807 BLMP54132 1417 aaPredicted RBP15.21■□□□□ 0.03
SH2D4A-201ENST00000265807 TMEM2Q9UHN6 1383 aa15.21■□□□□ 0.03
SH2D4A-201ENST00000265807 CDCA7LQ96GN5 454 aa15.2■□□□□ 0.02
SH2D4A-201ENST00000265807 A0A1W2PP64 1363 aa15.2■□□□□ 0.02
SH2D4A-201ENST00000265807 NCKAP5LQ9HCH0 1330 aa15.2■□□□□ 0.02
SH2D4A-201ENST00000265807 TXNDC2Q86VQ3 553 aa15.19■□□□□ 0.02
SH2D4A-201ENST00000265807 ADAMTS13Q76LX8 1427 aa15.19■□□□□ 0.02
SH2D4A-201ENST00000265807 POGKQ9P215 609 aa15.19■□□□□ 0.02
SH2D4A-201ENST00000265807 SRPK2P78362 688 aaKnown RBP15.19■□□□□ 0.02
SH2D4A-201ENST00000265807 SMG6Q86US8 1419 aaKnown RBP15.18■□□□□ 0.02
SH2D4A-201ENST00000265807 CDK19Q9BWU1 502 aa15.18■□□□□ 0.02
SH2D4A-201ENST00000265807 SHPRHQ149N8 1683 aa15.17■□□□□ 0.02
SH2D4A-201ENST00000265807 USP32Q8NFA0 1604 aa15.17■□□□□ 0.02
SH2D4A-201ENST00000265807 ANKRD36BQ8N2N9 1353 aa15.16■□□□□ 0.02
SH2D4A-201ENST00000265807 DNAJC5Q9H3Z4 198 aa15.16■□□□□ 0.02
SH2D4A-201ENST00000265807 SLC24A1O60721 1099 aa15.16■□□□□ 0.02
SH2D4A-201ENST00000265807 DLC1Q96QB1 1528 aa15.16■□□□□ 0.02
SH2D4A-201ENST00000265807 ABCC11Q96J66 1382 aa15.15■□□□□ 0.02
SH2D4A-201ENST00000265807 NUDCQ9Y266 331 aa15.15■□□□□ 0.02
SH2D4A-201ENST00000265807 PTPRUQ92729 1446 aa15.15■□□□□ 0.02
SH2D4A-201ENST00000265807 CCDC146Q8IYE0 955 aa15.15■□□□□ 0.02
SH2D4A-201ENST00000265807 SLC26A8Q96RN1 970 aa15.15■□□□□ 0.02
SH2D4A-201ENST00000265807 CABP1Q9NZU7 370 aa15.15■□□□□ 0.02
SH2D4A-201ENST00000265807 ROBO2Q9HCK4 1378 aa15.14■□□□□ 0.01
SH2D4A-201ENST00000265807 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.14■□□□□ 0.01
SH2D4A-201ENST00000265807 NLRP1Q9C000 1473 aa15.14■□□□□ 0.01
SH2D4A-201ENST00000265807 RIMS1Q86UR5 1692 aaKnown RBP15.13■□□□□ 0.01
SH2D4A-201ENST00000265807 FBLN1P23142 703 aa15.13■□□□□ 0.01
SH2D4A-201ENST00000265807 PUS7Q96PZ0 661 aaKnown RBP15.13■□□□□ 0.01
SH2D4A-201ENST00000265807 KNDC1Q76NI1 1749 aa15.13■□□□□ 0.01
SH2D4A-201ENST00000265807 GGNBP2Q9H3C7 697 aa15.12■□□□□ 0.01
SH2D4A-201ENST00000265807 MED14O60244 1454 aa15.12■□□□□ 0.01
SH2D4A-201ENST00000265807 MORC1Q86VD1 984 aa15.11■□□□□ 0.01
SH2D4A-201ENST00000265807 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.11■□□□□ 0.01
SH2D4A-201ENST00000265807 CPS1P31327 1500 aa15.1■□□□□ 0.01
SH2D4A-201ENST00000265807 FYB1O15117 783 aa15.1■□□□□ 0.01
SH2D4A-201ENST00000265807 ARHGAP23Q9P227 1491 aa15.1■□□□□ 0.01
SH2D4A-201ENST00000265807 DMRT2Q9Y5R5 561 aa15.1■□□□□ 0.01
SH2D4A-201ENST00000265807 SLIT1O75093 1534 aa15.1■□□□□ 0.01
SH2D4A-201ENST00000265807 TECPR2O15040 1411 aa15.1■□□□□ 0.01
SH2D4A-201ENST00000265807 MTHFSP49914 203 aa15.09■□□□□ 0.01
SH2D4A-201ENST00000265807 CGNL1Q0VF96 1302 aa15.09■□□□□ 0.01
SH2D4A-201ENST00000265807 PRR36Q9H6K5 1346 aa15.09■□□□□ 0.01
SH2D4A-201ENST00000265807 SPINK5Q9NQ38 1064 aaPredicted RBP15.09■□□□□ 0.01
SH2D4A-201ENST00000265807 PLEKHG1Q9ULL1 1385 aa15.09■□□□□ 0.01
SH2D4A-201ENST00000265807 RNF123Q5XPI4 1314 aa15.09■□□□□ 0.01
SH2D4A-201ENST00000265807 NEFLP07196 543 aa15.08■□□□□ 0.01
SH2D4A-201ENST00000265807 ZNF521Q96K83 1311 aa15.08■□□□□ 0
SH2D4A-201ENST00000265807 ATAD2Q6PL18 1390 aa15.07■□□□□ 0
SH2D4A-201ENST00000265807 WASLO00401 505 aaPredicted RBP15.07■□□□□ 0
SH2D4A-201ENST00000265807 ZRANB1Q9UGI0 708 aa15.07■□□□□ 0
SH2D4A-201ENST00000265807 POLR3AO14802 1390 aaPredicted RBP15.07■□□□□ 0
SH2D4A-201ENST00000265807 INSRP06213 1382 aa15.07■□□□□ 0
SH2D4A-201ENST00000265807 ANKRD26Q9UPS8 1709 aa15.07■□□□□ 0
SH2D4A-201ENST00000265807 WDR43Q15061 677 aaKnown RBP eCLIP15.07■□□□□ 0
SH2D4A-201ENST00000265807 ADAMTSL3P82987 1691 aa15.06■□□□□ 0
SH2D4A-201ENST00000265807 KIF20BQ96Q89 1820 aa15.06■□□□□ 0
SH2D4A-201ENST00000265807 NUTM2FA1L443 756 aa15.06■□□□□ 0
SH2D4A-201ENST00000265807 APAF1O14727 1248 aa15.06■□□□□ 0
SH2D4A-201ENST00000265807 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.05■□□□□ -0
SH2D4A-201ENST00000265807 FAM135BQ49AJ0 1406 aa15.05■□□□□ -0
SH2D4A-201ENST00000265807 RGPD8O14715 1765 aaPredicted RBP15.04■□□□□ -0
SH2D4A-201ENST00000265807 CEP170BQ9Y4F5 1589 aaPredicted RBP15.04■□□□□ -0
SH2D4A-201ENST00000265807 PPIP5K1Q6PFW1 1433 aa15.04■□□□□ -0
SH2D4A-201ENST00000265807 ATP7BP35670 1465 aa15.04■□□□□ -0
SH2D4A-201ENST00000265807 NUDT16Q96DE0 195 aaKnown RBP15.03■□□□□ -0
SH2D4A-201ENST00000265807 CPSF1Q10570 1443 aaKnown RBP15.03■□□□□ -0
SH2D4A-201ENST00000265807 NINLQ9Y2I6 1382 aa15.02■□□□□ -0
SH2D4A-201ENST00000265807 COL3A1P02461 1466 aaPredicted RBP15.02■□□□□ -0
SH2D4A-201ENST00000265807 AMOTL2Q9Y2J4 779 aa15.02□□□□□ -0.01
SH2D4A-201ENST00000265807 NKTRP30414 1462 aaKnown RBP15.01□□□□□ -0.01
SH2D4A-201ENST00000265807 MAP2P11137 1827 aaKnown RBP15.01□□□□□ -0.01
SH2D4A-201ENST00000265807 HDGFP51858 240 aaKnown RBP15.01□□□□□ -0.01
SH2D4A-201ENST00000265807 TERF2IPQ9NYB0 399 aa15.01□□□□□ -0.01
SH2D4A-201ENST00000265807 AKAP12Q02952 1782 aa15.01□□□□□ -0.01
SH2D4A-201ENST00000265807 MON2Q7Z3U7 1717 aa15.01□□□□□ -0.01
SH2D4A-201ENST00000265807 NME9Q86XW9 330 aa15.01□□□□□ -0.01
SH2D4A-201ENST00000265807 RRP7AQ9Y3A4 280 aaKnown RBP15.01□□□□□ -0.01
SH2D4A-201ENST00000265807 DUSP27Q5VZP5 1158 aa15□□□□□ -0.01
SH2D4A-201ENST00000265807 B4GALNT3Q6L9W6 998 aa15□□□□□ -0.01
SH2D4A-201ENST00000265807 SIRT1Q96EB6 747 aa15□□□□□ -0.01
SH2D4A-201ENST00000265807 RBM33Q96EV2 1170 aaKnown RBP15□□□□□ -0.01
SH2D4A-201ENST00000265807 PLIN1O60240 522 aa14.99□□□□□ -0.01
SH2D4A-201ENST00000265807 NSD2O96028 1365 aa14.99□□□□□ -0.01
SH2D4A-201ENST00000265807 CDC42BPGQ6DT37 1551 aa14.99□□□□□ -0.01
SH2D4A-201ENST00000265807 TOPAZ1Q8N9V7 1692 aa14.99□□□□□ -0.01
SH2D4A-201ENST00000265807 THEMISQ8N1K5 641 aaPredicted RBP14.99□□□□□ -0.01
SH2D4A-201ENST00000265807 EID1Q9Y6B2 187 aa14.99□□□□□ -0.01
SH2D4A-201ENST00000265807 ADGRB2O60241 1585 aa14.99□□□□□ -0.01
SH2D4A-201ENST00000265807 XRN1Q8IZH2 1706 aaKnown RBP14.98□□□□□ -0.01
SH2D4A-201ENST00000265807 RCAN3Q9UKA8 241 aa14.98□□□□□ -0.01
SH2D4A-201ENST00000265807 IQSEC2Q5JU85 1478 aa14.98□□□□□ -0.01
SH2D4A-201ENST00000265807 TSHZ2Q9NRE2 1034 aa14.98□□□□□ -0.01
SH2D4A-201ENST00000265807 HDGFL2Q7Z4V5 671 aaPredicted RBP14.98□□□□□ -0.01
SH2D4A-201ENST00000265807 PDE3BQ13370 1112 aa14.97□□□□□ -0.01
SH2D4A-201ENST00000265807 KCNA6P17658 529 aa14.97□□□□□ -0.01
SH2D4A-201ENST00000265807 TBX22Q9Y458 520 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms