RNA–Protein interactions for RNA: ENST00000265562.4

PTPN23-201, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN23, Length 5,244 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-201ENST00000265562 PCMTD1Q96MG8 357 aaPredicted RBP16.89■□□□□ 0.29
PTPN23-201ENST00000265562 TRIM5Q9C035 493 aa16.89■□□□□ 0.29
PTPN23-201ENST00000265562 RUFY1Q96T51 708 aa16.88■□□□□ 0.29
PTPN23-201ENST00000265562 MCM2P49736 904 aa16.87■□□□□ 0.29
PTPN23-201ENST00000265562 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.87■□□□□ 0.292e-6■■□□□ 12.5
PTPN23-201ENST00000265562 FKBP5Q13451 457 aaPredicted RBP16.86■□□□□ 0.29
PTPN23-201ENST00000265562 HSP90AB4PQ58FF6 505 aa16.86■□□□□ 0.29
PTPN23-201ENST00000265562 ERC2O15083 957 aa16.86■□□□□ 0.29
PTPN23-201ENST00000265562 VGFO15240 615 aaPredicted RBP16.86■□□□□ 0.29
PTPN23-201ENST00000265562 NEXNQ0ZGT2 675 aa16.86■□□□□ 0.29
PTPN23-201ENST00000265562 MCM4P33991 863 aa16.85■□□□□ 0.29
PTPN23-201ENST00000265562 NEK4P51957 841 aa16.85■□□□□ 0.29
PTPN23-201ENST00000265562 CCDC47Q96A33 483 aaKnown RBP16.85■□□□□ 0.29
PTPN23-201ENST00000265562 UQCRHLA0A096LP55 91 aa16.85■□□□□ 0.29
PTPN23-201ENST00000265562 UQCRHP07919 91 aa16.85■□□□□ 0.29
PTPN23-201ENST00000265562 EIF2S2P20042 333 aaKnown RBP16.84■□□□□ 0.29
PTPN23-201ENST00000265562 KIF21BO75037 1637 aa16.84■□□□□ 0.29
PTPN23-201ENST00000265562 MYOM3Q5VTT5 1437 aa16.84■□□□□ 0.29
PTPN23-201ENST00000265562 CWC22Q9HCG8 908 aaKnown RBP16.84■□□□□ 0.29
PTPN23-201ENST00000265562 TEFQ10587 303 aa16.84■□□□□ 0.29
PTPN23-201ENST00000265562 G3BP1Q13283 466 aaKnown RBP eCLIP16.84■□□□□ 0.292e-6■■■□□ 14.6
PTPN23-201ENST00000265562 SDF4Q9BRK5 362 aa16.83■□□□□ 0.29
PTPN23-201ENST00000265562 CDR1P51861 262 aa16.83■□□□□ 0.29
PTPN23-201ENST00000265562 NUTM2FA1L443 756 aa16.83■□□□□ 0.28
PTPN23-201ENST00000265562 CCDC27Q2M243 656 aa16.83■□□□□ 0.28
PTPN23-201ENST00000265562 PNISRQ8TF01 805 aaKnown RBP16.83■□□□□ 0.28
PTPN23-201ENST00000265562 ERCC4Q92889 916 aaPredicted RBP16.83■□□□□ 0.28
PTPN23-201ENST00000265562 TRDNQ13061 729 aa16.82■□□□□ 0.28
PTPN23-201ENST00000265562 TCP11L2Q8N4U5 519 aa16.82■□□□□ 0.28
PTPN23-201ENST00000265562 NECTIN2Q92692 538 aa16.82■□□□□ 0.28
PTPN23-201ENST00000265562 MINK1Q8N4C8 1332 aaPredicted RBP16.82■□□□□ 0.28
PTPN23-201ENST00000265562 K7ELQ4 463 aaPredicted RBP16.82■□□□□ 0.28
PTPN23-201ENST00000265562 FOSBP53539 338 aa16.82■□□□□ 0.28
PTPN23-201ENST00000265562 OLFM4Q6UX06 510 aa16.82■□□□□ 0.28
PTPN23-201ENST00000265562 PPP2R1AP30153 589 aa16.81■□□□□ 0.28
PTPN23-201ENST00000265562 GCC1Q96CN9 775 aa16.81■□□□□ 0.28
PTPN23-201ENST00000265562 C1orf141Q5JVX7 400 aa16.81■□□□□ 0.28
PTPN23-201ENST00000265562 CIZ1Q9ULV3 898 aaPredicted RBP16.81■□□□□ 0.28
PTPN23-201ENST00000265562 LRRC9Q6ZRR7 1453 aa16.81■□□□□ 0.28
PTPN23-201ENST00000265562 CCP110O43303 1012 aa16.81■□□□□ 0.28
PTPN23-201ENST00000265562 PSMA5P28066 241 aa16.81■□□□□ 0.28
PTPN23-201ENST00000265562 PDILTQ8N807 584 aa16.81■□□□□ 0.28
PTPN23-201ENST00000265562 CUX1P39880 1505 aa16.8■□□□□ 0.28
PTPN23-201ENST00000265562 VPS53Q5VIR6 699 aa16.8■□□□□ 0.28
PTPN23-201ENST00000265562 IGF1RP08069 1367 aa16.8■□□□□ 0.28
PTPN23-201ENST00000265562 BCAR3O75815 825 aa16.8■□□□□ 0.28
PTPN23-201ENST00000265562 SPC24Q8NBT2 197 aa16.8■□□□□ 0.28
PTPN23-201ENST00000265562 NINLQ9Y2I6 1382 aa16.8■□□□□ 0.28
PTPN23-201ENST00000265562 STAC3Q96MF2 364 aa16.8■□□□□ 0.28
PTPN23-201ENST00000265562 H0YHG0 523 aa16.79■□□□□ 0.28
PTPN23-201ENST00000265562 FIBPO43427 364 aa16.79■□□□□ 0.28
PTPN23-201ENST00000265562 APPP05067 770 aa16.79■□□□□ 0.28
PTPN23-201ENST00000265562 PDCP20941 246 aa16.79■□□□□ 0.28
PTPN23-201ENST00000265562 CCDC112Q8NEF3 446 aa16.78■□□□□ 0.28
PTPN23-201ENST00000265562 RRBP1Q9P2E9 1410 aaKnown RBP16.78■□□□□ 0.28
PTPN23-201ENST00000265562 ZSCAN30Q86W11 494 aa16.78■□□□□ 0.28
PTPN23-201ENST00000265562 PTPRGP23470 1445 aa16.78■□□□□ 0.28
PTPN23-201ENST00000265562 KINO60870 393 aaKnown RBP16.78■□□□□ 0.28
PTPN23-201ENST00000265562 LEKR1Q6ZMV7 388 aa16.78■□□□□ 0.28
PTPN23-201ENST00000265562 SAFBQ15424 915 aaKnown RBP eCLIP16.78■□□□□ 0.28
PTPN23-201ENST00000265562 SMC2O95347 1197 aa16.77■□□□□ 0.28
PTPN23-201ENST00000265562 CNTROBQ8N137 903 aa16.77■□□□□ 0.28
PTPN23-201ENST00000265562 DDX58O95786 925 aaKnown RBP16.77■□□□□ 0.28
PTPN23-201ENST00000265562 NFXL1Q6ZNB6 911 aa16.77■□□□□ 0.28
PTPN23-201ENST00000265562 CCDC192P0DO97 292 aa16.77■□□□□ 0.27
PTPN23-201ENST00000265562 TSPYL4Q9UJ04 414 aa16.77■□□□□ 0.27
PTPN23-201ENST00000265562 EID1Q9Y6B2 187 aa16.77■□□□□ 0.27
PTPN23-201ENST00000265562 CALRP27797 417 aaKnown RBP16.77■□□□□ 0.27
PTPN23-201ENST00000265562 PODXL2Q9NZ53 605 aa16.77■□□□□ 0.27
PTPN23-201ENST00000265562 EXOSC9Q06265 439 aaKnown RBP16.76■□□□□ 0.27
PTPN23-201ENST00000265562 HMOX1P09601 288 aa16.76■□□□□ 0.27
PTPN23-201ENST00000265562 FGD5Q6ZNL6 1462 aa16.76■□□□□ 0.27
PTPN23-201ENST00000265562 CCDC184Q52MB2 194 aa16.75■□□□□ 0.27
PTPN23-201ENST00000265562 UBTFL1P0CB47 393 aaPredicted RBP16.75■□□□□ 0.27
PTPN23-201ENST00000265562 MTHFSP49914 203 aa16.75■□□□□ 0.27
PTPN23-201ENST00000265562 NAP1L1P55209 391 aaKnown RBP16.75■□□□□ 0.27
PTPN23-201ENST00000265562 RDXP35241 583 aaKnown RBP16.74■□□□□ 0.27
PTPN23-201ENST00000265562 MPNDQ8N594 471 aa16.74■□□□□ 0.27
PTPN23-201ENST00000265562 CAGE1Q8TC20 777 aa16.74■□□□□ 0.27
PTPN23-201ENST00000265562 WDR33Q9C0J8 1336 aaKnown RBP16.74■□□□□ 0.27
PTPN23-201ENST00000265562 GAPVD1Q14C86 1478 aa16.74■□□□□ 0.27
PTPN23-201ENST00000265562 TMX4Q9H1E5 349 aaPredicted RBP16.73■□□□□ 0.27
PTPN23-201ENST00000265562 DHX8Q14562 1220 aaKnown RBP16.73■□□□□ 0.27
PTPN23-201ENST00000265562 RRP12Q5JTH9 1297 aaKnown RBP16.73■□□□□ 0.27
PTPN23-201ENST00000265562 RALYLQ86SE5 291 aaKnown RBP16.73■□□□□ 0.27
PTPN23-201ENST00000265562 GNAI3P08754 354 aa16.73■□□□□ 0.27
PTPN23-201ENST00000265562 GGNBP2Q9H3C7 697 aa16.73■□□□□ 0.27
PTPN23-201ENST00000265562 FMNL2Q96PY5 1086 aa16.72■□□□□ 0.27
PTPN23-201ENST00000265562 NOB1Q9ULX3 412 aaKnown RBP16.72■□□□□ 0.27
PTPN23-201ENST00000265562 ERICH2A1L162 156 aa16.72■□□□□ 0.27
PTPN23-201ENST00000265562 C1orf115Q9H7X2 142 aa16.72■□□□□ 0.27
PTPN23-201ENST00000265562 NCAPD3P42695 1498 aa16.72■□□□□ 0.27
PTPN23-201ENST00000265562 GTF2E1P29083 439 aaPredicted RBP16.72■□□□□ 0.27
PTPN23-201ENST00000265562 DCTN1Q14203 1278 aa16.72■□□□□ 0.27
PTPN23-201ENST00000265562 TTC5Q8N0Z6 440 aa16.72■□□□□ 0.27
PTPN23-201ENST00000265562 ZNF644Q9H582 1327 aaPredicted RBP16.71■□□□□ 0.27
PTPN23-201ENST00000265562 TTLL5Q6EMB2 1281 aa16.71■□□□□ 0.27
PTPN23-201ENST00000265562 MVPQ14764 893 aaKnown RBP16.71■□□□□ 0.26
PTPN23-201ENST00000265562 CLASRPQ8N2M8 674 aaKnown RBP16.7■□□□□ 0.26
PTPN23-201ENST00000265562 FSD1Q9BTV5 496 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms