RNA–Protein interactions for RNA: ENST00000264933.8

PDCD6-201, Transcript of programmed cell death 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDCD6, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-201ENST00000264933 GPRASP1Q5JY77 1395 aa19.16■□□□□ 0.66
PDCD6-201ENST00000264933 ROBO2Q9HCK4 1378 aa19.15■□□□□ 0.66
PDCD6-201ENST00000264933 JCADQ9P266 1359 aa19.15■□□□□ 0.66
PDCD6-201ENST00000264933 AHDC1Q5TGY3 1603 aaPredicted RBP19.14■□□□□ 0.66
PDCD6-201ENST00000264933 ARHGEF28Q8N1W1 1705 aaKnown RBP19.14■□□□□ 0.66
PDCD6-201ENST00000264933 POTEAQ6S8J7 498 aa19.14■□□□□ 0.65
PDCD6-201ENST00000264933 C14orf37Q86TY3 774 aa19.14■□□□□ 0.65
PDCD6-201ENST00000264933 CADPS2Q86UW7 1296 aa19.14■□□□□ 0.65
PDCD6-201ENST00000264933 STK26Q9P289 416 aa19.14■□□□□ 0.65
PDCD6-201ENST00000264933 DLC1Q96QB1 1528 aa19.14■□□□□ 0.65
PDCD6-201ENST00000264933 SIRT1Q96EB6 747 aa19.13■□□□□ 0.65
PDCD6-201ENST00000264933 DCCP43146 1447 aa19.13■□□□□ 0.65
PDCD6-201ENST00000264933 PTCH1Q13635 1447 aa19.13■□□□□ 0.65
PDCD6-201ENST00000264933 LRP6O75581 1613 aa19.11■□□□□ 0.65
PDCD6-201ENST00000264933 ATF3P18847 181 aa19.11■□□□□ 0.65
PDCD6-201ENST00000264933 ROCK2O75116 1388 aaKnown RBP19.1■□□□□ 0.65
PDCD6-201ENST00000264933 PLEKHH1Q9ULM0 1364 aa19.1■□□□□ 0.65
PDCD6-201ENST00000264933 BRINP3Q76B58 766 aa19.1■□□□□ 0.65
PDCD6-201ENST00000264933 TRAK1Q9UPV9 953 aa19.1■□□□□ 0.65
PDCD6-201ENST00000264933 MST1RQ04912 1400 aa19.09■□□□□ 0.65
PDCD6-201ENST00000264933 WAPLQ7Z5K2 1190 aa19.09■□□□□ 0.65
PDCD6-201ENST00000264933 NALCNQ8IZF0 1738 aa19.08■□□□□ 0.65
PDCD6-201ENST00000264933 ADGRL3Q9HAR2 1447 aa19.07■□□□□ 0.64
PDCD6-201ENST00000264933 SHPRHQ149N8 1683 aa19.05■□□□□ 0.64
PDCD6-201ENST00000264933 CARD11Q9BXL7 1154 aa19.05■□□□□ 0.64
PDCD6-201ENST00000264933 SPATA31A6Q5VVP1 1343 aa19.04■□□□□ 0.64
PDCD6-201ENST00000264933 PRAM1Q96QH2 718 aa19.04■□□□□ 0.64
PDCD6-201ENST00000264933 NHSL1Q5SYE7 1610 aa19.02■□□□□ 0.64
PDCD6-201ENST00000264933 QRICH2Q9H0J4 1663 aa19.01■□□□□ 0.63
PDCD6-201ENST00000264933 SAFB2Q14151 953 aaKnown RBP eCLIP18.99■□□□□ 0.633e-8■■□□□ 13.6
PDCD6-201ENST00000264933 POGKQ9P215 609 aa18.99■□□□□ 0.63
PDCD6-201ENST00000264933 ADGRB2O60241 1585 aa18.98■□□□□ 0.63
PDCD6-201ENST00000264933 DDX17Q92841 729 aaKnown RBP18.98■□□□□ 0.63
PDCD6-201ENST00000264933 C1orf167Q5SNV9 1468 aa18.97■□□□□ 0.63
PDCD6-201ENST00000264933 CENPJQ9HC77 1338 aaPredicted RBP18.97■□□□□ 0.63
PDCD6-201ENST00000264933 FMN2Q9NZ56 1722 aa18.97■□□□□ 0.63
PDCD6-201ENST00000264933 RGPD8O14715 1765 aaPredicted RBP18.96■□□□□ 0.63
PDCD6-201ENST00000264933 USP47Q96K76 1375 aa18.95■□□□□ 0.62
PDCD6-201ENST00000264933 CDC42BPGQ6DT37 1551 aa18.95■□□□□ 0.62
PDCD6-201ENST00000264933 MINK1Q8N4C8 1332 aaPredicted RBP18.95■□□□□ 0.62
PDCD6-201ENST00000264933 ST20-MTHFSA0A0A6YYL1 179 aa18.94■□□□□ 0.62
PDCD6-201ENST00000264933 TESK2Q96S53 571 aa18.94■□□□□ 0.62
PDCD6-201ENST00000264933 ZEB1P37275 1124 aaPredicted RBP18.93■□□□□ 0.62
PDCD6-201ENST00000264933 HIRIP3Q9BW71 556 aaPredicted RBP18.93■□□□□ 0.62
PDCD6-201ENST00000264933 EIF3AQ14152 1382 aaKnown RBP18.93■□□□□ 0.62
PDCD6-201ENST00000264933 PNPLA6Q8IY17 1366 aa18.93■□□□□ 0.62
PDCD6-201ENST00000264933 USP32Q8NFA0 1604 aa18.92■□□□□ 0.62
PDCD6-201ENST00000264933 TULP4Q9NRJ4 1543 aa18.92■□□□□ 0.62
PDCD6-201ENST00000264933 MEX3CQ5U5Q3 659 aaKnown RBP18.92■□□□□ 0.62
PDCD6-201ENST00000264933 SBNO2Q9Y2G9 1366 aa18.92■□□□□ 0.62
PDCD6-201ENST00000264933 NUTM2BA6NNL0 878 aaPredicted RBP18.91■□□□□ 0.62
PDCD6-201ENST00000264933 NUTM2EB1AL46 878 aaPredicted RBP18.91■□□□□ 0.62
PDCD6-201ENST00000264933 NUTM2AQ8IVF1 878 aaPredicted RBP18.91■□□□□ 0.62
PDCD6-201ENST00000264933 ORAI2Q96SN7 254 aa18.91■□□□□ 0.62
PDCD6-201ENST00000264933 WASLO00401 505 aaPredicted RBP18.9■□□□□ 0.62
PDCD6-201ENST00000264933 ZNF772Q68DY9 489 aaPredicted RBP18.9■□□□□ 0.62
PDCD6-201ENST00000264933 LRRC59Q96AG4 307 aaKnown RBP18.9■□□□□ 0.62
PDCD6-201ENST00000264933 HSPA5P11021 654 aaKnown RBP18.89■□□□□ 0.61
PDCD6-201ENST00000264933 EIF4G2P78344 907 aaKnown RBP eCLIP18.88■□□□□ 0.612e-7■■■■■ 43.7
PDCD6-201ENST00000264933 CDK19Q9BWU1 502 aa18.88■□□□□ 0.61
PDCD6-201ENST00000264933 SOS2Q07890 1332 aaPredicted RBP18.88■□□□□ 0.61
PDCD6-201ENST00000264933 PRR36Q9H6K5 1346 aa18.87■□□□□ 0.61
PDCD6-201ENST00000264933 AFF2P51816 1311 aa18.86■□□□□ 0.61
PDCD6-201ENST00000264933 NUTM2FA1L443 756 aa18.84■□□□□ 0.61
PDCD6-201ENST00000264933 ATP7BP35670 1465 aa18.84■□□□□ 0.61
PDCD6-201ENST00000264933 TOPAZ1Q8N9V7 1692 aa18.83■□□□□ 0.61
PDCD6-201ENST00000264933 CABP2Q9NPB3 220 aa18.83■□□□□ 0.6
PDCD6-201ENST00000264933 EVC2Q86UK5 1308 aa18.82■□□□□ 0.6
PDCD6-201ENST00000264933 CDK12Q9NYV4 1490 aaPredicted RBP18.82■□□□□ 0.6
PDCD6-201ENST00000264933 ANKARQ7Z5J8 1434 aa18.82■□□□□ 0.6
PDCD6-201ENST00000264933 RXRBP28702 533 aa18.81■□□□□ 0.6
PDCD6-201ENST00000264933 NUDT16Q96DE0 195 aaKnown RBP18.81■□□□□ 0.6
PDCD6-201ENST00000264933 PXDNQ92626 1479 aa18.81■□□□□ 0.6
PDCD6-201ENST00000264933 ITSN1Q15811 1721 aa18.8■□□□□ 0.6
PDCD6-201ENST00000264933 C11orf95C9JLR9 678 aaPredicted RBP18.8■□□□□ 0.6
PDCD6-201ENST00000264933 C8orf37Q96NL8 207 aa18.8■□□□□ 0.6
PDCD6-201ENST00000264933 COL22A1Q8NFW1 1626 aaPredicted RBP18.79■□□□□ 0.6
PDCD6-201ENST00000264933 UPF1Q92900 1129 aaKnown RBP eCLIP18.78■□□□□ 0.6
PDCD6-201ENST00000264933 PUS7Q96PZ0 661 aaKnown RBP18.78■□□□□ 0.6
PDCD6-201ENST00000264933 RGS12O14924 1447 aa18.77■□□□□ 0.6
PDCD6-201ENST00000264933 SLC24A1O60721 1099 aa18.77■□□□□ 0.6
PDCD6-201ENST00000264933 ADAMTS2O95450 1211 aa18.77■□□□□ 0.6
PDCD6-201ENST00000264933 SRPK2P78362 688 aaKnown RBP18.77■□□□□ 0.6
PDCD6-201ENST00000264933 ESCO1Q5FWF5 840 aa18.77■□□□□ 0.6
PDCD6-201ENST00000264933 TMF1P82094 1093 aa18.76■□□□□ 0.59
PDCD6-201ENST00000264933 CCDC61Q9Y6R9 512 aa18.76■□□□□ 0.59
PDCD6-201ENST00000264933 KIF1AQ12756 1690 aa18.76■□□□□ 0.59
PDCD6-201ENST00000264933 NPHP3Q7Z494 1330 aa18.75■□□□□ 0.59
PDCD6-201ENST00000264933 PLEKHG3A1L390 1219 aa18.74■□□□□ 0.59
PDCD6-201ENST00000264933 FOXO3O43524 673 aa18.74■□□□□ 0.59
PDCD6-201ENST00000264933 XPCQ01831 940 aaPredicted RBP18.74■□□□□ 0.59
PDCD6-201ENST00000264933 QTRT2Q9H974 415 aaKnown RBP18.74■□□□□ 0.59
PDCD6-201ENST00000264933 PHF8Q9UPP1 1060 aa18.74■□□□□ 0.59
PDCD6-201ENST00000264933 MYOM1P52179 1685 aa18.73■□□□□ 0.59
PDCD6-201ENST00000264933 PMFBP1Q8TBY8 1022 aa18.73■□□□□ 0.59
PDCD6-201ENST00000264933 AKAP12Q02952 1782 aa18.73■□□□□ 0.59
PDCD6-201ENST00000264933 RBM6P78332 1123 aaKnown RBP18.72■□□□□ 0.59
PDCD6-201ENST00000264933 FNBP4Q8N3X1 1017 aaPredicted RBP18.72■□□□□ 0.59
PDCD6-201ENST00000264933 NGLY1Q96IV0 654 aa18.72■□□□□ 0.59
PDCD6-201ENST00000264933 CABP1Q9NZU7 370 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms