RNA–Protein interactions for RNA: ENST00000264718.7

GPN1-201, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-201ENST00000264718 FAM135AQ9P2D6 1515 aa18.38■□□□□ 0.53
GPN1-201ENST00000264718 APAF1O14727 1248 aa18.38■□□□□ 0.53
GPN1-201ENST00000264718 WDR7Q9Y4E6 1490 aa18.37■□□□□ 0.53
GPN1-201ENST00000264718 ARID3CA6NKF2 412 aa18.37■□□□□ 0.53
GPN1-201ENST00000264718 NBPF1Q3BBV0 1214 aa18.37■□□□□ 0.53
GPN1-201ENST00000264718 NOL7Q9UMY1 257 aaKnown RBP18.37■□□□□ 0.53
GPN1-201ENST00000264718 SYNMO15061 1565 aa18.37■□□□□ 0.53
GPN1-201ENST00000264718 PCDHB15Q9Y5E8 787 aa18.37■□□□□ 0.53
GPN1-201ENST00000264718 ASXL1Q8IXJ9 1541 aa18.37■□□□□ 0.53
GPN1-201ENST00000264718 GPATCH8Q9UKJ3 1502 aaKnown RBP18.37■□□□□ 0.53
GPN1-201ENST00000264718 MAGI2Q86UL8 1455 aa18.36■□□□□ 0.53
GPN1-201ENST00000264718 TROQ12816 1431 aaPredicted RBP18.36■□□□□ 0.53
GPN1-201ENST00000264718 NPC1L1Q9UHC9 1359 aa18.36■□□□□ 0.53
GPN1-201ENST00000264718 NUP153P49790 1475 aaKnown RBP18.36■□□□□ 0.53
GPN1-201ENST00000264718 ADCY10Q96PN6 1610 aa18.36■□□□□ 0.53
GPN1-201ENST00000264718 AMER1Q5JTC6 1135 aaPredicted RBP18.35■□□□□ 0.53
GPN1-201ENST00000264718 RAPGEF6Q8TEU7 1601 aa18.35■□□□□ 0.53
GPN1-201ENST00000264718 MCM5P33992 734 aa18.35■□□□□ 0.53
GPN1-201ENST00000264718 CCDC146Q8IYE0 955 aa18.35■□□□□ 0.53
GPN1-201ENST00000264718 DNAJC5Q9H3Z4 198 aa18.34■□□□□ 0.53
GPN1-201ENST00000264718 RBM25P49756 843 aaKnown RBP18.34■□□□□ 0.53
GPN1-201ENST00000264718 DMTNQ08495 405 aa18.34■□□□□ 0.53
GPN1-201ENST00000264718 HSP90AB1P08238 724 aaKnown RBP18.33■□□□□ 0.53
GPN1-201ENST00000264718 KLHL40Q2TBA0 621 aa18.33■□□□□ 0.53
GPN1-201ENST00000264718 CCDC141Q6ZP82 1450 aa18.33■□□□□ 0.52
GPN1-201ENST00000264718 C9orf84Q5VXU9 1444 aa18.32■□□□□ 0.52
GPN1-201ENST00000264718 A2MP01023 1474 aa18.32■□□□□ 0.52
GPN1-201ENST00000264718 RNF17Q9BXT8 1623 aaKnown RBP18.31■□□□□ 0.52
GPN1-201ENST00000264718 TNNT2P45379 298 aaPredicted RBP18.31■□□□□ 0.52
GPN1-201ENST00000264718 CLEC17AQ6ZS10 378 aa18.31■□□□□ 0.52
GPN1-201ENST00000264718 CCDC94Q9BW85 323 aaPredicted RBP18.31■□□□□ 0.52
GPN1-201ENST00000264718 ZNF445P59923 1031 aa18.31■□□□□ 0.52
GPN1-201ENST00000264718 CDCA8Q53HL2 280 aa18.31■□□□□ 0.52
GPN1-201ENST00000264718 SASS6Q6UVJ0 657 aa18.31■□□□□ 0.52
GPN1-201ENST00000264718 MYO5CQ9NQX4 1742 aa18.31■□□□□ 0.52
GPN1-201ENST00000264718 ARHGAP31Q2M1Z3 1444 aa18.3■□□□□ 0.52
GPN1-201ENST00000264718 CDC42BPAQ5VT25 1732 aa18.3■□□□□ 0.52
GPN1-201ENST00000264718 RARSP54136 660 aaKnown RBP18.29■□□□□ 0.52
GPN1-201ENST00000264718 PDLIM2Q96JY6 352 aa18.29■□□□□ 0.52
GPN1-201ENST00000264718 ZKSCAN5Q9Y2L8 839 aa18.28■□□□□ 0.52
GPN1-201ENST00000264718 ZNF777Q9ULD5 760 aaPredicted RBP18.28■□□□□ 0.52
GPN1-201ENST00000264718 DDX49Q9Y6V7 483 aaKnown RBP18.28■□□□□ 0.52
GPN1-201ENST00000264718 PLB1Q6P1J6 1458 aa18.27■□□□□ 0.52
GPN1-201ENST00000264718 CYB5RLQ6IPT4 315 aa18.27■□□□□ 0.51
GPN1-201ENST00000264718 ZHX1Q9UKY1 873 aaPredicted RBP18.27■□□□□ 0.51
GPN1-201ENST00000264718 WWC1Q8IX03 1113 aa18.26■□□□□ 0.51
GPN1-201ENST00000264718 DMRT2Q9Y5R5 561 aa18.26■□□□□ 0.51
GPN1-201ENST00000264718 XPCQ01831 940 aaPredicted RBP18.26■□□□□ 0.51
GPN1-201ENST00000264718 GTPBP4Q9BZE4 634 aaKnown RBP18.26■□□□□ 0.51
GPN1-201ENST00000264718 KIF20AO95235 890 aa18.25■□□□□ 0.51
GPN1-201ENST00000264718 RLBP1P12271 317 aa18.25■□□□□ 0.51
GPN1-201ENST00000264718 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.24■□□□□ 0.51
GPN1-201ENST00000264718 MVPQ14764 893 aaKnown RBP18.24■□□□□ 0.51
GPN1-201ENST00000264718 ZSCAN20P17040 1043 aaPredicted RBP18.23■□□□□ 0.51
GPN1-201ENST00000264718 PDE4CQ08493 712 aa18.23■□□□□ 0.51
GPN1-201ENST00000264718 CCDC39Q9UFE4 941 aa18.23■□□□□ 0.51
GPN1-201ENST00000264718 HDAC1Q13547 482 aaPredicted RBP18.23■□□□□ 0.51
GPN1-201ENST00000264718 IQGAP1P46940 1657 aa18.22■□□□□ 0.51
GPN1-201ENST00000264718 RGL3Q3MIN7 710 aa18.22■□□□□ 0.51
GPN1-201ENST00000264718 PRDM10Q9NQV6 1147 aa18.22■□□□□ 0.51
GPN1-201ENST00000264718 K7ELQ4 463 aaPredicted RBP18.22■□□□□ 0.51
GPN1-201ENST00000264718 TSPY4P0CV99 314 aa18.22■□□□□ 0.51
GPN1-201ENST00000264718 TSPY10P0CW01 314 aa18.22■□□□□ 0.51
GPN1-201ENST00000264718 MYOM1P52179 1685 aa18.21■□□□□ 0.51
GPN1-201ENST00000264718 BAG4O95429 457 aaKnown RBP18.21■□□□□ 0.5
GPN1-201ENST00000264718 LETM1O95202 739 aaPredicted RBP18.2■□□□□ 0.5
GPN1-201ENST00000264718 ABCA8O94911 1581 aa18.19■□□□□ 0.5
GPN1-201ENST00000264718 SSFA2P28290 1259 aa18.18■□□□□ 0.5
GPN1-201ENST00000264718 ZSCAN23Q3MJ62 389 aa18.18■□□□□ 0.5
GPN1-201ENST00000264718 ARHGEF5Q12774 1597 aa18.18■□□□□ 0.5
GPN1-201ENST00000264718 KANK1Q14678 1352 aa18.18■□□□□ 0.5
GPN1-201ENST00000264718 WDR63Q8IWG1 891 aa18.18■□□□□ 0.5
GPN1-201ENST00000264718 ARID3AQ99856 593 aa18.17■□□□□ 0.5
GPN1-201ENST00000264718 MYRIPQ8NFW9 859 aa18.17■□□□□ 0.5
GPN1-201ENST00000264718 ZKSCAN2Q63HK3 967 aa18.16■□□□□ 0.5
GPN1-201ENST00000264718 FTSJ3Q8IY81 847 aaKnown RBP18.16■□□□□ 0.5
GPN1-201ENST00000264718 RBSNQ9H1K0 784 aa18.16■□□□□ 0.5
GPN1-201ENST00000264718 PLA2R1Q13018 1463 aa18.16■□□□□ 0.5
GPN1-201ENST00000264718 POLR3AO14802 1390 aaPredicted RBP18.16■□□□□ 0.5
GPN1-201ENST00000264718 PRIMPOLQ96LW4 560 aa18.15■□□□□ 0.5
GPN1-201ENST00000264718 TNNQ9UQP3 1299 aa18.15■□□□□ 0.5
GPN1-201ENST00000264718 UNC13BO14795 1591 aa18.15■□□□□ 0.5
GPN1-201ENST00000264718 NUCB2P80303 420 aa18.15■□□□□ 0.5
GPN1-201ENST00000264718 HMGN5P82970 282 aaKnown RBP18.15■□□□□ 0.5
GPN1-201ENST00000264718 PPP4R3BQ5MIZ7 849 aa18.15■□□□□ 0.5
GPN1-201ENST00000264718 CAVIN1Q6NZI2 390 aaKnown RBP18.15■□□□□ 0.5
GPN1-201ENST00000264718 DZIP1LQ8IYY4 767 aaKnown RBP18.15■□□□□ 0.5
GPN1-201ENST00000264718 KIF16BQ96L93 1317 aa18.15■□□□□ 0.5
GPN1-201ENST00000264718 KDM5AP29375 1690 aaKnown RBP18.15■□□□□ 0.5
GPN1-201ENST00000264718 TAF3Q5VWG9 929 aa18.14■□□□□ 0.5
GPN1-201ENST00000264718 BBXQ8WY36 941 aaPredicted RBP18.14■□□□□ 0.5
GPN1-201ENST00000264718 KIAA2012Q0VF49 1180 aa18.13■□□□□ 0.49
GPN1-201ENST00000264718 KIF2CQ99661 725 aa18.13■□□□□ 0.49
GPN1-201ENST00000264718 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
GPN1-201ENST00000264718 IQSEC2Q5JU85 1478 aa18.13■□□□□ 0.49
GPN1-201ENST00000264718 CT47B1P0C2W7 299 aaPredicted RBP18.13■□□□□ 0.49
GPN1-201ENST00000264718 DDX19BQ9UMR2 479 aa18.13■□□□□ 0.49
GPN1-201ENST00000264718 ATP10AO60312 1499 aa18.12■□□□□ 0.49
GPN1-201ENST00000264718 RUNDC1Q96C34 613 aa18.12■□□□□ 0.49
GPN1-201ENST00000264718 GTF2F1P35269 517 aaKnown RBP eCLIP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms