RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 USP32Q8NFA0 1604 aa11.37□□□□□ -0.59
COPS4-201ENST00000264389 EVC2Q86UK5 1308 aa11.37□□□□□ -0.59
COPS4-201ENST00000264389 METP08581 1390 aa11.36□□□□□ -0.59
COPS4-201ENST00000264389 TXNDC2Q86VQ3 553 aa11.36□□□□□ -0.59
COPS4-201ENST00000264389 XRN1Q8IZH2 1706 aaKnown RBP11.36□□□□□ -0.59
COPS4-201ENST00000264389 ABCC11Q96J66 1382 aa11.36□□□□□ -0.59
COPS4-201ENST00000264389 MED14O60244 1454 aa11.35□□□□□ -0.59
COPS4-201ENST00000264389 LTKP29376 864 aa11.35□□□□□ -0.59
COPS4-201ENST00000264389 CNGB1Q14028 1251 aaPredicted RBP11.35□□□□□ -0.59
COPS4-201ENST00000264389 PRAM1Q96QH2 718 aa11.35□□□□□ -0.59
COPS4-201ENST00000264389 PANK3Q9H999 370 aa11.35□□□□□ -0.59
COPS4-201ENST00000264389 POGKQ9P215 609 aa11.35□□□□□ -0.59
COPS4-201ENST00000264389 DCAF8L1A6NGE4 600 aa11.35□□□□□ -0.59
COPS4-201ENST00000264389 SAFB2Q14151 953 aaKnown RBP eCLIP11.35□□□□□ -0.59
COPS4-201ENST00000264389 ADGRB2O60241 1585 aa11.34□□□□□ -0.59
COPS4-201ENST00000264389 FOXD4L1Q9NU39 408 aa11.34□□□□□ -0.59
COPS4-201ENST00000264389 ITSN1Q15811 1721 aa11.34□□□□□ -0.59
COPS4-201ENST00000264389 FAM135BQ49AJ0 1406 aa11.34□□□□□ -0.59
COPS4-201ENST00000264389 CHD2O14647 1828 aaKnown RBP11.33□□□□□ -0.59
COPS4-201ENST00000264389 ANKRD26Q9UPS8 1709 aa11.33□□□□□ -0.6
COPS4-201ENST00000264389 MINK1Q8N4C8 1332 aaPredicted RBP11.33□□□□□ -0.6
COPS4-201ENST00000264389 KIF20BQ96Q89 1820 aa11.33□□□□□ -0.6
COPS4-201ENST00000264389 PARD3Q8TEW0 1356 aa11.33□□□□□ -0.6
COPS4-201ENST00000264389 PER1O15534 1290 aaPredicted RBP11.32□□□□□ -0.6
COPS4-201ENST00000264389 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.32□□□□□ -0.6
COPS4-201ENST00000264389 RALBP1Q15311 655 aa11.32□□□□□ -0.6
COPS4-201ENST00000264389 PUS7Q96PZ0 661 aaKnown RBP11.32□□□□□ -0.6
COPS4-201ENST00000264389 KNSTRNQ9Y448 316 aa11.32□□□□□ -0.6
COPS4-201ENST00000264389 ATAD2Q6PL18 1390 aa11.32□□□□□ -0.6
COPS4-201ENST00000264389 PLEKHH1Q9ULM0 1364 aa11.32□□□□□ -0.6
COPS4-201ENST00000264389 NINLQ9Y2I6 1382 aa11.32□□□□□ -0.6
COPS4-201ENST00000264389 MYBBP1AQ9BQG0 1328 aaKnown RBP11.31□□□□□ -0.6
COPS4-201ENST00000264389 MRS2Q9HD23 443 aa11.31□□□□□ -0.6
COPS4-201ENST00000264389 TOPAZ1Q8N9V7 1692 aa11.3□□□□□ -0.6
COPS4-201ENST00000264389 PTCH1Q13635 1447 aa11.3□□□□□ -0.6
COPS4-201ENST00000264389 SLC4A2P04920 1241 aa11.3□□□□□ -0.6
COPS4-201ENST00000264389 SRPK2P78362 688 aaKnown RBP11.3□□□□□ -0.6
COPS4-201ENST00000264389 TMC1Q8TDI8 760 aa11.3□□□□□ -0.6
COPS4-201ENST00000264389 AKAP12Q02952 1782 aa11.3□□□□□ -0.6
COPS4-201ENST00000264389 PTPRUQ92729 1446 aa11.3□□□□□ -0.6
COPS4-201ENST00000264389 NSD3Q9BZ95 1437 aa11.3□□□□□ -0.6
COPS4-201ENST00000264389 SLC26A8Q96RN1 970 aa11.29□□□□□ -0.6
COPS4-201ENST00000264389 CABP2Q9NPB3 220 aa11.29□□□□□ -0.6
COPS4-201ENST00000264389 ANKRD36BQ8N2N9 1353 aa11.29□□□□□ -0.6
COPS4-201ENST00000264389 NPC1L1Q9UHC9 1359 aa11.29□□□□□ -0.6
COPS4-201ENST00000264389 MON2Q7Z3U7 1717 aa11.29□□□□□ -0.6
COPS4-201ENST00000264389 CC2D1BQ5T0F9 858 aaKnown RBP11.29□□□□□ -0.6
COPS4-201ENST00000264389 WAPLQ7Z5K2 1190 aa11.29□□□□□ -0.6
COPS4-201ENST00000264389 BRD4O60885 1362 aaPredicted RBP11.28□□□□□ -0.6
COPS4-201ENST00000264389 ROBO2Q9HCK4 1378 aa11.28□□□□□ -0.6
COPS4-201ENST00000264389 CCDC184Q52MB2 194 aa11.28□□□□□ -0.6
COPS4-201ENST00000264389 ANKLE2Q86XL3 938 aa11.28□□□□□ -0.6
COPS4-201ENST00000264389 SIRT1Q96EB6 747 aa11.28□□□□□ -0.6
COPS4-201ENST00000264389 TBX22Q9Y458 520 aa11.28□□□□□ -0.6
COPS4-201ENST00000264389 PIK3R4Q99570 1358 aa11.27□□□□□ -0.6
COPS4-201ENST00000264389 NALCNQ8IZF0 1738 aa11.27□□□□□ -0.61
COPS4-201ENST00000264389 SLC12A5Q9H2X9 1139 aa11.26□□□□□ -0.61
COPS4-201ENST00000264389 ATP7BP35670 1465 aa11.26□□□□□ -0.61
COPS4-201ENST00000264389 NPHP4O75161 1426 aaPredicted RBP11.26□□□□□ -0.61
COPS4-201ENST00000264389 RGPD8O14715 1765 aaPredicted RBP11.26□□□□□ -0.61
COPS4-201ENST00000264389 CDC42BPGQ6DT37 1551 aa11.26□□□□□ -0.61
COPS4-201ENST00000264389 AMER1Q5JTC6 1135 aaPredicted RBP11.26□□□□□ -0.61
COPS4-201ENST00000264389 CDK19Q9BWU1 502 aa11.26□□□□□ -0.61
COPS4-201ENST00000264389 NWD1Q149M9 1564 aa11.25□□□□□ -0.61
COPS4-201ENST00000264389 FMN2Q9NZ56 1722 aa11.25□□□□□ -0.61
COPS4-201ENST00000264389 A0A1W2PP64 1363 aa11.25□□□□□ -0.61
COPS4-201ENST00000264389 NLRP13Q86W25 1043 aa11.25□□□□□ -0.61
COPS4-201ENST00000264389 CD163L1Q9NR16 1453 aa11.24□□□□□ -0.61
COPS4-201ENST00000264389 FAM9BQ8IZU0 186 aa11.24□□□□□ -0.61
COPS4-201ENST00000264389 AMOTL2Q9Y2J4 779 aa11.24□□□□□ -0.61
COPS4-201ENST00000264389 WASLO00401 505 aaPredicted RBP11.23□□□□□ -0.61
COPS4-201ENST00000264389 CARD14Q9BXL6 1004 aa11.23□□□□□ -0.61
COPS4-201ENST00000264389 PPIP5K1Q6PFW1 1433 aa11.23□□□□□ -0.61
COPS4-201ENST00000264389 NSD2O96028 1365 aa11.23□□□□□ -0.61
COPS4-201ENST00000264389 NRKQ7Z2Y5 1582 aa11.22□□□□□ -0.61
COPS4-201ENST00000264389 TERF2IPQ9NYB0 399 aa11.22□□□□□ -0.61
COPS4-201ENST00000264389 CGNL1Q0VF96 1302 aa11.22□□□□□ -0.61
COPS4-201ENST00000264389 HDGFL2Q7Z4V5 671 aaPredicted RBP11.21□□□□□ -0.61
COPS4-201ENST00000264389 HNRNPUQ00839 825 aaKnown RBP eCLIP11.21□□□□□ -0.62
COPS4-201ENST00000264389 PPP2R1AP30153 589 aa11.2□□□□□ -0.62
COPS4-201ENST00000264389 SHPRHQ149N8 1683 aa11.19□□□□□ -0.62
COPS4-201ENST00000264389 KCNA6P17658 529 aa11.19□□□□□ -0.62
COPS4-201ENST00000264389 NCKAP5LQ9HCH0 1330 aa11.19□□□□□ -0.62
COPS4-201ENST00000264389 NUDT16Q96DE0 195 aaKnown RBP11.18□□□□□ -0.62
COPS4-201ENST00000264389 CABP1Q9NZU7 370 aa11.18□□□□□ -0.62
COPS4-201ENST00000264389 STRCQ7RTU9 1775 aa11.18□□□□□ -0.62
COPS4-201ENST00000264389 NKTRP30414 1462 aaKnown RBP11.18□□□□□ -0.62
COPS4-201ENST00000264389 LMTK3Q96Q04 1460 aa11.18□□□□□ -0.62
COPS4-201ENST00000264389 STRCP1A6NGW2 1772 aa11.18□□□□□ -0.62
COPS4-201ENST00000264389 PNISRQ8TF01 805 aaKnown RBP11.18□□□□□ -0.62
COPS4-201ENST00000264389 CPSF1Q10570 1443 aaKnown RBP11.17□□□□□ -0.62
COPS4-201ENST00000264389 EDC4Q6P2E9 1401 aaKnown RBP11.17□□□□□ -0.62
COPS4-201ENST00000264389 MAP2P11137 1827 aaKnown RBP11.17□□□□□ -0.62
COPS4-201ENST00000264389 KDM4FA0A1W2PPD8 638 aa11.17□□□□□ -0.62
COPS4-201ENST00000264389 MORC1Q86VD1 984 aa11.17□□□□□ -0.62
COPS4-201ENST00000264389 PRR36Q9H6K5 1346 aa11.17□□□□□ -0.62
COPS4-201ENST00000264389 ANKARQ7Z5J8 1434 aa11.16□□□□□ -0.62
COPS4-201ENST00000264389 CCDC61Q9Y6R9 512 aa11.16□□□□□ -0.62
COPS4-201ENST00000264389 ADGRL3Q9HAR2 1447 aa11.16□□□□□ -0.62
COPS4-201ENST00000264389 BLMP54132 1417 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms