RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 SLC26A8Q96RN1 970 aa12.43□□□□□ -0.42
SIM1-201ENST00000262901 SCAF11Q99590 1463 aaKnown RBP12.43□□□□□ -0.42
SIM1-201ENST00000262901 CCDC7Q96M83 1385 aa12.42□□□□□ -0.42
SIM1-201ENST00000262901 EVC2Q86UK5 1308 aa12.42□□□□□ -0.42
SIM1-201ENST00000262901 MYOM2P54296 1465 aa12.42□□□□□ -0.42
SIM1-201ENST00000262901 TMEM2Q9UHN6 1383 aa12.42□□□□□ -0.42
SIM1-201ENST00000262901 KIF7Q2M1P5 1343 aa12.42□□□□□ -0.42
SIM1-201ENST00000262901 RGS3P49796 1198 aa12.42□□□□□ -0.42
SIM1-201ENST00000262901 KNSTRNQ9Y448 316 aa12.42□□□□□ -0.42
SIM1-201ENST00000262901 ADGRB3O60242 1522 aa12.41□□□□□ -0.42
SIM1-201ENST00000262901 MINK1Q8N4C8 1332 aaPredicted RBP12.4□□□□□ -0.42
SIM1-201ENST00000262901 WASHC2AQ641Q2 1341 aa12.4□□□□□ -0.42
SIM1-201ENST00000262901 PREX1Q8TCU6 1659 aa12.4□□□□□ -0.42
SIM1-201ENST00000262901 TNNT2P45379 298 aaPredicted RBP12.4□□□□□ -0.42
SIM1-201ENST00000262901 PRAM1Q96QH2 718 aa12.4□□□□□ -0.42
SIM1-201ENST00000262901 NOP58Q9Y2X3 529 aaKnown RBP12.39□□□□□ -0.43
SIM1-201ENST00000262901 GPRASP1Q5JY77 1395 aa12.39□□□□□ -0.43
SIM1-201ENST00000262901 SPATA31D1Q6ZQQ2 1576 aa12.39□□□□□ -0.43
SIM1-201ENST00000262901 BBXQ8WY36 941 aaPredicted RBP12.39□□□□□ -0.43
SIM1-201ENST00000262901 A2ML1A8K2U0 1454 aa12.39□□□□□ -0.43
SIM1-201ENST00000262901 SYNMO15061 1565 aa12.38□□□□□ -0.43
SIM1-201ENST00000262901 ZFYVE9O95405 1425 aa12.37□□□□□ -0.43
SIM1-201ENST00000262901 BRPF3Q9ULD4 1205 aa12.37□□□□□ -0.43
SIM1-201ENST00000262901 FER1L4A9Z1Z3 1794 aa12.37□□□□□ -0.43
SIM1-201ENST00000262901 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.36□□□□□ -0.43
SIM1-201ENST00000262901 PIK3C2GO75747 1445 aa12.36□□□□□ -0.43
SIM1-201ENST00000262901 HDGFL2Q7Z4V5 671 aaPredicted RBP12.35□□□□□ -0.43
SIM1-201ENST00000262901 NEURL4Q96JN8 1562 aa12.35□□□□□ -0.43
SIM1-201ENST00000262901 LTKP29376 864 aa12.35□□□□□ -0.43
SIM1-201ENST00000262901 RIMS1Q86UR5 1692 aaKnown RBP12.35□□□□□ -0.43
SIM1-201ENST00000262901 TBX22Q9Y458 520 aa12.35□□□□□ -0.43
SIM1-201ENST00000262901 MADDQ8WXG6 1647 aa12.34□□□□□ -0.43
SIM1-201ENST00000262901 ZFP91Q96JP5 570 aaPredicted RBP12.34□□□□□ -0.43
SIM1-201ENST00000262901 GTF2E1P29083 439 aaPredicted RBP12.34□□□□□ -0.43
SIM1-201ENST00000262901 FRAT1Q92837 279 aaPredicted RBP12.34□□□□□ -0.43
SIM1-201ENST00000262901 TERF2IPQ9NYB0 399 aa12.34□□□□□ -0.43
SIM1-201ENST00000262901 PANK3Q9H999 370 aa12.33□□□□□ -0.44
SIM1-201ENST00000262901 AMOTL2Q9Y2J4 779 aa12.33□□□□□ -0.44
SIM1-201ENST00000262901 PTPRMP28827 1452 aa12.33□□□□□ -0.44
SIM1-201ENST00000262901 PIK3C2BO00750 1634 aa12.33□□□□□ -0.44
SIM1-201ENST00000262901 C11orf95C9JLR9 678 aaPredicted RBP12.33□□□□□ -0.44
SIM1-201ENST00000262901 PLEKHG1Q9ULL1 1385 aa12.33□□□□□ -0.44
SIM1-201ENST00000262901 YTHDC2Q9H6S0 1430 aaKnown RBP12.32□□□□□ -0.44
SIM1-201ENST00000262901 WAPLQ7Z5K2 1190 aa12.32□□□□□ -0.44
SIM1-201ENST00000262901 CABP2Q9NPB3 220 aa12.32□□□□□ -0.44
SIM1-201ENST00000262901 LRPPRCP42704 1394 aaKnown RBP12.32□□□□□ -0.44
SIM1-201ENST00000262901 MROH2AA6NES4 1674 aa12.31□□□□□ -0.44
SIM1-201ENST00000262901 KTN1Q86UP2 1357 aaKnown RBP12.31□□□□□ -0.44
SIM1-201ENST00000262901 PPM1GO15355 546 aaPredicted RBP12.31□□□□□ -0.44
SIM1-201ENST00000262901 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
SIM1-201ENST00000262901 HSPA2P54652 639 aa12.3□□□□□ -0.44
SIM1-201ENST00000262901 TESK2Q96S53 571 aa12.3□□□□□ -0.44
SIM1-201ENST00000262901 NEXMIFQ5QGS0 1516 aa12.3□□□□□ -0.44
SIM1-201ENST00000262901 NCKAP5LQ9HCH0 1330 aa12.3□□□□□ -0.44
SIM1-201ENST00000262901 NUTM2FA1L443 756 aa12.3□□□□□ -0.44
SIM1-201ENST00000262901 PROSER2Q86WR7 435 aaPredicted RBP12.29□□□□□ -0.44
SIM1-201ENST00000262901 CDK19Q9BWU1 502 aa12.29□□□□□ -0.44
SIM1-201ENST00000262901 SIGLEC1Q9BZZ2 1709 aa12.29□□□□□ -0.44
SIM1-201ENST00000262901 DDRGK1Q96HY6 314 aa12.29□□□□□ -0.44
SIM1-201ENST00000262901 TMEM131LA2VDJ0 1609 aa12.29□□□□□ -0.44
SIM1-201ENST00000262901 TRPM1Q7Z4N2 1603 aa12.29□□□□□ -0.44
SIM1-201ENST00000262901 ATAD2Q6PL18 1390 aa12.28□□□□□ -0.44
SIM1-201ENST00000262901 RALBP1Q15311 655 aa12.28□□□□□ -0.44
SIM1-201ENST00000262901 DISP3Q9P2K9 1392 aa12.28□□□□□ -0.44
SIM1-201ENST00000262901 ABCC11Q96J66 1382 aa12.28□□□□□ -0.44
SIM1-201ENST00000262901 SETD1BQ9UPS6 1966 aaKnown RBP12.27□□□□□ -0.44
SIM1-201ENST00000262901 NGDNQ8NEJ9 315 aaKnown RBP12.27□□□□□ -0.45
SIM1-201ENST00000262901 DMRT2Q9Y5R5 561 aa12.27□□□□□ -0.45
SIM1-201ENST00000262901 NRXN1Q9ULB1 1477 aa12.26□□□□□ -0.45
SIM1-201ENST00000262901 PRKRIP1Q9H875 184 aaPredicted RBP12.26□□□□□ -0.45
SIM1-201ENST00000262901 C3P01024 1663 aa12.26□□□□□ -0.45
SIM1-201ENST00000262901 MORC1Q86VD1 984 aa12.26□□□□□ -0.45
SIM1-201ENST00000262901 RCAN3Q9UKA8 241 aa12.26□□□□□ -0.45
SIM1-201ENST00000262901 PRDM4Q9UKN5 801 aa12.26□□□□□ -0.45
SIM1-201ENST00000262901 HSP90AA2PQ14568 343 aaPredicted RBP12.26□□□□□ -0.45
SIM1-201ENST00000262901 METP08581 1390 aa12.25□□□□□ -0.45
SIM1-201ENST00000262901 CEP170BQ9Y4F5 1589 aaPredicted RBP12.25□□□□□ -0.45
SIM1-201ENST00000262901 WASLO00401 505 aaPredicted RBP12.25□□□□□ -0.45
SIM1-201ENST00000262901 SECISBP2LQ93073 1101 aaKnown RBP12.25□□□□□ -0.45
SIM1-201ENST00000262901 SIRT1Q96EB6 747 aa12.25□□□□□ -0.45
SIM1-201ENST00000262901 SLC12A5Q9H2X9 1139 aa12.25□□□□□ -0.45
SIM1-201ENST00000262901 IPO4Q8TEX9 1081 aaKnown RBP12.25□□□□□ -0.45
SIM1-201ENST00000262901 ANP32BQ92688 251 aaKnown RBP12.25□□□□□ -0.45
SIM1-201ENST00000262901 NPHP4O75161 1426 aaPredicted RBP12.25□□□□□ -0.45
SIM1-201ENST00000262901 SBNO2Q9Y2G9 1366 aa12.25□□□□□ -0.45
SIM1-201ENST00000262901 CGNL1Q0VF96 1302 aa12.24□□□□□ -0.45
SIM1-201ENST00000262901 PUS7Q96PZ0 661 aaKnown RBP12.24□□□□□ -0.45
SIM1-201ENST00000262901 NUDCQ9Y266 331 aa12.24□□□□□ -0.45
SIM1-201ENST00000262901 ALKQ9UM73 1620 aa12.24□□□□□ -0.45
SIM1-201ENST00000262901 SETBP1Q9Y6X0 1596 aa12.24□□□□□ -0.45
SIM1-201ENST00000262901 PPLO60437 1756 aa12.23□□□□□ -0.45
SIM1-201ENST00000262901 LAMC1P11047 1609 aa12.23□□□□□ -0.45
SIM1-201ENST00000262901 KCNA6P17658 529 aa12.23□□□□□ -0.45
SIM1-201ENST00000262901 ATF3P18847 181 aa12.23□□□□□ -0.45
SIM1-201ENST00000262901 BECN1Q14457 450 aa12.23□□□□□ -0.45
SIM1-201ENST00000262901 KDM4FA0A1W2PPD8 638 aa12.23□□□□□ -0.45
SIM1-201ENST00000262901 FTSJ3Q8IY81 847 aaKnown RBP12.23□□□□□ -0.45
SIM1-201ENST00000262901 TAOK2Q9UL54 1235 aa12.23□□□□□ -0.45
SIM1-201ENST00000262901 CCDC61Q9Y6R9 512 aa12.23□□□□□ -0.45
SIM1-201ENST00000262901 CFAP53Q96M91 514 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms