RNA–Protein interactions for RNA: ENST00000261884.7

TRIP4-201, Transcript of thyroid hormone receptor interactor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIP4, Length 2,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-201ENST00000261884 PTPRUQ92729 1446 aa25.99■■□□□ 1.75
TRIP4-201ENST00000261884 CCER2I3L3R5 266 aa25.98■■□□□ 1.75
TRIP4-201ENST00000261884 PTCH1Q13635 1447 aa25.98■■□□□ 1.75
TRIP4-201ENST00000261884 SAFB2Q14151 953 aaKnown RBP eCLIP25.97■■□□□ 1.75
TRIP4-201ENST00000261884 AMOTL2Q9Y2J4 779 aa25.97■■□□□ 1.75
TRIP4-201ENST00000261884 EVC2Q86UK5 1308 aa25.97■■□□□ 1.75
TRIP4-201ENST00000261884 HSPA2P54652 639 aa25.97■■□□□ 1.75
TRIP4-201ENST00000261884 WAPLQ7Z5K2 1190 aa25.95■■□□□ 1.75
TRIP4-201ENST00000261884 ROBO2Q9HCK4 1378 aa25.95■■□□□ 1.74
TRIP4-201ENST00000261884 PUS7Q96PZ0 661 aaKnown RBP25.95■■□□□ 1.74
TRIP4-201ENST00000261884 XRN1Q8IZH2 1706 aaKnown RBP25.94■■□□□ 1.74
TRIP4-201ENST00000261884 PLEKHH1Q9ULM0 1364 aa25.94■■□□□ 1.74
TRIP4-201ENST00000261884 TULP4Q9NRJ4 1543 aa25.93■■□□□ 1.74
TRIP4-201ENST00000261884 MINK1Q8N4C8 1332 aaPredicted RBP25.92■■□□□ 1.74
TRIP4-201ENST00000261884 CHD2O14647 1828 aaKnown RBP25.9■■□□□ 1.74
TRIP4-201ENST00000261884 KCNA6P17658 529 aa25.88■■□□□ 1.73
TRIP4-201ENST00000261884 SRPK2P78362 688 aaKnown RBP25.84■■□□□ 1.73
TRIP4-201ENST00000261884 ADGRB2O60241 1585 aa25.84■■□□□ 1.73
TRIP4-201ENST00000261884 ATAD2Q6PL18 1390 aa25.83■■□□□ 1.73
TRIP4-201ENST00000261884 MYOM1P52179 1685 aa25.83■■□□□ 1.73
TRIP4-201ENST00000261884 NWD1Q149M9 1564 aa25.83■■□□□ 1.73
TRIP4-201ENST00000261884 ANP32CO43423 234 aa25.83■■□□□ 1.73
TRIP4-201ENST00000261884 FKBP8Q14318 412 aa25.83■■□□□ 1.73
TRIP4-201ENST00000261884 STRCQ7RTU9 1775 aa25.82■■□□□ 1.72
TRIP4-201ENST00000261884 CDK19Q9BWU1 502 aa25.82■■□□□ 1.72
TRIP4-201ENST00000261884 CABP2Q9NPB3 220 aa25.82■■□□□ 1.72
TRIP4-201ENST00000261884 WASLO00401 505 aaPredicted RBP25.81■■□□□ 1.72
TRIP4-201ENST00000261884 NINLQ9Y2I6 1382 aa25.81■■□□□ 1.72
TRIP4-201ENST00000261884 PANK3Q9H999 370 aa25.8■■□□□ 1.72
TRIP4-201ENST00000261884 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.8■■□□□ 1.72
TRIP4-201ENST00000261884 NKTRP30414 1462 aaKnown RBP25.78■■□□□ 1.72
TRIP4-201ENST00000261884 TMC1Q8TDI8 760 aa25.76■■□□□ 1.72
TRIP4-201ENST00000261884 PER1O15534 1290 aaPredicted RBP25.75■■□□□ 1.71
TRIP4-201ENST00000261884 SLC12A5Q9H2X9 1139 aa25.73■■□□□ 1.71
TRIP4-201ENST00000261884 DMRT2Q9Y5R5 561 aa25.73■■□□□ 1.71
TRIP4-201ENST00000261884 ANKRD36BQ8N2N9 1353 aa25.71■■□□□ 1.71
TRIP4-201ENST00000261884 KNSTRNQ9Y448 316 aa25.7■■□□□ 1.7
TRIP4-201ENST00000261884 PRKRIP1Q9H875 184 aaPredicted RBP25.69■■□□□ 1.7
TRIP4-201ENST00000261884 ADGRL3Q9HAR2 1447 aa25.69■■□□□ 1.7
TRIP4-201ENST00000261884 ATP7BP35670 1465 aa25.68■■□□□ 1.7
TRIP4-201ENST00000261884 NUDT16Q96DE0 195 aaKnown RBP25.68■■□□□ 1.7
TRIP4-201ENST00000261884 CCDC61Q9Y6R9 512 aa25.68■■□□□ 1.7
TRIP4-201ENST00000261884 ANP32EQ9BTT0 268 aa25.68■■□□□ 1.7
TRIP4-201ENST00000261884 NEFLP07196 543 aa25.67■■□□□ 1.7
TRIP4-201ENST00000261884 PROSER2Q86WR7 435 aaPredicted RBP25.67■■□□□ 1.7
TRIP4-201ENST00000261884 CDC42BPGQ6DT37 1551 aa25.67■■□□□ 1.7
TRIP4-201ENST00000261884 TERF2IPQ9NYB0 399 aa25.66■■□□□ 1.7
TRIP4-201ENST00000261884 KTN1Q86UP2 1357 aaKnown RBP25.66■■□□□ 1.7
TRIP4-201ENST00000261884 NALCNQ8IZF0 1738 aa25.66■■□□□ 1.7
TRIP4-201ENST00000261884 CABP1Q9NZU7 370 aa25.65■■□□□ 1.7
TRIP4-201ENST00000261884 PPIP5K1Q6PFW1 1433 aa25.64■■□□□ 1.7
TRIP4-201ENST00000261884 NCOA3Q9Y6Q9 1424 aa25.64■■□□□ 1.7
TRIP4-201ENST00000261884 CARD14Q9BXL6 1004 aa25.64■■□□□ 1.69
TRIP4-201ENST00000261884 PRR36Q9H6K5 1346 aa25.63■■□□□ 1.69
TRIP4-201ENST00000261884 ANKARQ7Z5J8 1434 aa25.63■■□□□ 1.69
TRIP4-201ENST00000261884 A0A1W2PP64 1363 aa25.63■■□□□ 1.69
TRIP4-201ENST00000261884 NPC1L1Q9UHC9 1359 aa25.63■■□□□ 1.69
TRIP4-201ENST00000261884 C14orf37Q86TY3 774 aa25.63■■□□□ 1.69
TRIP4-201ENST00000261884 STRCP1A6NGW2 1772 aa25.63■■□□□ 1.69
TRIP4-201ENST00000261884 HDGFL2Q7Z4V5 671 aaPredicted RBP25.62■■□□□ 1.69
TRIP4-201ENST00000261884 CD163L1Q9NR16 1453 aa25.62■■□□□ 1.69
TRIP4-201ENST00000261884 AMER1Q5JTC6 1135 aaPredicted RBP25.61■■□□□ 1.69
TRIP4-201ENST00000261884 RBM33Q96EV2 1170 aaKnown RBP25.61■■□□□ 1.69
TRIP4-201ENST00000261884 NSD3Q9BZ95 1437 aa25.61■■□□□ 1.69
TRIP4-201ENST00000261884 RALBP1Q15311 655 aa25.6■■□□□ 1.69
TRIP4-201ENST00000261884 FMN2Q9NZ56 1722 aa25.6■■□□□ 1.69
TRIP4-201ENST00000261884 TMEM94Q12767 1356 aa25.6■■□□□ 1.69
TRIP4-201ENST00000261884 TOPAZ1Q8N9V7 1692 aa25.59■■□□□ 1.69
TRIP4-201ENST00000261884 USP32Q8NFA0 1604 aa25.58■■□□□ 1.69
TRIP4-201ENST00000261884 PARD3Q8TEW0 1356 aa25.58■■□□□ 1.69
TRIP4-201ENST00000261884 C19orf44Q9H6X5 657 aa25.58■■□□□ 1.68
TRIP4-201ENST00000261884 CPSF1Q10570 1443 aaKnown RBP25.57■■□□□ 1.68
TRIP4-201ENST00000261884 NUTM2FA1L443 756 aa25.57■■□□□ 1.68
TRIP4-201ENST00000261884 ZNF335Q9H4Z2 1342 aaPredicted RBP25.57■■□□□ 1.68
TRIP4-201ENST00000261884 ITSN1Q15811 1721 aa25.56■■□□□ 1.68
TRIP4-201ENST00000261884 PLEKHG3A1L390 1219 aa25.56■■□□□ 1.68
TRIP4-201ENST00000261884 CGNL1Q0VF96 1302 aa25.56■■□□□ 1.68
TRIP4-201ENST00000261884 CNGB1Q14028 1251 aaPredicted RBP25.56■■□□□ 1.68
TRIP4-201ENST00000261884 CC2D1BQ5T0F9 858 aaKnown RBP25.56■■□□□ 1.68
TRIP4-201ENST00000261884 DCCP43146 1447 aa25.55■■□□□ 1.68
TRIP4-201ENST00000261884 ZNF692Q9BU19 519 aaPredicted RBP25.54■■□□□ 1.68
TRIP4-201ENST00000261884 NSD2O96028 1365 aa25.53■■□□□ 1.68
TRIP4-201ENST00000261884 RBM19Q9Y4C8 960 aaKnown RBP25.51■■□□□ 1.67
TRIP4-201ENST00000261884 LRRC7Q96NW7 1537 aa25.51■■□□□ 1.67
TRIP4-201ENST00000261884 MYBBP1AQ9BQG0 1328 aaKnown RBP25.51■■□□□ 1.67
TRIP4-201ENST00000261884 EDC4Q6P2E9 1401 aaKnown RBP25.5■■□□□ 1.67
TRIP4-201ENST00000261884 MSH6P52701 1360 aa25.49■■□□□ 1.67
TRIP4-201ENST00000261884 ACEP12821 1306 aa25.49■■□□□ 1.67
TRIP4-201ENST00000261884 POLR3AO14802 1390 aaPredicted RBP25.48■■□□□ 1.67
TRIP4-201ENST00000261884 AEBP2Q6ZN18 517 aaPredicted RBP25.48■■□□□ 1.67
TRIP4-201ENST00000261884 AKAP12Q02952 1782 aa25.48■■□□□ 1.67
TRIP4-201ENST00000261884 ATF3P18847 181 aa25.47■■□□□ 1.67
TRIP4-201ENST00000261884 RGPD8O14715 1765 aaPredicted RBP25.47■■□□□ 1.67
TRIP4-201ENST00000261884 MON2Q7Z3U7 1717 aa25.47■■□□□ 1.67
TRIP4-201ENST00000261884 CADPS2Q86UW7 1296 aa25.46■■□□□ 1.67
TRIP4-201ENST00000261884 NGDNQ8NEJ9 315 aaKnown RBP25.45■■□□□ 1.66
TRIP4-201ENST00000261884 PMFBP1Q8TBY8 1022 aa25.45■■□□□ 1.66
TRIP4-201ENST00000261884 USP6P35125 1406 aa25.44■■□□□ 1.66
TRIP4-201ENST00000261884 NLRP13Q86W25 1043 aa25.44■■□□□ 1.66
TRIP4-201ENST00000261884 PHF8Q9UPP1 1060 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms