RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 PREX1Q8TCU6 1659 aa14.16□□□□□ -0.14
CHRNA1-201ENST00000261007 QRICH2Q9H0J4 1663 aa14.15□□□□□ -0.14
CHRNA1-201ENST00000261007 GSE1Q14687 1217 aa14.14□□□□□ -0.15
CHRNA1-201ENST00000261007 PPP2R1AP30153 589 aa14.13□□□□□ -0.15
CHRNA1-201ENST00000261007 TMEM131LA2VDJ0 1609 aa14.11□□□□□ -0.15
CHRNA1-201ENST00000261007 RTN4Q9NQC3 1192 aaKnown RBP14.11□□□□□ -0.15
CHRNA1-201ENST00000261007 WDR43Q15061 677 aaKnown RBP eCLIP14.1□□□□□ -0.15
CHRNA1-201ENST00000261007 USP32Q8NFA0 1604 aa14.1□□□□□ -0.15
CHRNA1-201ENST00000261007 ARHGEF28Q8N1W1 1705 aaKnown RBP14.1□□□□□ -0.15
CHRNA1-201ENST00000261007 IDI1Q13907 227 aa14.09□□□□□ -0.15
CHRNA1-201ENST00000261007 TSPOAP1O95153 1857 aa14.09□□□□□ -0.15
CHRNA1-201ENST00000261007 TRAK1Q9UPV9 953 aa14.08□□□□□ -0.16
CHRNA1-201ENST00000261007 EVC2Q86UK5 1308 aa14.08□□□□□ -0.16
CHRNA1-201ENST00000261007 NINLQ9Y2I6 1382 aa14.07□□□□□ -0.16
CHRNA1-201ENST00000261007 NFKBIBQ15653 356 aa14.07□□□□□ -0.16
CHRNA1-201ENST00000261007 ARHGEF40Q8TER5 1519 aa14.07□□□□□ -0.16
CHRNA1-201ENST00000261007 NGEFQ8N5V2 710 aa14.07□□□□□ -0.16
CHRNA1-201ENST00000261007 UBE2Q2Q8WVN8 375 aa14.07□□□□□ -0.16
CHRNA1-201ENST00000261007 SPATA31D1Q6ZQQ2 1576 aa14.05□□□□□ -0.16
CHRNA1-201ENST00000261007 MYO5BQ9ULV0 1848 aa14.04□□□□□ -0.16
CHRNA1-201ENST00000261007 NSD2O96028 1365 aa14.04□□□□□ -0.16
CHRNA1-201ENST00000261007 CLTCQ00610 1675 aaKnown RBP14.03□□□□□ -0.16
CHRNA1-201ENST00000261007 DAXXQ9UER7 740 aaPredicted RBP14.03□□□□□ -0.16
CHRNA1-201ENST00000261007 BRPF3Q9ULD4 1205 aa14.03□□□□□ -0.16
CHRNA1-201ENST00000261007 ADAMTS8Q9UP79 889 aa14.03□□□□□ -0.16
CHRNA1-201ENST00000261007 KIF13AQ9H1H9 1805 aa14.03□□□□□ -0.16
CHRNA1-201ENST00000261007 POLR3AO14802 1390 aaPredicted RBP14.03□□□□□ -0.16
CHRNA1-201ENST00000261007 TMEM132EQ6IEE7 984 aa14.02□□□□□ -0.16
CHRNA1-201ENST00000261007 CARD14Q9BXL6 1004 aa14.02□□□□□ -0.16
CHRNA1-201ENST00000261007 KDM2BQ8NHM5 1336 aa14.02□□□□□ -0.16
CHRNA1-201ENST00000261007 NSD3Q9BZ95 1437 aa14.02□□□□□ -0.17
CHRNA1-201ENST00000261007 CRBNQ96SW2 442 aa14.02□□□□□ -0.17
CHRNA1-201ENST00000261007 ANKRD36BQ8N2N9 1353 aa14.01□□□□□ -0.17
CHRNA1-201ENST00000261007 TULP4Q9NRJ4 1543 aa14.01□□□□□ -0.17
CHRNA1-201ENST00000261007 SENP3-EIF4A1A0A087X0R7 540 aa14.01□□□□□ -0.17
CHRNA1-201ENST00000261007 CENPQQ7L2Z9 268 aaPredicted RBP14.01□□□□□ -0.17
CHRNA1-201ENST00000261007 FRAT1Q92837 279 aaPredicted RBP14.01□□□□□ -0.17
CHRNA1-201ENST00000261007 CGNL1Q0VF96 1302 aa14□□□□□ -0.17
CHRNA1-201ENST00000261007 FAM161AQ3B820 660 aa14□□□□□ -0.17
CHRNA1-201ENST00000261007 ZBTB4Q9P1Z0 1013 aaPredicted RBP14□□□□□ -0.17
CHRNA1-201ENST00000261007 STAG3Q9UJ98 1225 aa14□□□□□ -0.17
CHRNA1-201ENST00000261007 ATAD2Q6PL18 1390 aa14□□□□□ -0.17
CHRNA1-201ENST00000261007 ALKQ9UM73 1620 aa13.99□□□□□ -0.17
CHRNA1-201ENST00000261007 DLC1Q96QB1 1528 aa13.98□□□□□ -0.17
CHRNA1-201ENST00000261007 PTPRMP28827 1452 aa13.98□□□□□ -0.17
CHRNA1-201ENST00000261007 YTHDC2Q9H6S0 1430 aaKnown RBP13.98□□□□□ -0.17
CHRNA1-201ENST00000261007 FAM43AQ8N2R8 423 aa13.98□□□□□ -0.17
CHRNA1-201ENST00000261007 CDCA7LQ96GN5 454 aa13.98□□□□□ -0.17
CHRNA1-201ENST00000261007 MORC1Q86VD1 984 aa13.98□□□□□ -0.17
CHRNA1-201ENST00000261007 RSPH6AQ9H0K4 717 aa13.98□□□□□ -0.17
CHRNA1-201ENST00000261007 A2ML1A8K2U0 1454 aa13.97□□□□□ -0.17
CHRNA1-201ENST00000261007 ZNF521Q96K83 1311 aa13.96□□□□□ -0.17
CHRNA1-201ENST00000261007 FBXO31Q5XUX0 539 aaPredicted RBP13.96□□□□□ -0.17
CHRNA1-201ENST00000261007 SLC12A5Q9H2X9 1139 aa13.96□□□□□ -0.17
CHRNA1-201ENST00000261007 GOLGA2Q08379 1002 aa13.96□□□□□ -0.18
CHRNA1-201ENST00000261007 NUTM2DQ5VT03 806 aaPredicted RBP13.96□□□□□ -0.18
CHRNA1-201ENST00000261007 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.96□□□□□ -0.18
CHRNA1-201ENST00000261007 ESF1Q9H501 851 aaKnown RBP13.96□□□□□ -0.18
CHRNA1-201ENST00000261007 PLIN1O60240 522 aa13.95□□□□□ -0.18
CHRNA1-201ENST00000261007 CFAP53Q96M91 514 aa13.95□□□□□ -0.18
CHRNA1-201ENST00000261007 HDGFP51858 240 aaKnown RBP13.94□□□□□ -0.18
CHRNA1-201ENST00000261007 C8orf34Q49A92 452 aa13.94□□□□□ -0.18
CHRNA1-201ENST00000261007 RIMS2Q9UQ26 1411 aa13.94□□□□□ -0.18
CHRNA1-201ENST00000261007 PLEKHH1Q9ULM0 1364 aa13.94□□□□□ -0.18
CHRNA1-201ENST00000261007 MED14O60244 1454 aa13.93□□□□□ -0.18
CHRNA1-201ENST00000261007 ADRA2BP18089 450 aa13.93□□□□□ -0.18
CHRNA1-201ENST00000261007 NCBP3Q53F19 620 aaKnown RBP13.93□□□□□ -0.18
CHRNA1-201ENST00000261007 POGKQ9P215 609 aa13.93□□□□□ -0.18
CHRNA1-201ENST00000261007 TERF2IPQ9NYB0 399 aa13.92□□□□□ -0.18
CHRNA1-201ENST00000261007 ABCC11Q96J66 1382 aa13.92□□□□□ -0.18
CHRNA1-201ENST00000261007 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.92□□□□□ -0.18
CHRNA1-201ENST00000261007 SRPK2P78362 688 aaKnown RBP13.91□□□□□ -0.18
CHRNA1-201ENST00000261007 SHPRHQ149N8 1683 aa13.91□□□□□ -0.18
CHRNA1-201ENST00000261007 SETD1AO15047 1707 aaKnown RBP13.91□□□□□ -0.18
CHRNA1-201ENST00000261007 ANKRD26Q9UPS8 1709 aa13.91□□□□□ -0.18
CHRNA1-201ENST00000261007 ZMYM3Q14202 1370 aa13.91□□□□□ -0.18
CHRNA1-201ENST00000261007 SLC4A3P48751 1232 aa13.91□□□□□ -0.18
CHRNA1-201ENST00000261007 DUSP27Q5VZP5 1158 aa13.91□□□□□ -0.18
CHRNA1-201ENST00000261007 PRAM1Q96QH2 718 aa13.91□□□□□ -0.18
CHRNA1-201ENST00000261007 STK26Q9P289 416 aa13.91□□□□□ -0.18
CHRNA1-201ENST00000261007 E9PSI1 815 aa13.9□□□□□ -0.18
CHRNA1-201ENST00000261007 SLFN5Q08AF3 891 aa13.9□□□□□ -0.18
CHRNA1-201ENST00000261007 CABP2Q9NPB3 220 aa13.9□□□□□ -0.18
CHRNA1-201ENST00000261007 TRMT2AQ8IZ69 625 aaKnown RBP13.89□□□□□ -0.19
CHRNA1-201ENST00000261007 VIRMAQ69YN4 1812 aaKnown RBP13.89□□□□□ -0.19
CHRNA1-201ENST00000261007 FRAT2O75474 233 aaPredicted RBP13.89□□□□□ -0.19
CHRNA1-201ENST00000261007 C20orf194Q5TEA3 1177 aa13.89□□□□□ -0.19
CHRNA1-201ENST00000261007 HDGFL2Q7Z4V5 671 aaPredicted RBP13.89□□□□□ -0.19
CHRNA1-201ENST00000261007 SKAP1Q86WV1 359 aa13.89□□□□□ -0.19
CHRNA1-201ENST00000261007 A0A1W2PP64 1363 aa13.88□□□□□ -0.19
CHRNA1-201ENST00000261007 KNDC1Q76NI1 1749 aa13.88□□□□□ -0.19
CHRNA1-201ENST00000261007 APAF1O14727 1248 aa13.88□□□□□ -0.19
CHRNA1-201ENST00000261007 RUNDC1Q96C34 613 aa13.88□□□□□ -0.19
CHRNA1-201ENST00000261007 SIRT1Q96EB6 747 aa13.88□□□□□ -0.19
CHRNA1-201ENST00000261007 NKTRP30414 1462 aaKnown RBP13.88□□□□□ -0.19
CHRNA1-201ENST00000261007 TNRQ92752 1358 aa13.88□□□□□ -0.19
CHRNA1-201ENST00000261007 ATP7BP35670 1465 aa13.87□□□□□ -0.19
CHRNA1-201ENST00000261007 MLECQ14165 292 aa13.87□□□□□ -0.19
CHRNA1-201ENST00000261007 MINK1Q8N4C8 1332 aaPredicted RBP13.87□□□□□ -0.19
CHRNA1-201ENST00000261007 CCDC146Q8IYE0 955 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms