RNA–Protein interactions for RNA: ENST00000259803.7

GCM1-201, Transcript of glial cells missing homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCM1, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1-201ENST00000259803 DIP2CQ9Y2E4 1556 aa13.78□□□□□ -0.2
GCM1-201ENST00000259803 YY1AP1Q9H869 796 aa13.78□□□□□ -0.2
GCM1-201ENST00000259803 RRAGDQ9NQL2 400 aaPredicted RBP13.78□□□□□ -0.2
GCM1-201ENST00000259803 TCERG1O14776 1098 aaKnown RBP13.77□□□□□ -0.2
GCM1-201ENST00000259803 ADGRL2O95490 1459 aa13.77□□□□□ -0.21
GCM1-201ENST00000259803 A2MP01023 1474 aa13.77□□□□□ -0.21
GCM1-201ENST00000259803 ROCK1Q13464 1354 aa13.77□□□□□ -0.21
GCM1-201ENST00000259803 CLCN1P35523 988 aa13.77□□□□□ -0.21
GCM1-201ENST00000259803 CDCA8Q53HL2 280 aa13.77□□□□□ -0.21
GCM1-201ENST00000259803 LAS1LQ9Y4W2 734 aaKnown RBP13.76□□□□□ -0.21
GCM1-201ENST00000259803 RTEL1-TNFRSF6BF6WH68 1400 aa13.76□□□□□ -0.21
GCM1-201ENST00000259803 DHX29Q7Z478 1369 aaKnown RBP13.76□□□□□ -0.21
GCM1-201ENST00000259803 GEMIN8Q9NWZ8 242 aaKnown RBP13.76□□□□□ -0.21
GCM1-201ENST00000259803 KDM4AO75164 1064 aa13.75□□□□□ -0.21
GCM1-201ENST00000259803 HSP90AB3PQ58FF7 597 aa13.75□□□□□ -0.21
GCM1-201ENST00000259803 SEMA3FQ13275 785 aa13.74□□□□□ -0.21
GCM1-201ENST00000259803 NGEFQ8N5V2 710 aa13.74□□□□□ -0.21
GCM1-201ENST00000259803 ZMYM4Q5VZL5 1548 aa13.74□□□□□ -0.21
GCM1-201ENST00000259803 NUP155O75694 1391 aa13.74□□□□□ -0.21
GCM1-201ENST00000259803 ADGBQ8N7X0 1667 aa13.74□□□□□ -0.21
GCM1-201ENST00000259803 ATP10AO60312 1499 aa13.73□□□□□ -0.21
GCM1-201ENST00000259803 E9PSI1 815 aa13.73□□□□□ -0.21
GCM1-201ENST00000259803 MAST1Q9Y2H9 1570 aa13.73□□□□□ -0.21
GCM1-201ENST00000259803 CEBPAP49715 358 aaPredicted RBP13.72□□□□□ -0.21
GCM1-201ENST00000259803 IRF6O14896 467 aa13.71□□□□□ -0.21
GCM1-201ENST00000259803 ARHGEF40Q8TER5 1519 aa13.71□□□□□ -0.21
GCM1-201ENST00000259803 PLXNC1O60486 1568 aa13.71□□□□□ -0.22
GCM1-201ENST00000259803 DUOX2Q9NRD8 1548 aa13.71□□□□□ -0.22
GCM1-201ENST00000259803 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.71□□□□□ -0.22
GCM1-201ENST00000259803 CASC1Q6TDU7 716 aa13.7□□□□□ -0.22
GCM1-201ENST00000259803 MAGI2Q86UL8 1455 aa13.69□□□□□ -0.22
GCM1-201ENST00000259803 NBPF9Q3BBW0 867 aa13.69□□□□□ -0.22
GCM1-201ENST00000259803 RAD21O60216 631 aa13.68□□□□□ -0.22
GCM1-201ENST00000259803 EXOC8Q8IYI6 725 aa13.68□□□□□ -0.22
GCM1-201ENST00000259803 MPHOSPH9Q99550 1183 aa13.68□□□□□ -0.22
GCM1-201ENST00000259803 LETM1O95202 739 aaPredicted RBP13.68□□□□□ -0.22
GCM1-201ENST00000259803 PKD2Q13563 968 aa13.68□□□□□ -0.22
GCM1-201ENST00000259803 FBXO31Q5XUX0 539 aaPredicted RBP13.68□□□□□ -0.22
GCM1-201ENST00000259803 GCC2Q8IWJ2 1684 aa13.67□□□□□ -0.22
GCM1-201ENST00000259803 ERBINQ96RT1 1412 aa13.67□□□□□ -0.22
GCM1-201ENST00000259803 SENP3Q9H4L4 574 aaPredicted RBP13.66□□□□□ -0.22
GCM1-201ENST00000259803 RBM25P49756 843 aaKnown RBP13.66□□□□□ -0.22
GCM1-201ENST00000259803 OTUD6BQ8N6M0 293 aa13.66□□□□□ -0.22
GCM1-201ENST00000259803 SIN3AQ96ST3 1273 aa13.66□□□□□ -0.22
GCM1-201ENST00000259803 GTPBP4Q9BZE4 634 aaKnown RBP13.66□□□□□ -0.22
GCM1-201ENST00000259803 CFAP65Q6ZU64 1925 aaKnown RBP13.65□□□□□ -0.22
GCM1-201ENST00000259803 MPNDQ8N594 471 aa13.65□□□□□ -0.22
GCM1-201ENST00000259803 DHX57Q6P158 1386 aaKnown RBP13.65□□□□□ -0.22
GCM1-201ENST00000259803 GOLGA6L3A6NEY3 463 aa13.65□□□□□ -0.22
GCM1-201ENST00000259803 PZPP20742 1482 aa13.64□□□□□ -0.23
GCM1-201ENST00000259803 MTERF4Q7Z6M4 381 aaKnown RBP13.64□□□□□ -0.23
GCM1-201ENST00000259803 SGSM3Q96HU1 749 aa13.64□□□□□ -0.23
GCM1-201ENST00000259803 MROH1Q8NDA8 1641 aa13.64□□□□□ -0.23
GCM1-201ENST00000259803 FRAT1Q92837 279 aaPredicted RBP13.64□□□□□ -0.23
GCM1-201ENST00000259803 TSHZ1Q6ZSZ6 1077 aa13.63□□□□□ -0.23
GCM1-201ENST00000259803 KCTD17Q8N5Z5 321 aa13.63□□□□□ -0.23
GCM1-201ENST00000259803 RINLQ6ZS11 566 aa13.62□□□□□ -0.23
GCM1-201ENST00000259803 DCAF11Q8TEB1 546 aa13.62□□□□□ -0.23
GCM1-201ENST00000259803 ESF1Q9H501 851 aaKnown RBP13.61□□□□□ -0.23
GCM1-201ENST00000259803 MTMR7Q9Y216 660 aa13.61□□□□□ -0.23
GCM1-201ENST00000259803 FAM135AQ9P2D6 1515 aa13.61□□□□□ -0.23
GCM1-201ENST00000259803 KDM4FA0A1W2PPD8 638 aa13.61□□□□□ -0.23
GCM1-201ENST00000259803 ZNF500O60304 480 aaPredicted RBP13.61□□□□□ -0.23
GCM1-201ENST00000259803 TERF2IPQ9NYB0 399 aa13.61□□□□□ -0.23
GCM1-201ENST00000259803 MAP2K1Q02750 393 aaPredicted RBP13.6□□□□□ -0.23
GCM1-201ENST00000259803 AEBP1Q8IUX7 1158 aa13.6□□□□□ -0.23
GCM1-201ENST00000259803 BANK1Q8NDB2 785 aa13.6□□□□□ -0.23
GCM1-201ENST00000259803 CCDC96Q2M329 555 aa13.6□□□□□ -0.23
GCM1-201ENST00000259803 RAI14Q9P0K7 980 aa13.59□□□□□ -0.23
GCM1-201ENST00000259803 ARID4AP29374 1257 aaPredicted RBP13.58□□□□□ -0.24
GCM1-201ENST00000259803 CEP152O94986 1710 aa13.58□□□□□ -0.24
GCM1-201ENST00000259803 NPATQ14207 1427 aa13.57□□□□□ -0.24
GCM1-201ENST00000259803 KANK1Q14678 1352 aa13.57□□□□□ -0.24
GCM1-201ENST00000259803 LOC102724159A0A0B4J2E5 919 aa13.57□□□□□ -0.24
GCM1-201ENST00000259803 GOLIM4O00461 696 aa13.57□□□□□ -0.24
GCM1-201ENST00000259803 SATB1Q01826 763 aa13.57□□□□□ -0.24
GCM1-201ENST00000259803 PWP2Q15269 919 aaKnown RBP13.57□□□□□ -0.24
GCM1-201ENST00000259803 FOXD4L5Q5VV16 416 aaPredicted RBP13.57□□□□□ -0.24
GCM1-201ENST00000259803 NBPF10Q6P3W6 841 aaKnown RBP13.57□□□□□ -0.24
GCM1-201ENST00000259803 FOXD4L4Q8WXT5 416 aaPredicted RBP13.57□□□□□ -0.24
GCM1-201ENST00000259803 ZMYM3Q14202 1370 aa13.57□□□□□ -0.24
GCM1-201ENST00000259803 ZSCAN20P17040 1043 aaPredicted RBP13.57□□□□□ -0.24
GCM1-201ENST00000259803 ABCC3O15438 1527 aa13.57□□□□□ -0.24
GCM1-201ENST00000259803 UGGT1Q9NYU2 1555 aa13.56□□□□□ -0.24
GCM1-201ENST00000259803 PRDM15P57071 1507 aaPredicted RBP13.56□□□□□ -0.24
GCM1-201ENST00000259803 FOXD4L6Q3SYB3 417 aaPredicted RBP13.56□□□□□ -0.24
GCM1-201ENST00000259803 FOXD4L3Q6VB84 417 aaPredicted RBP13.56□□□□□ -0.24
GCM1-201ENST00000259803 SSR1P43307 286 aaKnown RBP13.56□□□□□ -0.24
GCM1-201ENST00000259803 AGLP35573 1532 aa13.56□□□□□ -0.24
GCM1-201ENST00000259803 PRR29P0C7W0 189 aa13.55□□□□□ -0.24
GCM1-201ENST00000259803 LMOD3Q0VAK6 560 aa13.55□□□□□ -0.24
GCM1-201ENST00000259803 NBPF6Q5VWK0 638 aa13.55□□□□□ -0.24
GCM1-201ENST00000259803 NBPF5PQ86XG9 351 aaPredicted RBP13.55□□□□□ -0.24
GCM1-201ENST00000259803 NBPF4Q96M43 638 aa13.55□□□□□ -0.24
GCM1-201ENST00000259803 UNC13BO14795 1591 aa13.55□□□□□ -0.24
GCM1-201ENST00000259803 CLTCQ00610 1675 aaKnown RBP13.55□□□□□ -0.24
GCM1-201ENST00000259803 DEPDC5O75140 1603 aa13.55□□□□□ -0.24
GCM1-201ENST00000259803 MADDQ8WXG6 1647 aa13.55□□□□□ -0.24
GCM1-201ENST00000259803 RGL3Q3MIN7 710 aa13.55□□□□□ -0.24
GCM1-201ENST00000259803 NUTM2DQ5VT03 806 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms