RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 SLAIN2Q9P270 581 aa24.38■■□□□ 1.49
SRSF1-201ENST00000258962 PTCH1Q13635 1447 aa24.38■■□□□ 1.49
SRSF1-201ENST00000258962 ROBO2Q9HCK4 1378 aa24.37■■□□□ 1.49
SRSF1-201ENST00000258962 ABCC11Q96J66 1382 aa24.36■■□□□ 1.49
SRSF1-201ENST00000258962 KIF7Q2M1P5 1343 aa24.34■■□□□ 1.49
SRSF1-201ENST00000258962 YTHDC2Q9H6S0 1430 aaKnown RBP24.34■■□□□ 1.49
SRSF1-201ENST00000258962 ST20-MTHFSA0A0A6YYL1 179 aa24.34■■□□□ 1.49
SRSF1-201ENST00000258962 HSPA1LP34931 641 aa24.31■■□□□ 1.48
SRSF1-201ENST00000258962 FAM135BQ49AJ0 1406 aa24.31■■□□□ 1.48
SRSF1-201ENST00000258962 ADGRL3Q9HAR2 1447 aa24.31■■□□□ 1.48
SRSF1-201ENST00000258962 ASXL1Q8IXJ9 1541 aa24.31■■□□□ 1.48
SRSF1-201ENST00000258962 TECPR2O15040 1411 aa24.3■■□□□ 1.48
SRSF1-201ENST00000258962 WAPLQ7Z5K2 1190 aa24.3■■□□□ 1.48
SRSF1-201ENST00000258962 SIRT1Q96EB6 747 aa24.3■■□□□ 1.48
SRSF1-201ENST00000258962 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.3■■□□□ 1.48
SRSF1-201ENST00000258962 DCCP43146 1447 aa24.3■■□□□ 1.48
SRSF1-201ENST00000258962 POGKQ9P215 609 aa24.26■■□□□ 1.47
SRSF1-201ENST00000258962 TRAK1Q9UPV9 953 aa24.26■■□□□ 1.47
SRSF1-201ENST00000258962 ADGRB1O14514 1584 aa24.24■■□□□ 1.47
SRSF1-201ENST00000258962 PRAM1Q96QH2 718 aa24.24■■□□□ 1.47
SRSF1-201ENST00000258962 PLEKHH1Q9ULM0 1364 aa24.23■■□□□ 1.47
SRSF1-201ENST00000258962 KNDC1Q76NI1 1749 aa24.22■■□□□ 1.47
SRSF1-201ENST00000258962 SAFB2Q14151 953 aaKnown RBP eCLIP24.22■■□□□ 1.47
SRSF1-201ENST00000258962 TESK2Q96S53 571 aa24.22■■□□□ 1.47
SRSF1-201ENST00000258962 NALCNQ8IZF0 1738 aa24.22■■□□□ 1.47
SRSF1-201ENST00000258962 ROBO1Q9Y6N7 1651 aa24.2■■□□□ 1.46
SRSF1-201ENST00000258962 MST1RQ04912 1400 aa24.19■■□□□ 1.46
SRSF1-201ENST00000258962 DLC1Q96QB1 1528 aa24.19■■□□□ 1.46
SRSF1-201ENST00000258962 BRINP3Q76B58 766 aa24.18■■□□□ 1.46
SRSF1-201ENST00000258962 DISP3Q9P2K9 1392 aa24.17■■□□□ 1.46
SRSF1-201ENST00000258962 EIF3AQ14152 1382 aaKnown RBP24.16■■□□□ 1.46
SRSF1-201ENST00000258962 C1orf167Q5SNV9 1468 aa24.14■■□□□ 1.45
SRSF1-201ENST00000258962 POLR3GLQ9BT43 218 aa24.13■■□□□ 1.45
SRSF1-201ENST00000258962 ARHGEF28Q8N1W1 1705 aaKnown RBP24.13■■□□□ 1.45
SRSF1-201ENST00000258962 CDC42BPGQ6DT37 1551 aa24.12■■□□□ 1.45
SRSF1-201ENST00000258962 NUTM2FA1L443 756 aa24.12■■□□□ 1.45
SRSF1-201ENST00000258962 ANP32CO43423 234 aa24.12■■□□□ 1.45
SRSF1-201ENST00000258962 ORAI2Q96SN7 254 aa24.11■■□□□ 1.45
SRSF1-201ENST00000258962 MINK1Q8N4C8 1332 aaPredicted RBP24.11■■□□□ 1.45
SRSF1-201ENST00000258962 ESCO1Q5FWF5 840 aa24.1■■□□□ 1.45
SRSF1-201ENST00000258962 QRICH2Q9H0J4 1663 aa24.1■■□□□ 1.45
SRSF1-201ENST00000258962 TMF1P82094 1093 aa24.09■■□□□ 1.45
SRSF1-201ENST00000258962 PHLPP1O60346 1717 aa24.07■■□□□ 1.44
SRSF1-201ENST00000258962 SBNO2Q9Y2G9 1366 aa24.05■■□□□ 1.44
SRSF1-201ENST00000258962 MYOM1P52179 1685 aa24.04■■□□□ 1.44
SRSF1-201ENST00000258962 DDX17Q92841 729 aaKnown RBP24.04■■□□□ 1.44
SRSF1-201ENST00000258962 AHDC1Q5TGY3 1603 aaPredicted RBP24.04■■□□□ 1.44
SRSF1-201ENST00000258962 CENPJQ9HC77 1338 aaPredicted RBP24.03■■□□□ 1.44
SRSF1-201ENST00000258962 WASLO00401 505 aaPredicted RBP24.03■■□□□ 1.44
SRSF1-201ENST00000258962 JCADQ9P266 1359 aa24.02■■□□□ 1.44
SRSF1-201ENST00000258962 CCER2I3L3R5 266 aa24.01■■□□□ 1.43
SRSF1-201ENST00000258962 LRRC59Q96AG4 307 aaKnown RBP24.01■■□□□ 1.43
SRSF1-201ENST00000258962 FMN2Q9NZ56 1722 aa24.01■■□□□ 1.43
SRSF1-201ENST00000258962 NPHP3Q7Z494 1330 aa24■■□□□ 1.43
SRSF1-201ENST00000258962 FOXO3O43524 673 aa24■■□□□ 1.43
SRSF1-201ENST00000258962 ADGRB2O60241 1585 aa23.99■■□□□ 1.43
SRSF1-201ENST00000258962 PHF8Q9UPP1 1060 aa23.98■■□□□ 1.43
SRSF1-201ENST00000258962 COL16A1Q07092 1604 aaPredicted RBP23.98■■□□□ 1.43
SRSF1-201ENST00000258962 CDK19Q9BWU1 502 aa23.97■■□□□ 1.43
SRSF1-201ENST00000258962 PRKRIP1Q9H875 184 aaPredicted RBP23.97■■□□□ 1.43
SRSF1-201ENST00000258962 ANKARQ7Z5J8 1434 aa23.97■■□□□ 1.43
SRSF1-201ENST00000258962 NHSL1Q5SYE7 1610 aa23.96■■□□□ 1.43
SRSF1-201ENST00000258962 CDCA8Q53HL2 280 aa23.95■■□□□ 1.43
SRSF1-201ENST00000258962 SOS2Q07890 1332 aaPredicted RBP23.95■■□□□ 1.42
SRSF1-201ENST00000258962 SLC24A1O60721 1099 aa23.94■■□□□ 1.42
SRSF1-201ENST00000258962 YTHDC1Q96MU7 727 aaKnown RBP23.94■■□□□ 1.42
SRSF1-201ENST00000258962 XPCQ01831 940 aaPredicted RBP23.93■■□□□ 1.42
SRSF1-201ENST00000258962 NUDT16Q96DE0 195 aaKnown RBP23.93■■□□□ 1.42
SRSF1-201ENST00000258962 TULP4Q9NRJ4 1543 aa23.92■■□□□ 1.42
SRSF1-201ENST00000258962 SRPK2P78362 688 aaKnown RBP23.92■■□□□ 1.42
SRSF1-201ENST00000258962 PMFBP1Q8TBY8 1022 aa23.92■■□□□ 1.42
SRSF1-201ENST00000258962 SPATA31A6Q5VVP1 1343 aa23.92■■□□□ 1.42
SRSF1-201ENST00000258962 PSME1Q06323 249 aa23.91■■□□□ 1.42
SRSF1-201ENST00000258962 PRR36Q9H6K5 1346 aa23.91■■□□□ 1.42
SRSF1-201ENST00000258962 KRT28Q7Z3Y7 464 aa23.9■■□□□ 1.42
SRSF1-201ENST00000258962 PHF23Q9BUL5 403 aaPredicted RBP23.9■■□□□ 1.42
SRSF1-201ENST00000258962 RGPD8O14715 1765 aaPredicted RBP23.9■■□□□ 1.42
SRSF1-201ENST00000258962 MED1Q15648 1581 aaPredicted RBP23.89■■□□□ 1.42
SRSF1-201ENST00000258962 KIF1AQ12756 1690 aa23.89■■□□□ 1.42
SRSF1-201ENST00000258962 PER1O15534 1290 aaPredicted RBP23.89■■□□□ 1.41
SRSF1-201ENST00000258962 EVC2Q86UK5 1308 aa23.89■■□□□ 1.41
SRSF1-201ENST00000258962 NGDNQ8NEJ9 315 aaKnown RBP23.88■■□□□ 1.41
SRSF1-201ENST00000258962 PANK3Q9H999 370 aa23.88■■□□□ 1.41
SRSF1-201ENST00000258962 CCDC61Q9Y6R9 512 aa23.88■■□□□ 1.41
SRSF1-201ENST00000258962 NUTM2BA6NNL0 878 aaPredicted RBP23.87■■□□□ 1.41
SRSF1-201ENST00000258962 NUTM2EB1AL46 878 aaPredicted RBP23.87■■□□□ 1.41
SRSF1-201ENST00000258962 NUTM2AQ8IVF1 878 aaPredicted RBP23.87■■□□□ 1.41
SRSF1-201ENST00000258962 CABP2Q9NPB3 220 aa23.86■■□□□ 1.41
SRSF1-201ENST00000258962 USP32Q8NFA0 1604 aa23.86■■□□□ 1.41
SRSF1-201ENST00000258962 PNPLA6Q8IY17 1366 aa23.85■■□□□ 1.41
SRSF1-201ENST00000258962 PXDNQ92626 1479 aa23.85■■□□□ 1.41
SRSF1-201ENST00000258962 CENPBP07199 599 aaPredicted RBP23.84■■□□□ 1.41
SRSF1-201ENST00000258962 MEX3CQ5U5Q3 659 aaKnown RBP23.84■■□□□ 1.41
SRSF1-201ENST00000258962 SHPRHQ149N8 1683 aa23.84■■□□□ 1.41
SRSF1-201ENST00000258962 ATP7BP35670 1465 aa23.83■■□□□ 1.4
SRSF1-201ENST00000258962 CCDC184Q52MB2 194 aa23.82■■□□□ 1.4
SRSF1-201ENST00000258962 SPATA31A3Q5VYP0 1347 aa23.81■■□□□ 1.4
SRSF1-201ENST00000258962 LMOD2Q6P5Q4 547 aa23.81■■□□□ 1.4
SRSF1-201ENST00000258962 KTN1Q86UP2 1357 aaKnown RBP23.8■■□□□ 1.4
SRSF1-201ENST00000258962 PLEKHG3A1L390 1219 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms